RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, human

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM9-208	ENST00000472411	IQGAP1	P46940	1657 aa		13.89	□□□□□ -0.19
TMEM9-208	ENST00000472411	MADD	Q8WXG6	1647 aa		13.88	□□□□□ -0.19
TMEM9-208	ENST00000472411	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.88	□□□□□ -0.19
TMEM9-208	ENST00000472411	CCDC146	Q8IYE0	955 aa		13.88	□□□□□ -0.19
TMEM9-208	ENST00000472411	TRMT2A	Q8IZ69	625 aa	Known RBP	13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	IL27	Q8NEV9	243 aa		13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	FAM161A	Q3B820	660 aa		13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	C8orf34	Q49A92	452 aa		13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	EFCAB2	Q5VUJ9	269 aa		13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	ASXL1	Q8IXJ9	1541 aa		13.87	□□□□□ -0.19
TMEM9-208	ENST00000472411	SCAF11	Q99590	1463 aa	Known RBP	13.86	□□□□□ -0.19
TMEM9-208	ENST00000472411	PLCH2	O75038	1416 aa		13.86	□□□□□ -0.19
TMEM9-208	ENST00000472411	PIK3C2G	O75747	1445 aa		13.86	□□□□□ -0.19
TMEM9-208	ENST00000472411	APAF1	O14727	1248 aa		13.85	□□□□□ -0.19
TMEM9-208	ENST00000472411	SYNM	O15061	1565 aa		13.85	□□□□□ -0.19
TMEM9-208	ENST00000472411	TRAPPC8	Q9Y2L5	1435 aa		13.85	□□□□□ -0.19
TMEM9-208	ENST00000472411	RGS3	P49796	1198 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	NFKBIB	Q15653	356 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	CLASP1	Q7Z460	1538 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	ABCC2	Q92887	1545 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	STAC3	Q96MF2	364 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	SCAPER	Q9BY12	1400 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	SPHKAP	Q2M3C7	1700 aa		13.84	□□□□□ -0.19
TMEM9-208	ENST00000472411	NPC1L1	Q9UHC9	1359 aa		13.83	□□□□□ -0.19
TMEM9-208	ENST00000472411	CHD1	O14646	1710 aa		13.83	□□□□□ -0.2
TMEM9-208	ENST00000472411	BCAR3	O75815	825 aa		13.83	□□□□□ -0.2
TMEM9-208	ENST00000472411	ERCC6L2	Q5T890	1561 aa		13.83	□□□□□ -0.2
TMEM9-208	ENST00000472411	DAXX	Q9UER7	740 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM9-208	ENST00000472411	MYOM1	P52179	1685 aa		13.82	□□□□□ -0.2
TMEM9-208	ENST00000472411	AFAP1	Q8N556	730 aa		13.82	□□□□□ -0.2
TMEM9-208	ENST00000472411	CEP152	O94986	1710 aa		13.82	□□□□□ -0.2
TMEM9-208	ENST00000472411	TRPM2	O94759	1503 aa		13.82	□□□□□ -0.2
TMEM9-208	ENST00000472411	SHROOM2	Q13796	1616 aa		13.81	□□□□□ -0.2
TMEM9-208	ENST00000472411	SPAG9	O60271	1321 aa	Known RBP	13.81	□□□□□ -0.2
TMEM9-208	ENST00000472411	PTPRT	O14522	1441 aa		13.81	□□□□□ -0.2
TMEM9-208	ENST00000472411	NKTR	P30414	1462 aa	Known RBP	13.81	□□□□□ -0.2
TMEM9-208	ENST00000472411	DMRT2	Q9Y5R5	561 aa		13.81	□□□□□ -0.2
TMEM9-208	ENST00000472411	CLTCL1	P53675	1640 aa		13.8	□□□□□ -0.2
TMEM9-208	ENST00000472411	ABCC1	P33527	1531 aa		13.8	□□□□□ -0.2
TMEM9-208	ENST00000472411	GSE1	Q14687	1217 aa		13.8	□□□□□ -0.2
TMEM9-208	ENST00000472411		E9PSI1	815 aa		13.79	□□□□□ -0.2
TMEM9-208	ENST00000472411	CARD14	Q9BXL6	1004 aa		13.79	□□□□□ -0.2
TMEM9-208	ENST00000472411	RTN4	Q9NQC3	1192 aa	Known RBP	13.79	□□□□□ -0.2
TMEM9-208	ENST00000472411	CFAP70	Q5T0N1	1121 aa		13.79	□□□□□ -0.2
TMEM9-208	ENST00000472411	EIF3A	Q14152	1382 aa	Known RBP	13.78	□□□□□ -0.2
TMEM9-208	ENST00000472411	IGHD	P01880	384 aa		13.78	□□□□□ -0.2
TMEM9-208	ENST00000472411	KDM5A	P29375	1690 aa	Known RBP	13.78	□□□□□ -0.2
TMEM9-208	ENST00000472411	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.76	□□□□□ -0.21
TMEM9-208	ENST00000472411	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.76	□□□□□ -0.21
TMEM9-208	ENST00000472411	KIAA1210	Q9ULL0	1709 aa		13.75	□□□□□ -0.21
TMEM9-208	ENST00000472411	ERVK-7	P63135	1459 aa		13.75	□□□□□ -0.21
TMEM9-208	ENST00000472411	FRAT1	Q92837	279 aa	Predicted RBP	13.75	□□□□□ -0.21
TMEM9-208	ENST00000472411	ADGRF5	Q8IZF2	1346 aa		13.75	□□□□□ -0.21
TMEM9-208	ENST00000472411	SLC24A1	O60721	1099 aa		13.74	□□□□□ -0.21
TMEM9-208	ENST00000472411	PDE3A	Q14432	1141 aa		13.74	□□□□□ -0.21
TMEM9-208	ENST00000472411	TET3	O43151	1660 aa		13.74	□□□□□ -0.21
TMEM9-208	ENST00000472411	WWC1	Q8IX03	1113 aa		13.74	□□□□□ -0.21
TMEM9-208	ENST00000472411	NGEF	Q8N5V2	710 aa		13.74	□□□□□ -0.21
TMEM9-208	ENST00000472411	KIF3B	O15066	747 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	ZFYVE16	Q7Z3T8	1539 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	DEPDC5	O75140	1603 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	FRAT2	O75474	233 aa	Predicted RBP	13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	PANK1	Q8TE04	598 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	CGNL1	Q0VF96	1302 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	KANK1	Q14678	1352 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	BRPF3	Q9ULD4	1205 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	COG6	Q9Y2V7	657 aa		13.73	□□□□□ -0.21
TMEM9-208	ENST00000472411	USP19	O94966	1318 aa		13.72	□□□□□ -0.21
TMEM9-208	ENST00000472411	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.72	□□□□□ -0.21
TMEM9-208	ENST00000472411	CLUAP1	Q96AJ1	413 aa		13.72	□□□□□ -0.21
TMEM9-208	ENST00000472411	SEC24B	O95487	1268 aa		13.71	□□□□□ -0.22
TMEM9-208	ENST00000472411	POLR3A	O14802	1390 aa	Predicted RBP	13.71	□□□□□ -0.22
TMEM9-208	ENST00000472411	MAP3K4	Q9Y6R4	1608 aa		13.71	□□□□□ -0.22
TMEM9-208	ENST00000472411	VIRMA	Q69YN4	1812 aa	Known RBP	13.7	□□□□□ -0.22
TMEM9-208	ENST00000472411	NEUROD2	Q15784	382 aa		13.7	□□□□□ -0.22
TMEM9-208	ENST00000472411	UGGT1	Q9NYU2	1555 aa		13.7	□□□□□ -0.22
TMEM9-208	ENST00000472411	CANX	P27824	592 aa	Known RBP	13.7	□□□□□ -0.22
TMEM9-208	ENST00000472411	ABCA6	Q8N139	1617 aa		13.7	□□□□□ -0.22
TMEM9-208	ENST00000472411	VWDE	Q8N2E2	1590 aa		13.69	□□□□□ -0.22
TMEM9-208	ENST00000472411	RRP7A	Q9Y3A4	280 aa	Known RBP	13.69	□□□□□ -0.22
TMEM9-208	ENST00000472411	UHRF1BP1L	A0JNW5	1464 aa		13.69	□□□□□ -0.22
TMEM9-208	ENST00000472411	TNNT2	P45379	298 aa	Predicted RBP	13.68	□□□□□ -0.22
TMEM9-208	ENST00000472411	KIF1B	O60333	1816 aa		13.68	□□□□□ -0.22
TMEM9-208	ENST00000472411	NEURL4	Q96JN8	1562 aa		13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	MYOM2	P54296	1465 aa		13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	MAPK8IP3	Q9UPT6	1336 aa		13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	MORC1	Q86VD1	984 aa		13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	NINL	Q9Y2I6	1382 aa		13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	RARS	P54136	660 aa	Known RBP	13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	ATP7A	Q04656	1500 aa		13.67	□□□□□ -0.22
TMEM9-208	ENST00000472411	TCP11L2	Q8N4U5	519 aa		13.66	□□□□□ -0.22
TMEM9-208	ENST00000472411	SLC12A5	Q9H2X9	1139 aa		13.66	□□□□□ -0.22
TMEM9-208	ENST00000472411	ARAP3	Q8WWN8	1544 aa		13.66	□□□□□ -0.22
TMEM9-208	ENST00000472411	RUNDC1	Q96C34	613 aa		13.66	□□□□□ -0.22
TMEM9-208	ENST00000472411	TNN	Q9UQP3	1299 aa		13.65	□□□□□ -0.22
TMEM9-208	ENST00000472411	PCDHB15	Q9Y5E8	787 aa		13.65	□□□□□ -0.22
TMEM9-208	ENST00000472411	SBNO2	Q9Y2G9	1366 aa		13.65	□□□□□ -0.22
TMEM9-208	ENST00000472411	RLBP1	P12271	317 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms