RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 ADGRB3O60242 1522 aa25.68■■□□□ 1.7
PKD1-208ENST00000472577 RPRD2Q5VT52 1461 aaKnown RBP25.67■■□□□ 1.7
PKD1-208ENST00000472577 NOS1P29475 1434 aa25.67■■□□□ 1.7
PKD1-208ENST00000472577 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
PKD1-208ENST00000472577 IDI1Q13907 227 aa25.67■■□□□ 1.7
PKD1-208ENST00000472577 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
PKD1-208ENST00000472577 STAG3Q9UJ98 1225 aa25.64■■□□□ 1.7
PKD1-208ENST00000472577 TMEM94Q12767 1356 aa25.61■■□□□ 1.69
PKD1-208ENST00000472577 NWD1Q149M9 1564 aa25.6■■□□□ 1.69
PKD1-208ENST00000472577 SLC26A8Q96RN1 970 aa25.59■■□□□ 1.69
PKD1-208ENST00000472577 SLC4A1APQ9BWU0 796 aaKnown RBP25.58■■□□□ 1.69
PKD1-208ENST00000472577 RBM33Q96EV2 1170 aaKnown RBP25.57■■□□□ 1.68
PKD1-208ENST00000472577 MYO5BQ9ULV0 1848 aa25.57■■□□□ 1.68
PKD1-208ENST00000472577 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
PKD1-208ENST00000472577 ROBO1Q9Y6N7 1651 aa25.56■■□□□ 1.68
PKD1-208ENST00000472577 HRCP23327 699 aa25.56■■□□□ 1.68
PKD1-208ENST00000472577 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
PKD1-208ENST00000472577 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
PKD1-208ENST00000472577 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
PKD1-208ENST00000472577 KCNA6P17658 529 aa25.54■■□□□ 1.68
PKD1-208ENST00000472577 RGS17Q9UGC6 210 aaPredicted RBP25.53■■□□□ 1.68
PKD1-208ENST00000472577 SPHKAPQ2M3C7 1700 aa25.53■■□□□ 1.68
PKD1-208ENST00000472577 ZFYVE9O95405 1425 aa25.53■■□□□ 1.68
PKD1-208ENST00000472577 TMEM131LA2VDJ0 1609 aa25.5■■□□□ 1.67
PKD1-208ENST00000472577 FOXD1Q16676 465 aa25.49■■□□□ 1.67
PKD1-208ENST00000472577 PROSER2Q86WR7 435 aaPredicted RBP25.49■■□□□ 1.67
PKD1-208ENST00000472577 SLC52A1Q9NWF4 448 aa25.49■■□□□ 1.67
PKD1-208ENST00000472577 TRPM2O94759 1503 aa25.47■■□□□ 1.67
PKD1-208ENST00000472577 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
PKD1-208ENST00000472577 PLEKHG1Q9ULL1 1385 aa25.45■■□□□ 1.67
PKD1-208ENST00000472577 CHD2O14647 1828 aaKnown RBP25.45■■□□□ 1.66
PKD1-208ENST00000472577 CLTCL1P53675 1640 aa25.43■■□□□ 1.66
PKD1-208ENST00000472577 BCANQ96GW7 911 aa25.42■■□□□ 1.66
PKD1-208ENST00000472577 MSH6P52701 1360 aa25.41■■□□□ 1.66
PKD1-208ENST00000472577 PHLPP1O60346 1717 aa25.39■■□□□ 1.65
PKD1-208ENST00000472577 PPP1R15AO75807 674 aaPredicted RBP25.37■■□□□ 1.65
PKD1-208ENST00000472577 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
PKD1-208ENST00000472577 POTEAQ6S8J7 498 aa25.36■■□□□ 1.65
PKD1-208ENST00000472577 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
PKD1-208ENST00000472577 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
PKD1-208ENST00000472577 COL16A1Q07092 1604 aaPredicted RBP25.34■■□□□ 1.65
PKD1-208ENST00000472577 NUTM2DQ5VT03 806 aaPredicted RBP25.34■■□□□ 1.65
PKD1-208ENST00000472577 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
PKD1-208ENST00000472577 DIP2AQ14689 1571 aa25.32■■□□□ 1.64
PKD1-208ENST00000472577 KIF1BO60333 1816 aa25.31■■□□□ 1.64
PKD1-208ENST00000472577 CCDC144AA2RUR9 1427 aa25.3■■□□□ 1.64
PKD1-208ENST00000472577 TBX22Q9Y458 520 aa25.3■■□□□ 1.64
PKD1-208ENST00000472577 ANKRD30BQ9BXX2 1392 aa25.3■■□□□ 1.64
PKD1-208ENST00000472577 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.29■■□□□ 1.64
PKD1-208ENST00000472577 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
PKD1-208ENST00000472577 JCADQ9P266 1359 aa25.27■■□□□ 1.64
PKD1-208ENST00000472577 HDGFP51858 240 aaKnown RBP25.26■■□□□ 1.63
PKD1-208ENST00000472577 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.26■■□□□ 1.63
PKD1-208ENST00000472577 LRP6O75581 1613 aa25.26■■□□□ 1.63
PKD1-208ENST00000472577 PTPRUQ92729 1446 aa25.25■■□□□ 1.63
PKD1-208ENST00000472577 NCOA3Q9Y6Q9 1424 aa25.25■■□□□ 1.63
PKD1-208ENST00000472577 NRXN3Q9Y4C0 1643 aa25.25■■□□□ 1.63
PKD1-208ENST00000472577 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
PKD1-208ENST00000472577 DHX57Q6P158 1386 aaKnown RBP25.23■■□□□ 1.63
PKD1-208ENST00000472577 PIK3R4Q99570 1358 aa25.22■■□□□ 1.63
PKD1-208ENST00000472577 SPATA31E1Q6ZUB1 1445 aa25.21■■□□□ 1.63
PKD1-208ENST00000472577 XRN1Q8IZH2 1706 aaKnown RBP25.21■■□□□ 1.63
PKD1-208ENST00000472577 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
PKD1-208ENST00000472577 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
PKD1-208ENST00000472577 NEXMIFQ5QGS0 1516 aa25.2■■□□□ 1.62
PKD1-208ENST00000472577 SHPRHQ149N8 1683 aa25.18■■□□□ 1.62
PKD1-208ENST00000472577 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
PKD1-208ENST00000472577 C19orf44Q9H6X5 657 aa25.16■■□□□ 1.62
PKD1-208ENST00000472577 CADPS2Q86UW7 1296 aa25.15■■□□□ 1.62
PKD1-208ENST00000472577 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
PKD1-208ENST00000472577 RGL3Q3MIN7 710 aa25.14■■□□□ 1.62
PKD1-208ENST00000472577 PPLO60437 1756 aa25.13■■□□□ 1.61
PKD1-208ENST00000472577 ATF3P18847 181 aa25.13■■□□□ 1.61
PKD1-208ENST00000472577 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
PKD1-208ENST00000472577 RPGRIP1LQ68CZ1 1315 aa25.12■■□□□ 1.61
PKD1-208ENST00000472577 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
PKD1-208ENST00000472577 ASXL1Q8IXJ9 1541 aa25.11■■□□□ 1.61
PKD1-208ENST00000472577 DCCP43146 1447 aa25.11■■□□□ 1.61
PKD1-208ENST00000472577 IFT172Q9UG01 1749 aa25.1■■□□□ 1.61
PKD1-208ENST00000472577 METP08581 1390 aa25.09■■□□□ 1.61
PKD1-208ENST00000472577 MST1RQ04912 1400 aa25.08■■□□□ 1.61
PKD1-208ENST00000472577 NHSL1Q5SYE7 1610 aa25.08■■□□□ 1.6
PKD1-208ENST00000472577 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
PKD1-208ENST00000472577 VGFO15240 615 aaPredicted RBP25.05■■□□□ 1.6
PKD1-208ENST00000472577 MEX3CQ5U5Q3 659 aaKnown RBP25.05■■□□□ 1.6
PKD1-208ENST00000472577 SIN3AQ96ST3 1273 aa25.05■■□□□ 1.6
PKD1-208ENST00000472577 ADGRF5Q8IZF2 1346 aa25.02■■□□□ 1.6
PKD1-208ENST00000472577 ADGRL3Q9HAR2 1447 aa25.02■■□□□ 1.6
PKD1-208ENST00000472577 MYOM2P54296 1465 aa24.98■■□□□ 1.59
PKD1-208ENST00000472577 NUTM2BA6NNL0 878 aaPredicted RBP24.98■■□□□ 1.59
PKD1-208ENST00000472577 NUTM2EB1AL46 878 aaPredicted RBP24.98■■□□□ 1.59
PKD1-208ENST00000472577 ZNF772Q68DY9 489 aaPredicted RBP24.98■■□□□ 1.59
PKD1-208ENST00000472577 NUTM2AQ8IVF1 878 aaPredicted RBP24.98■■□□□ 1.59
PKD1-208ENST00000472577 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
PKD1-208ENST00000472577 DDX17Q92841 729 aaKnown RBP24.97■■□□□ 1.59
PKD1-208ENST00000472577 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
PKD1-208ENST00000472577 DCAF11Q8TEB1 546 aa24.95■■□□□ 1.58
PKD1-208ENST00000472577 PIK3C2GO75747 1445 aa24.95■■□□□ 1.58
PKD1-208ENST00000472577 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
PKD1-208ENST00000472577 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms