RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 DIXDC1Q155Q3 683 aa9.52□□□□□ -0.89
NF1-208ENST00000471572 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
NF1-208ENST00000471572 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
NF1-208ENST00000471572 SPTLC1O15269 473 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 NISCHQ9Y2I1 1504 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 OATP04181 439 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
NF1-208ENST00000471572 TUSC1Q2TAM9 212 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
NF1-208ENST00000471572 RSBN1LQ6PCB5 846 aaPredicted RBP9.51□□□□□ -0.89
NF1-208ENST00000471572 RTL5Q5HYW3 569 aaPredicted RBP9.5□□□□□ -0.89
NF1-208ENST00000471572 LILRB3O75022 631 aa9.49□□□□□ -0.89
NF1-208ENST00000471572 ATG7O95352 703 aa9.49□□□□□ -0.89
NF1-208ENST00000471572 TIE1P35590 1138 aa9.49□□□□□ -0.89
NF1-208ENST00000471572 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
NF1-208ENST00000471572 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
NF1-208ENST00000471572 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
NF1-208ENST00000471572 VAC14Q08AM6 782 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 MRRFQ96E11 262 aaKnown RBP9.48□□□□□ -0.89
NF1-208ENST00000471572 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 MOXD2PA6NHM9 499 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 PHF14O94880 888 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 DNAJC14Q6Y2X3 702 aaPredicted RBP9.48□□□□□ -0.89
NF1-208ENST00000471572 ALG2Q9H553 416 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 BMP2KQ9NSY1 1161 aaPredicted RBP9.48□□□□□ -0.89
NF1-208ENST00000471572 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
NF1-208ENST00000471572 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 NDUFB9Q9Y6M9 179 aa9.48□□□□□ -0.89
NF1-208ENST00000471572 CD44P16070 742 aaKnown RBP9.47□□□□□ -0.89
NF1-208ENST00000471572 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
NF1-208ENST00000471572 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
NF1-208ENST00000471572 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.89
NF1-208ENST00000471572 EPAS1Q99814 870 aa9.45□□□□□ -0.9
NF1-208ENST00000471572 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
NF1-208ENST00000471572 EIF5BO60841 1220 aaKnown RBP9.44□□□□□ -0.9
NF1-208ENST00000471572 NDUFV2P19404 249 aa9.44□□□□□ -0.9
NF1-208ENST00000471572 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
NF1-208ENST00000471572 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
NF1-208ENST00000471572 CHMP4AQ9BY43 222 aa9.44□□□□□ -0.9
NF1-208ENST00000471572 MAFBQ9Y5Q3 323 aaPredicted RBP9.43□□□□□ -0.9
NF1-208ENST00000471572 CD46P15529 392 aa9.43□□□□□ -0.9
NF1-208ENST00000471572 PHLDB3Q6NSJ2 640 aa9.43□□□□□ -0.9
NF1-208ENST00000471572 SLAIN1Q8ND83 568 aa9.43□□□□□ -0.9
NF1-208ENST00000471572 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
NF1-208ENST00000471572 PTCD2Q8WV60 388 aaKnown RBP9.43□□□□□ -0.9
NF1-208ENST00000471572 ZNF16P17020 682 aaPredicted RBP9.42□□□□□ -0.9
NF1-208ENST00000471572 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
NF1-208ENST00000471572 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
NF1-208ENST00000471572 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
NF1-208ENST00000471572 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
NF1-208ENST00000471572 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
NF1-208ENST00000471572 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
NF1-208ENST00000471572 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
NF1-208ENST00000471572 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
NF1-208ENST00000471572 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
NF1-208ENST00000471572 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
NF1-208ENST00000471572 GJA5P36382 358 aa9.37□□□□□ -0.91
NF1-208ENST00000471572 CTDSPL2Q05D32 466 aa9.37□□□□□ -0.91
NF1-208ENST00000471572 TMEM164Q5U3C3 297 aa9.37□□□□□ -0.91
NF1-208ENST00000471572 TCF3P15923 654 aa9.36□□□□□ -0.91
NF1-208ENST00000471572 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
NF1-208ENST00000471572 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
NF1-208ENST00000471572 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
NF1-208ENST00000471572 CCER1Q8TC90 406 aaPredicted RBP9.36□□□□□ -0.91
NF1-208ENST00000471572 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
NF1-208ENST00000471572 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
NF1-208ENST00000471572 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
NF1-208ENST00000471572 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
NF1-208ENST00000471572 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
NF1-208ENST00000471572 BCL2L13Q9BXK5 485 aa9.34□□□□□ -0.91
NF1-208ENST00000471572 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
NF1-208ENST00000471572 PRPF38BQ5VTL8 546 aaKnown RBP9.33□□□□□ -0.92
NF1-208ENST00000471572 LRRN4Q8WUT4 740 aa9.33□□□□□ -0.92
NF1-208ENST00000471572 SIRT1Q96EB6 747 aa9.33□□□□□ -0.92
NF1-208ENST00000471572 OCEL1Q9H607 264 aa9.33□□□□□ -0.92
NF1-208ENST00000471572 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
NF1-208ENST00000471572 ERCC3P19447 782 aa9.32□□□□□ -0.92
NF1-208ENST00000471572 GIPC2Q8TF65 315 aa9.32□□□□□ -0.92
NF1-208ENST00000471572 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
NF1-208ENST00000471572 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
NF1-208ENST00000471572 G3V3G9 751 aa9.31□□□□□ -0.92
NF1-208ENST00000471572 MYT1Q01538 1121 aa9.31□□□□□ -0.92
NF1-208ENST00000471572 ELOAQ14241 798 aaKnown RBP9.31□□□□□ -0.92
NF1-208ENST00000471572 C6orf132Q5T0Z8 1188 aa9.31□□□□□ -0.92
NF1-208ENST00000471572 POTEDQ86YR6 584 aa9.31□□□□□ -0.92
NF1-208ENST00000471572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
NF1-208ENST00000471572 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
NF1-208ENST00000471572 ATP9BO43861 1147 aa9.3□□□□□ -0.92
NF1-208ENST00000471572 ZBTB3Q9H5J0 574 aa9.3□□□□□ -0.92
NF1-208ENST00000471572 FAM198AQ9UFP1 575 aa9.3□□□□□ -0.92
NF1-208ENST00000471572 SMARCA5O60264 1052 aaPredicted RBP9.29□□□□□ -0.92
NF1-208ENST00000471572 SSFA2P28290 1259 aa9.29□□□□□ -0.92
NF1-208ENST00000471572 SOWAHDA6NJG2 315 aa9.29□□□□□ -0.92
NF1-208ENST00000471572 SLC34A2O95436 690 aa9.29□□□□□ -0.92
NF1-208ENST00000471572 SERPINB4P48594 390 aa9.29□□□□□ -0.92
NF1-208ENST00000471572 DRC1Q96MC2 740 aa9.29□□□□□ -0.92
NF1-208ENST00000471572 PCDHGC3Q9UN70 934 aa9.29□□□□□ -0.92
NF1-208ENST00000471572 SOX11P35716 441 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms