RNA–Protein interactions for RNA: ENST00000472429.1

GRIK1-208, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 1 (best)

Gene GRIK1, Length 1,775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-208ENST00000472429 POLR3GLQ9BT43 218 aa22.26■■□□□ 1.15
GRIK1-208ENST00000472429 BRD4O60885 1362 aaPredicted RBP22.26■■□□□ 1.15
GRIK1-208ENST00000472429 LRPPRCP42704 1394 aaKnown RBP22.26■■□□□ 1.15
GRIK1-208ENST00000472429 RNF123Q5XPI4 1314 aa22.26■■□□□ 1.15
GRIK1-208ENST00000472429 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
GRIK1-208ENST00000472429 NUDCQ9Y266 331 aa22.25■■□□□ 1.15
GRIK1-208ENST00000472429 KDM2AQ9Y2K7 1162 aa22.25■■□□□ 1.15
GRIK1-208ENST00000472429 ABCC3O15438 1527 aa22.24■■□□□ 1.15
GRIK1-208ENST00000472429 RALBP1Q15311 655 aa22.24■■□□□ 1.15
GRIK1-208ENST00000472429 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
GRIK1-208ENST00000472429 FANCIQ9NVI1 1328 aa22.22■■□□□ 1.15
GRIK1-208ENST00000472429 CEP152O94986 1710 aa22.21■■□□□ 1.15
GRIK1-208ENST00000472429 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
GRIK1-208ENST00000472429 TMC1Q8TDI8 760 aa22.19■■□□□ 1.14
GRIK1-208ENST00000472429 ZC3H13Q5T200 1668 aaKnown RBP22.18■■□□□ 1.14
GRIK1-208ENST00000472429 MROH2AA6NES4 1674 aa22.18■■□□□ 1.14
GRIK1-208ENST00000472429 C3P01024 1663 aa22.17■■□□□ 1.14
GRIK1-208ENST00000472429 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
GRIK1-208ENST00000472429 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
GRIK1-208ENST00000472429 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
GRIK1-208ENST00000472429 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
GRIK1-208ENST00000472429 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
GRIK1-208ENST00000472429 NPATQ14207 1427 aa22.12■■□□□ 1.13
GRIK1-208ENST00000472429 INSRP06213 1382 aa22.11■■□□□ 1.13
GRIK1-208ENST00000472429 B4GALNT3Q6L9W6 998 aa22.11■■□□□ 1.13
GRIK1-208ENST00000472429 EFCAB6Q5THR3 1501 aa22.11■■□□□ 1.13
GRIK1-208ENST00000472429 ARHGAP31Q2M1Z3 1444 aa22.1■■□□□ 1.13
GRIK1-208ENST00000472429 TET3O43151 1660 aa22.1■■□□□ 1.13
GRIK1-208ENST00000472429 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
GRIK1-208ENST00000472429 NBPF1Q3BBV0 1214 aa22.09■■□□□ 1.13
GRIK1-208ENST00000472429 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
GRIK1-208ENST00000472429 TESK2Q96S53 571 aa22.08■■□□□ 1.13
GRIK1-208ENST00000472429 PER1O15534 1290 aaPredicted RBP22.07■■□□□ 1.12
GRIK1-208ENST00000472429 CFAP65Q6ZU64 1925 aaKnown RBP22.06■■□□□ 1.12
GRIK1-208ENST00000472429 MSH5O43196 834 aa22.06■■□□□ 1.12
GRIK1-208ENST00000472429 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
GRIK1-208ENST00000472429 ERVK-7P63135 1459 aa22.05■■□□□ 1.12
GRIK1-208ENST00000472429 TNRQ92752 1358 aa22.05■■□□□ 1.12
GRIK1-208ENST00000472429 DISP3Q9P2K9 1392 aa22.05■■□□□ 1.12
GRIK1-208ENST00000472429 TRPM2O94759 1503 aa22.05■■□□□ 1.12
GRIK1-208ENST00000472429 SPATA31D1Q6ZQQ2 1576 aa22.02■■□□□ 1.12
GRIK1-208ENST00000472429 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
GRIK1-208ENST00000472429 PREX1Q8TCU6 1659 aa22.02■■□□□ 1.12
GRIK1-208ENST00000472429 PTPRTO14522 1441 aa22.01■■□□□ 1.11
GRIK1-208ENST00000472429 PDE3BQ13370 1112 aa22■■□□□ 1.11
GRIK1-208ENST00000472429 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
GRIK1-208ENST00000472429 NOS1P29475 1434 aa21.99■■□□□ 1.11
GRIK1-208ENST00000472429 TMF1P82094 1093 aa21.99■■□□□ 1.11
GRIK1-208ENST00000472429 BLMP54132 1417 aaPredicted RBP21.99■■□□□ 1.11
GRIK1-208ENST00000472429 STAC3Q96MF2 364 aa21.98■■□□□ 1.11
GRIK1-208ENST00000472429 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
GRIK1-208ENST00000472429 NEURL4Q96JN8 1562 aa21.97■■□□□ 1.11
GRIK1-208ENST00000472429 SYNMO15061 1565 aa21.96■■□□□ 1.11
GRIK1-208ENST00000472429 MYO3AQ8NEV4 1616 aa21.95■■□□□ 1.1
GRIK1-208ENST00000472429 IDI1Q13907 227 aa21.94■■□□□ 1.1
GRIK1-208ENST00000472429 CCDC136Q96JN2 1154 aa21.94■■□□□ 1.1
GRIK1-208ENST00000472429 LMTK3Q96Q04 1460 aa21.94■■□□□ 1.1
GRIK1-208ENST00000472429 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
GRIK1-208ENST00000472429 NLRP1Q9C000 1473 aa21.92■■□□□ 1.1
GRIK1-208ENST00000472429 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
GRIK1-208ENST00000472429 PANK3Q9H999 370 aa21.92■■□□□ 1.1
GRIK1-208ENST00000472429 UGGT1Q9NYU2 1555 aa21.92■■□□□ 1.1
GRIK1-208ENST00000472429 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
GRIK1-208ENST00000472429 HSPA2P54652 639 aa21.92■■□□□ 1.1
GRIK1-208ENST00000472429 SLC52A1Q9NWF4 448 aa21.92■■□□□ 1.1
GRIK1-208ENST00000472429 SCAF11Q99590 1463 aaKnown RBP21.91■■□□□ 1.1
GRIK1-208ENST00000472429 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
GRIK1-208ENST00000472429 CEP170BQ9Y4F5 1589 aaPredicted RBP21.9■■□□□ 1.1
GRIK1-208ENST00000472429 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
GRIK1-208ENST00000472429 RCAN3Q9UKA8 241 aa21.88■■□□□ 1.09
GRIK1-208ENST00000472429 CHGAP10645 457 aaKnown RBP21.87■■□□□ 1.09
GRIK1-208ENST00000472429 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
GRIK1-208ENST00000472429 PIK3C2BO00750 1634 aa21.86■■□□□ 1.09
GRIK1-208ENST00000472429 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
GRIK1-208ENST00000472429 SENP3-EIF4A1A0A087X0R7 540 aa21.84■■□□□ 1.09
GRIK1-208ENST00000472429 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
GRIK1-208ENST00000472429 ERICH6Q7L0X2 663 aa21.84■■□□□ 1.09
GRIK1-208ENST00000472429 THEMISQ8N1K5 641 aaPredicted RBP21.83■■□□□ 1.09
GRIK1-208ENST00000472429 MYOM2P54296 1465 aa21.83■■□□□ 1.08
GRIK1-208ENST00000472429 MYOM1P52179 1685 aa21.82■■□□□ 1.08
GRIK1-208ENST00000472429 NPC1L1Q9UHC9 1359 aa21.81■■□□□ 1.08
GRIK1-208ENST00000472429 UBR1Q8IWV7 1749 aa21.81■■□□□ 1.08
GRIK1-208ENST00000472429 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
GRIK1-208ENST00000472429 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
GRIK1-208ENST00000472429 ADGRB3O60242 1522 aa21.79■■□□□ 1.08
GRIK1-208ENST00000472429 PIK3C2GO75747 1445 aa21.77■■□□□ 1.08
GRIK1-208ENST00000472429 EXOC6Q8TAG9 804 aa21.77■■□□□ 1.08
GRIK1-208ENST00000472429 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
GRIK1-208ENST00000472429 IFT172Q9UG01 1749 aa21.77■■□□□ 1.08
GRIK1-208ENST00000472429 KDM5AP29375 1690 aaKnown RBP21.77■■□□□ 1.08
GRIK1-208ENST00000472429 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
GRIK1-208ENST00000472429 KNSTRNQ9Y448 316 aa21.76■■□□□ 1.07
GRIK1-208ENST00000472429 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
GRIK1-208ENST00000472429 CDCA7LQ96GN5 454 aa21.75■■□□□ 1.07
GRIK1-208ENST00000472429 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
GRIK1-208ENST00000472429 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
GRIK1-208ENST00000472429 SLC24A1O60721 1099 aa21.74■■□□□ 1.07
GRIK1-208ENST00000472429 SALL2Q9Y467 1007 aaPredicted RBP21.74■■□□□ 1.07
GRIK1-208ENST00000472429 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
GRIK1-208ENST00000472429 NRXN1Q9ULB1 1477 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms