RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 IQGAP1P46940 1657 aa14.29□□□□□ -0.12
APLF-204ENST00000471727 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
APLF-204ENST00000471727 CNGB1Q14028 1251 aaPredicted RBP14.26□□□□□ -0.13
APLF-204ENST00000471727 NPC1L1Q9UHC9 1359 aa14.26□□□□□ -0.13
APLF-204ENST00000471727 RPGRIP1LQ68CZ1 1315 aa14.25□□□□□ -0.13
APLF-204ENST00000471727 KNSTRNQ9Y448 316 aa14.25□□□□□ -0.13
APLF-204ENST00000471727 HECW2Q9P2P5 1572 aa14.24□□□□□ -0.13
APLF-204ENST00000471727 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
APLF-204ENST00000471727 NRXN1Q9ULB1 1477 aa14.24□□□□□ -0.13
APLF-204ENST00000471727 SYNMO15061 1565 aa14.23□□□□□ -0.13
APLF-204ENST00000471727 KIF1BO60333 1816 aa14.22□□□□□ -0.13
APLF-204ENST00000471727 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
APLF-204ENST00000471727 IRX6P78412 446 aaPredicted RBP14.22□□□□□ -0.13
APLF-204ENST00000471727 PPRC1Q5VV67 1664 aaKnown RBP14.21□□□□□ -0.13
APLF-204ENST00000471727 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
APLF-204ENST00000471727 CC2D1BQ5T0F9 858 aaKnown RBP14.2□□□□□ -0.14
APLF-204ENST00000471727 FRMPD1Q5SYB0 1578 aa14.19□□□□□ -0.14
APLF-204ENST00000471727 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
APLF-204ENST00000471727 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
APLF-204ENST00000471727 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
APLF-204ENST00000471727 NPATQ14207 1427 aa14.18□□□□□ -0.14
APLF-204ENST00000471727 ADGRF5Q8IZF2 1346 aa14.18□□□□□ -0.14
APLF-204ENST00000471727 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
APLF-204ENST00000471727 RBM19Q9Y4C8 960 aaKnown RBP14.18□□□□□ -0.14
APLF-204ENST00000471727 ASXL1Q8IXJ9 1541 aa14.18□□□□□ -0.14
APLF-204ENST00000471727 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
APLF-204ENST00000471727 IFT172Q9UG01 1749 aa14.17□□□□□ -0.14
APLF-204ENST00000471727 GGT6Q6P531 493 aa14.17□□□□□ -0.14
APLF-204ENST00000471727 ABCA6Q8N139 1617 aa14.17□□□□□ -0.14
APLF-204ENST00000471727 ABCC3O15438 1527 aa14.16□□□□□ -0.14
APLF-204ENST00000471727 PIK3C2GO75747 1445 aa14.16□□□□□ -0.14
APLF-204ENST00000471727 NOS1P29475 1434 aa14.16□□□□□ -0.14
APLF-204ENST00000471727 PUS7Q96PZ0 661 aaKnown RBP14.15□□□□□ -0.14
APLF-204ENST00000471727 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
APLF-204ENST00000471727 GLI2P10070 1586 aa14.15□□□□□ -0.14
APLF-204ENST00000471727 KDM5AP29375 1690 aaKnown RBP14.15□□□□□ -0.14
APLF-204ENST00000471727 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
APLF-204ENST00000471727 PPP2R1AP30153 589 aa14.15□□□□□ -0.14
APLF-204ENST00000471727 UGGT1Q9NYU2 1555 aa14.15□□□□□ -0.15
APLF-204ENST00000471727 CENPJQ9HC77 1338 aaPredicted RBP14.13□□□□□ -0.15
APLF-204ENST00000471727 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
APLF-204ENST00000471727 MSH5O43196 834 aa14.13□□□□□ -0.15
APLF-204ENST00000471727 WDR43Q15061 677 aaKnown RBP eCLIP14.13□□□□□ -0.15
APLF-204ENST00000471727 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
APLF-204ENST00000471727 CHGAP10645 457 aaKnown RBP14.12□□□□□ -0.15
APLF-204ENST00000471727 NGEFQ8N5V2 710 aa14.12□□□□□ -0.15
APLF-204ENST00000471727 SLC52A1Q9NWF4 448 aa14.12□□□□□ -0.15
APLF-204ENST00000471727 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
APLF-204ENST00000471727 DIP2CQ9Y2E4 1556 aa14.11□□□□□ -0.15
APLF-204ENST00000471727 ZC3H13Q5T200 1668 aaKnown RBP14.11□□□□□ -0.15
APLF-204ENST00000471727 RRP1P56182 461 aaKnown RBP14.11□□□□□ -0.15
APLF-204ENST00000471727 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
APLF-204ENST00000471727 MROH2AA6NES4 1674 aa14.11□□□□□ -0.15
APLF-204ENST00000471727 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
APLF-204ENST00000471727 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
APLF-204ENST00000471727 CAMSAP1Q5T5Y3 1602 aa14.1□□□□□ -0.15
APLF-204ENST00000471727 ZFYVE9O95405 1425 aa14.1□□□□□ -0.15
APLF-204ENST00000471727 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
APLF-204ENST00000471727 MYOM1P52179 1685 aa14.09□□□□□ -0.15
APLF-204ENST00000471727 PPLO60437 1756 aa14.08□□□□□ -0.15
APLF-204ENST00000471727 POTEDQ86YR6 584 aa14.08□□□□□ -0.15
APLF-204ENST00000471727 ADAMTS8Q9UP79 889 aa14.08□□□□□ -0.15
APLF-204ENST00000471727 FANCIQ9NVI1 1328 aa14.08□□□□□ -0.16
APLF-204ENST00000471727 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
APLF-204ENST00000471727 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
APLF-204ENST00000471727 ADGRB1O14514 1584 aa14.06□□□□□ -0.16
APLF-204ENST00000471727 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
APLF-204ENST00000471727 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
APLF-204ENST00000471727 EVC2Q86UK5 1308 aa14.03□□□□□ -0.16
APLF-204ENST00000471727 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
APLF-204ENST00000471727 CARD14Q9BXL6 1004 aa14.02□□□□□ -0.16
APLF-204ENST00000471727 NEXMIFQ5QGS0 1516 aa14.02□□□□□ -0.17
APLF-204ENST00000471727 GOLGA2Q08379 1002 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 IDI1Q13907 227 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 CDCA7LQ96GN5 454 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 ZNF521Q96K83 1311 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 NINLQ9Y2I6 1382 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 NSD2O96028 1365 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 YEATS2Q9ULM3 1422 aa14.01□□□□□ -0.17
APLF-204ENST00000471727 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
APLF-204ENST00000471727 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
APLF-204ENST00000471727 AGLP35573 1532 aa13.99□□□□□ -0.17
APLF-204ENST00000471727 FAM69CQ0P6D2 419 aa13.99□□□□□ -0.17
APLF-204ENST00000471727 SIGLEC1Q9BZZ2 1709 aa13.99□□□□□ -0.17
APLF-204ENST00000471727 USP32Q8NFA0 1604 aa13.99□□□□□ -0.17
APLF-204ENST00000471727 CGNL1Q0VF96 1302 aa13.98□□□□□ -0.17
APLF-204ENST00000471727 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
APLF-204ENST00000471727 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
APLF-204ENST00000471727 MORC1Q86VD1 984 aa13.98□□□□□ -0.17
APLF-204ENST00000471727 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
APLF-204ENST00000471727 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
APLF-204ENST00000471727 DUSP27Q5VZP5 1158 aa13.97□□□□□ -0.17
APLF-204ENST00000471727 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
APLF-204ENST00000471727 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
APLF-204ENST00000471727 SLFN5Q08AF3 891 aa13.97□□□□□ -0.17
APLF-204ENST00000471727 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
APLF-204ENST00000471727 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
APLF-204ENST00000471727 ANKRD36BQ8N2N9 1353 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms