RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 LMTK2Q8IWU2 1503 aa15.67■□□□□ 0.1
SCAMP3-205ENST00000472397 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
SCAMP3-205ENST00000472397 ROBO1Q9Y6N7 1651 aa15.67■□□□□ 0.1
SCAMP3-205ENST00000472397 C14orf37Q86TY3 774 aa15.66■□□□□ 0.1
SCAMP3-205ENST00000472397 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
SCAMP3-205ENST00000472397 MYO5BQ9ULV0 1848 aa15.64■□□□□ 0.09
SCAMP3-205ENST00000472397 SLAIN2Q9P270 581 aa15.64■□□□□ 0.09
SCAMP3-205ENST00000472397 ANKRD50Q9ULJ7 1429 aa15.64■□□□□ 0.09
SCAMP3-205ENST00000472397 MSH6P52701 1360 aa15.63■□□□□ 0.09
SCAMP3-205ENST00000472397 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
SCAMP3-205ENST00000472397 GCC2Q8IWJ2 1684 aa15.61■□□□□ 0.09
SCAMP3-205ENST00000472397 ADGRL2O95490 1459 aa15.6■□□□□ 0.09
SCAMP3-205ENST00000472397 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
SCAMP3-205ENST00000472397 PLEKHG1Q9ULL1 1385 aa15.59■□□□□ 0.09
SCAMP3-205ENST00000472397 SETD1AO15047 1707 aaKnown RBP15.58■□□□□ 0.08
SCAMP3-205ENST00000472397 PHLPP1O60346 1717 aa15.58■□□□□ 0.08
SCAMP3-205ENST00000472397 NWD1Q149M9 1564 aa15.58■□□□□ 0.08
SCAMP3-205ENST00000472397 NUTM2BA6NNL0 878 aaPredicted RBP15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 NUTM2EB1AL46 878 aaPredicted RBP15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 MEX3CQ5U5Q3 659 aaKnown RBP15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 NUTM2AQ8IVF1 878 aaPredicted RBP15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 TRIM52Q96A61 297 aa15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 NKTRP30414 1462 aaKnown RBP15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 KDM5AP29375 1690 aaKnown RBP15.57■□□□□ 0.08
SCAMP3-205ENST00000472397 TMEM131LA2VDJ0 1609 aa15.56■□□□□ 0.08
SCAMP3-205ENST00000472397 HDGFP51858 240 aaKnown RBP15.55■□□□□ 0.08
SCAMP3-205ENST00000472397 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 NUP155O75694 1391 aa15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 JCADQ9P266 1359 aa15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 AMOTL2Q9Y2J4 779 aa15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 TBX22Q9Y458 520 aa15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 CHD2O14647 1828 aaKnown RBP15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 E9PCH4 1651 aa15.54■□□□□ 0.08
SCAMP3-205ENST00000472397 ATF3P18847 181 aa15.53■□□□□ 0.08
SCAMP3-205ENST00000472397 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCAMP3-205ENST00000472397 RPRD2Q5VT52 1461 aaKnown RBP15.52■□□□□ 0.08
SCAMP3-205ENST00000472397 PTPRUQ92729 1446 aa15.52■□□□□ 0.08
SCAMP3-205ENST00000472397 ZNF326Q5BKZ1 582 aaKnown RBP15.52■□□□□ 0.08
SCAMP3-205ENST00000472397 DDX17Q92841 729 aaKnown RBP15.52■□□□□ 0.08
SCAMP3-205ENST00000472397 LRP6O75581 1613 aa15.52■□□□□ 0.08
SCAMP3-205ENST00000472397 UNC13BO14795 1591 aa15.5■□□□□ 0.07
SCAMP3-205ENST00000472397 COL16A1Q07092 1604 aaPredicted RBP15.5■□□□□ 0.07
SCAMP3-205ENST00000472397 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.48■□□□□ 0.07
SCAMP3-205ENST00000472397 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
SCAMP3-205ENST00000472397 CADPS2Q86UW7 1296 aa15.48■□□□□ 0.07
SCAMP3-205ENST00000472397 C19orf44Q9H6X5 657 aa15.48■□□□□ 0.07
SCAMP3-205ENST00000472397 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
SCAMP3-205ENST00000472397 METP08581 1390 aa15.44■□□□□ 0.06
SCAMP3-205ENST00000472397 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
SCAMP3-205ENST00000472397 TRPM2O94759 1503 aa15.43■□□□□ 0.06
SCAMP3-205ENST00000472397 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
SCAMP3-205ENST00000472397 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.062e-8■■■■■ 30.6
SCAMP3-205ENST00000472397 ZNF772Q68DY9 489 aaPredicted RBP15.41■□□□□ 0.06
SCAMP3-205ENST00000472397 AFF2P51816 1311 aa15.41■□□□□ 0.06
SCAMP3-205ENST00000472397 RXRBP28702 533 aa15.4■□□□□ 0.06
SCAMP3-205ENST00000472397 C8orf37Q96NL8 207 aa15.4■□□□□ 0.06
SCAMP3-205ENST00000472397 AHDC1Q5TGY3 1603 aaPredicted RBP15.39■□□□□ 0.05
SCAMP3-205ENST00000472397 PIK3R4Q99570 1358 aa15.39■□□□□ 0.05
SCAMP3-205ENST00000472397 ADAMTS2O95450 1211 aa15.39■□□□□ 0.05
SCAMP3-205ENST00000472397 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
SCAMP3-205ENST00000472397 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
SCAMP3-205ENST00000472397 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
SCAMP3-205ENST00000472397 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
SCAMP3-205ENST00000472397 MST1RQ04912 1400 aa15.38■□□□□ 0.05
SCAMP3-205ENST00000472397 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
SCAMP3-205ENST00000472397 SPHKAPQ2M3C7 1700 aa15.36■□□□□ 0.05
SCAMP3-205ENST00000472397 ORAI2Q96SN7 254 aa15.35■□□□□ 0.05
SCAMP3-205ENST00000472397 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
SCAMP3-205ENST00000472397 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
SCAMP3-205ENST00000472397 FOXD1Q16676 465 aa15.34■□□□□ 0.05
SCAMP3-205ENST00000472397 SETBP1Q9Y6X0 1596 aa15.33■□□□□ 0.05
SCAMP3-205ENST00000472397 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
SCAMP3-205ENST00000472397 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
SCAMP3-205ENST00000472397 NUTM2FA1L443 756 aa15.32■□□□□ 0.04
SCAMP3-205ENST00000472397 NGLY1Q96IV0 654 aa15.32■□□□□ 0.04
SCAMP3-205ENST00000472397 PNPLA6Q8IY17 1366 aa15.32■□□□□ 0.04
SCAMP3-205ENST00000472397 NEXMIFQ5QGS0 1516 aa15.32■□□□□ 0.04
SCAMP3-205ENST00000472397 XPCQ01831 940 aaPredicted RBP15.31■□□□□ 0.04
SCAMP3-205ENST00000472397 NALCNQ8IZF0 1738 aa15.31■□□□□ 0.04
SCAMP3-205ENST00000472397 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
SCAMP3-205ENST00000472397 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
SCAMP3-205ENST00000472397 ADGRL3Q9HAR2 1447 aa15.3■□□□□ 0.04
SCAMP3-205ENST00000472397 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
SCAMP3-205ENST00000472397 NHSL1Q5SYE7 1610 aa15.29■□□□□ 0.04
SCAMP3-205ENST00000472397 STK26Q9P289 416 aa15.29■□□□□ 0.04
SCAMP3-205ENST00000472397 C1orf167Q5SNV9 1468 aa15.28■□□□□ 0.04
SCAMP3-205ENST00000472397 RGS12O14924 1447 aa15.28■□□□□ 0.04
SCAMP3-205ENST00000472397 DCCP43146 1447 aa15.28■□□□□ 0.04
SCAMP3-205ENST00000472397 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
SCAMP3-205ENST00000472397 NAIPQ13075 1403 aa15.26■□□□□ 0.03
SCAMP3-205ENST00000472397 RBM6P78332 1123 aaKnown RBP15.26■□□□□ 0.03
SCAMP3-205ENST00000472397 RGL3Q3MIN7 710 aa15.26■□□□□ 0.03
SCAMP3-205ENST00000472397 ESCO1Q5FWF5 840 aa15.25■□□□□ 0.03
SCAMP3-205ENST00000472397 USP21Q9UK80 565 aa15.25■□□□□ 0.03
SCAMP3-205ENST00000472397 KIF1BO60333 1816 aa15.24■□□□□ 0.03
SCAMP3-205ENST00000472397 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
SCAMP3-205ENST00000472397 WAPLQ7Z5K2 1190 aa15.24■□□□□ 0.03
SCAMP3-205ENST00000472397 ADGRF5Q8IZF2 1346 aa15.22■□□□□ 0.03
SCAMP3-205ENST00000472397 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
SCAMP3-205ENST00000472397 FOXO3O43524 673 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms