RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 C11orf95C9JLR9 678 aaPredicted RBP36.35■■■■□ 3.41
U2AF1-208ENST00000471250 NRXN1Q9ULB1 1477 aa36.35■■■■□ 3.41
U2AF1-208ENST00000471250 CCDC7Q96M83 1385 aa36.34■■■■□ 3.41
U2AF1-208ENST00000471250 ESF1Q9H501 851 aaKnown RBP36.33■■■■□ 3.41
U2AF1-208ENST00000471250 ADGRF5Q8IZF2 1346 aa36.3■■■■□ 3.4
U2AF1-208ENST00000471250 ZMYM3Q14202 1370 aa36.29■■■■□ 3.4
U2AF1-208ENST00000471250 TMEM131LA2VDJ0 1609 aa36.28■■■■□ 3.4
U2AF1-208ENST00000471250 ST20-MTHFSA0A0A6YYL1 179 aa36.27■■■■□ 3.4
U2AF1-208ENST00000471250 KIF7Q2M1P5 1343 aa36.26■■■■□ 3.39
U2AF1-208ENST00000471250 NEXMIFQ5QGS0 1516 aa36.24■■■■□ 3.39
U2AF1-208ENST00000471250 MYO5BQ9ULV0 1848 aa36.23■■■■□ 3.39
U2AF1-208ENST00000471250 IQGAP1P46940 1657 aa36.22■■■■□ 3.39
U2AF1-208ENST00000471250 PIK3C2GO75747 1445 aa36.19■■■■□ 3.38
U2AF1-208ENST00000471250 CFAP70Q5T0N1 1121 aa36.16■■■■□ 3.38
U2AF1-208ENST00000471250 SCAF11Q99590 1463 aaKnown RBP36.16■■■■□ 3.38
U2AF1-208ENST00000471250 ZFYVE9O95405 1425 aa36.15■■■■□ 3.38
U2AF1-208ENST00000471250 VGFO15240 615 aaPredicted RBP36.15■■■■□ 3.38
U2AF1-208ENST00000471250 SETBP1Q9Y6X0 1596 aa36.12■■■■□ 3.37
U2AF1-208ENST00000471250 C14orf93Q9H972 538 aaKnown RBP36.1■■■■□ 3.37
U2AF1-208ENST00000471250 FER1L4A9Z1Z3 1794 aa36.09■■■■□ 3.37
U2AF1-208ENST00000471250 A2ML1A8K2U0 1454 aa36.08■■■■□ 3.37
U2AF1-208ENST00000471250 TESK2Q96S53 571 aa36.07■■■■□ 3.37
U2AF1-208ENST00000471250 TNRQ92752 1358 aa36.07■■■■□ 3.36
U2AF1-208ENST00000471250 STAG3Q9UJ98 1225 aa36.07■■■■□ 3.36
U2AF1-208ENST00000471250 ANP32CO43423 234 aa36.04■■■■□ 3.36
U2AF1-208ENST00000471250 EIF3AQ14152 1382 aaKnown RBP36.03■■■■□ 3.36
U2AF1-208ENST00000471250 NUTM2DQ5VT03 806 aaPredicted RBP36.02■■■■□ 3.36
U2AF1-208ENST00000471250 ADGRB1O14514 1584 aa36.01■■■■□ 3.36
U2AF1-208ENST00000471250 C3P01024 1663 aa36.01■■■■□ 3.36
U2AF1-208ENST00000471250 KDM5AP29375 1690 aaKnown RBP35.99■■■■□ 3.35
U2AF1-208ENST00000471250 POLR3GLQ9BT43 218 aa35.97■■■■□ 3.35
U2AF1-208ENST00000471250 TMF1P82094 1093 aa35.95■■■■□ 3.35
U2AF1-208ENST00000471250 DISP3Q9P2K9 1392 aa35.93■■■■□ 3.34
U2AF1-208ENST00000471250 RIMS2Q9UQ26 1411 aa35.93■■■■□ 3.34
U2AF1-208ENST00000471250 MYO3AQ8NEV4 1616 aa35.93■■■■□ 3.34
U2AF1-208ENST00000471250 CEBPAP49715 358 aaPredicted RBP35.92■■■■□ 3.34
U2AF1-208ENST00000471250 NLRP1Q9C000 1473 aa35.91■■■■□ 3.34
U2AF1-208ENST00000471250 UBR1Q8IWV7 1749 aa35.9■■■■□ 3.34
U2AF1-208ENST00000471250 CCER2I3L3R5 266 aa35.87■■■■□ 3.33
U2AF1-208ENST00000471250 TMEM132EQ6IEE7 984 aa35.87■■■■□ 3.33
U2AF1-208ENST00000471250 SLC24A1O60721 1099 aa35.85■■■■□ 3.33
U2AF1-208ENST00000471250 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.84■■■■□ 3.33
U2AF1-208ENST00000471250 ASXL1Q8IXJ9 1541 aa35.83■■■■□ 3.33
U2AF1-208ENST00000471250 ALKQ9UM73 1620 aa35.83■■■■□ 3.33
U2AF1-208ENST00000471250 ADAMTSL3P82987 1691 aa35.82■■■■□ 3.32
U2AF1-208ENST00000471250 TRAK1Q9UPV9 953 aa35.81■■■■□ 3.32
U2AF1-208ENST00000471250 SBNO2Q9Y2G9 1366 aa35.81■■■■□ 3.32
U2AF1-208ENST00000471250 RIMS1Q86UR5 1692 aaKnown RBP35.8■■■■□ 3.32
U2AF1-208ENST00000471250 HDGFP51858 240 aaKnown RBP35.79■■■■□ 3.32
U2AF1-208ENST00000471250 CDCA8Q53HL2 280 aa35.79■■■■□ 3.32
U2AF1-208ENST00000471250 CENPJQ9HC77 1338 aaPredicted RBP35.79■■■■□ 3.32
U2AF1-208ENST00000471250 TMEM2Q9UHN6 1383 aa35.77■■■■□ 3.32
U2AF1-208ENST00000471250 ARHGEF28Q8N1W1 1705 aaKnown RBP35.77■■■■□ 3.32
U2AF1-208ENST00000471250 QRICH2Q9H0J4 1663 aa35.74■■■■□ 3.31
U2AF1-208ENST00000471250 PRKRIP1Q9H875 184 aaPredicted RBP35.74■■■■□ 3.31
U2AF1-208ENST00000471250 SETD1AO15047 1707 aaKnown RBP35.73■■■■□ 3.31
U2AF1-208ENST00000471250 PLPPR3Q6T4P5 718 aa35.72■■■■□ 3.31
U2AF1-208ENST00000471250 NRXN3Q9Y4C0 1643 aa35.72■■■■□ 3.31
U2AF1-208ENST00000471250 YTHDC1Q96MU7 727 aaKnown RBP35.7■■■■□ 3.31
U2AF1-208ENST00000471250 SENP3Q9H4L4 574 aaPredicted RBP35.7■■■■□ 3.31
U2AF1-208ENST00000471250 PTPRMP28827 1452 aa35.7■■■■□ 3.3
U2AF1-208ENST00000471250 YTHDC2Q9H6S0 1430 aaKnown RBP35.69■■■■□ 3.3
U2AF1-208ENST00000471250 SLIT1O75093 1534 aa35.65■■■■□ 3.3
U2AF1-208ENST00000471250 ARHGAP23Q9P227 1491 aa35.64■■■■□ 3.3
U2AF1-208ENST00000471250 STK26Q9P289 416 aa35.62■■■■□ 3.29
U2AF1-208ENST00000471250 MYOM1P52179 1685 aa35.62■■■■□ 3.29
U2AF1-208ENST00000471250 PER1O15534 1290 aaPredicted RBP35.6■■■■□ 3.29
U2AF1-208ENST00000471250 PANK3Q9H999 370 aa35.6■■■■□ 3.29
U2AF1-208ENST00000471250 LRPPRCP42704 1394 aaKnown RBP35.59■■■■□ 3.29
U2AF1-208ENST00000471250 THEMISQ8N1K5 641 aaPredicted RBP35.59■■■■□ 3.29
U2AF1-208ENST00000471250 DLC1Q96QB1 1528 aa35.58■■■■□ 3.29
U2AF1-208ENST00000471250 PLEKHG1Q9ULL1 1385 aa35.58■■■■□ 3.29
U2AF1-208ENST00000471250 CENPBP07199 599 aaPredicted RBP35.57■■■■□ 3.28
U2AF1-208ENST00000471250 LTKP29376 864 aa35.57■■■■□ 3.28
U2AF1-208ENST00000471250 CEP170BQ9Y4F5 1589 aaPredicted RBP35.56■■■■□ 3.28
U2AF1-208ENST00000471250 TXNDC2Q86VQ3 553 aa35.55■■■■□ 3.28
U2AF1-208ENST00000471250 EID1Q9Y6B2 187 aa35.55■■■■□ 3.28
U2AF1-208ENST00000471250 KTN1Q86UP2 1357 aaKnown RBP35.53■■■■□ 3.28
U2AF1-208ENST00000471250 PUS7Q96PZ0 661 aaKnown RBP35.52■■■■□ 3.28
U2AF1-208ENST00000471250 ABCC11Q96J66 1382 aa35.52■■■■□ 3.28
U2AF1-208ENST00000471250 METP08581 1390 aa35.52■■■■□ 3.28
U2AF1-208ENST00000471250 ADAMTS13Q76LX8 1427 aa35.51■■■■□ 3.28
U2AF1-208ENST00000471250 TULP4Q9NRJ4 1543 aa35.51■■■■□ 3.27
U2AF1-208ENST00000471250 EVC2Q86UK5 1308 aa35.5■■■■□ 3.27
U2AF1-208ENST00000471250 PRAM1Q96QH2 718 aa35.5■■■■□ 3.27
U2AF1-208ENST00000471250 ZNF142P52746 1687 aaPredicted RBP35.5■■■■□ 3.27
U2AF1-208ENST00000471250 BCANQ96GW7 911 aa35.49■■■■□ 3.27
U2AF1-208ENST00000471250 SETD1BQ9UPS6 1966 aaKnown RBP35.48■■■■□ 3.27
U2AF1-208ENST00000471250 POGKQ9P215 609 aa35.48■■■■□ 3.27
U2AF1-208ENST00000471250 KNDC1Q76NI1 1749 aa35.48■■■■□ 3.27
U2AF1-208ENST00000471250 RALBP1Q15311 655 aa35.47■■■■□ 3.27
U2AF1-208ENST00000471250 MED14O60244 1454 aa35.46■■■■□ 3.27
U2AF1-208ENST00000471250 SAFB2Q14151 953 aaKnown RBP eCLIP35.44■■■■□ 3.26
U2AF1-208ENST00000471250 CNGB1Q14028 1251 aaPredicted RBP35.43■■■■□ 3.26
U2AF1-208ENST00000471250 TECPR2O15040 1411 aa35.43■■■■□ 3.26
U2AF1-208ENST00000471250 CCDC184Q52MB2 194 aa35.43■■■■□ 3.26
U2AF1-208ENST00000471250 SIRT1Q96EB6 747 aa35.42■■■■□ 3.26
U2AF1-208ENST00000471250 PARD3Q8TEW0 1356 aa35.41■■■■□ 3.26
U2AF1-208ENST00000471250 KNSTRNQ9Y448 316 aa35.39■■■■□ 3.26
U2AF1-208ENST00000471250 CPS1P31327 1500 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms