RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 YEATS2Q9ULM3 1422 aa17.87■□□□□ 0.45
SCAMP4-207ENST00000472442 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
SCAMP4-207ENST00000472442 ABCC3O15438 1527 aa17.85■□□□□ 0.45
SCAMP4-207ENST00000472442 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
SCAMP4-207ENST00000472442 DISP3Q9P2K9 1392 aa17.83■□□□□ 0.45
SCAMP4-207ENST00000472442 KIF1BO60333 1816 aa17.83■□□□□ 0.44
SCAMP4-207ENST00000472442 MROH2AA6NES4 1674 aa17.83■□□□□ 0.44
SCAMP4-207ENST00000472442 COL17A1Q9UMD9 1497 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-207ENST00000472442 CFAP65Q6ZU64 1925 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-207ENST00000472442 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-207ENST00000472442 IQGAP1P46940 1657 aa17.81■□□□□ 0.44
SCAMP4-207ENST00000472442 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
SCAMP4-207ENST00000472442 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
SCAMP4-207ENST00000472442 MYOM2P54296 1465 aa17.8■□□□□ 0.44
SCAMP4-207ENST00000472442 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
SCAMP4-207ENST00000472442 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
SCAMP4-207ENST00000472442 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
SCAMP4-207ENST00000472442 SIGLEC1Q9BZZ2 1709 aa17.79■□□□□ 0.44
SCAMP4-207ENST00000472442 ZMYM4Q5VZL5 1548 aa17.78■□□□□ 0.44
SCAMP4-207ENST00000472442 KIAA1210Q9ULL0 1709 aa17.77■□□□□ 0.43
SCAMP4-207ENST00000472442 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.43
SCAMP4-207ENST00000472442 NOS1P29475 1434 aa17.77■□□□□ 0.43
SCAMP4-207ENST00000472442 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-207ENST00000472442 CFAP70Q5T0N1 1121 aa17.76■□□□□ 0.43
SCAMP4-207ENST00000472442 NRXN1Q9ULB1 1477 aa17.76■□□□□ 0.43
SCAMP4-207ENST00000472442 TMF1P82094 1093 aa17.75■□□□□ 0.43
SCAMP4-207ENST00000472442 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-207ENST00000472442 CHGAP10645 457 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-207ENST00000472442 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-207ENST00000472442 SYNMO15061 1565 aa17.73■□□□□ 0.43
SCAMP4-207ENST00000472442 ARHGAP31Q2M1Z3 1444 aa17.73■□□□□ 0.43
SCAMP4-207ENST00000472442 IPO9Q96P70 1041 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-207ENST00000472442 ZC3H13Q5T200 1668 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-207ENST00000472442 PIK3C2BO00750 1634 aa17.72■□□□□ 0.43
SCAMP4-207ENST00000472442 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
SCAMP4-207ENST00000472442 RTL5Q5HYW3 569 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-207ENST00000472442 SMG6Q86US8 1419 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-207ENST00000472442 PPLO60437 1756 aa17.7■□□□□ 0.42
SCAMP4-207ENST00000472442 KIF13AQ9H1H9 1805 aa17.7■□□□□ 0.42
SCAMP4-207ENST00000472442 PANK3Q9H999 370 aa17.69■□□□□ 0.42
SCAMP4-207ENST00000472442 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-207ENST00000472442 KTN1Q86UP2 1357 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-207ENST00000472442 RALBP1Q15311 655 aa17.68■□□□□ 0.42
SCAMP4-207ENST00000472442 PIK3C2GO75747 1445 aa17.68■□□□□ 0.42
SCAMP4-207ENST00000472442 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
SCAMP4-207ENST00000472442 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 IDI1Q13907 227 aa17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 RPGRIP1LQ68CZ1 1315 aa17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 REREQ9P2R6 1566 aa17.66■□□□□ 0.42
SCAMP4-207ENST00000472442 RNF123Q5XPI4 1314 aa17.65■□□□□ 0.42
SCAMP4-207ENST00000472442 C14orf93Q9H972 538 aaKnown RBP17.64■□□□□ 0.42
SCAMP4-207ENST00000472442 ANO8Q9HCE9 1232 aaPredicted RBP17.64■□□□□ 0.42
SCAMP4-207ENST00000472442 SETBP1Q9Y6X0 1596 aa17.64■□□□□ 0.41
SCAMP4-207ENST00000472442 SENP3-EIF4A1A0A087X0R7 540 aa17.64■□□□□ 0.41
SCAMP4-207ENST00000472442 PREX1Q8TCU6 1659 aa17.63■□□□□ 0.41
SCAMP4-207ENST00000472442 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
SCAMP4-207ENST00000472442 AGLP35573 1532 aa17.63■□□□□ 0.41
SCAMP4-207ENST00000472442 NEXMIFQ5QGS0 1516 aa17.63■□□□□ 0.41
SCAMP4-207ENST00000472442 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
SCAMP4-207ENST00000472442 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
SCAMP4-207ENST00000472442 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
SCAMP4-207ENST00000472442 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
SCAMP4-207ENST00000472442 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
SCAMP4-207ENST00000472442 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
SCAMP4-207ENST00000472442 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
SCAMP4-207ENST00000472442 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
SCAMP4-207ENST00000472442 MYO3AQ8NEV4 1616 aa17.6■□□□□ 0.41
SCAMP4-207ENST00000472442 MYOM1P52179 1685 aa17.6■□□□□ 0.41
SCAMP4-207ENST00000472442 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
SCAMP4-207ENST00000472442 LRPPRCP42704 1394 aaKnown RBP17.59■□□□□ 0.41
SCAMP4-207ENST00000472442 NLRP13Q86W25 1043 aa17.58■□□□□ 0.4
SCAMP4-207ENST00000472442 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.4
SCAMP4-207ENST00000472442 IL27Q8NEV9 243 aa17.58■□□□□ 0.4
SCAMP4-207ENST00000472442 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.4
SCAMP4-207ENST00000472442 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.4
SCAMP4-207ENST00000472442 VGFO15240 615 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-207ENST00000472442 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
SCAMP4-207ENST00000472442 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
SCAMP4-207ENST00000472442 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-207ENST00000472442 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
SCAMP4-207ENST00000472442 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
SCAMP4-207ENST00000472442 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-207ENST00000472442 CENPJQ9HC77 1338 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-207ENST00000472442 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-207ENST00000472442 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-207ENST00000472442 ZFYVE9O95405 1425 aa17.54■□□□□ 0.4
SCAMP4-207ENST00000472442 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
SCAMP4-207ENST00000472442 MLECQ14165 292 aa17.54■□□□□ 0.4
SCAMP4-207ENST00000472442 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
SCAMP4-207ENST00000472442 RTN4Q9NQC3 1192 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-207ENST00000472442 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-207ENST00000472442 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
SCAMP4-207ENST00000472442 ASXL1Q8IXJ9 1541 aa17.5■□□□□ 0.39
SCAMP4-207ENST00000472442 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
SCAMP4-207ENST00000472442 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
SCAMP4-207ENST00000472442 NEFMP07197 916 aa17.48■□□□□ 0.39
SCAMP4-207ENST00000472442 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms