RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 IDI1Q13907 227 aa13.26□□□□□ -0.29
PTPRE-207ENST00000471218 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
PTPRE-207ENST00000471218 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
PTPRE-207ENST00000471218 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
PTPRE-207ENST00000471218 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
PTPRE-207ENST00000471218 ALKQ9UM73 1620 aa13.25□□□□□ -0.29
PTPRE-207ENST00000471218 BCANQ96GW7 911 aa13.25□□□□□ -0.29
PTPRE-207ENST00000471218 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
PTPRE-207ENST00000471218 SENP3Q9H4L4 574 aaPredicted RBP13.24□□□□□ -0.29
PTPRE-207ENST00000471218 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
PTPRE-207ENST00000471218 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
PTPRE-207ENST00000471218 CEP152O94986 1710 aa13.23□□□□□ -0.29
PTPRE-207ENST00000471218 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
PTPRE-207ENST00000471218 STRCP1A6NGW2 1772 aa13.22□□□□□ -0.29
PTPRE-207ENST00000471218 MSH6P52701 1360 aa13.22□□□□□ -0.29
PTPRE-207ENST00000471218 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
PTPRE-207ENST00000471218 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRE-207ENST00000471218 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
PTPRE-207ENST00000471218 NUP155O75694 1391 aa13.21□□□□□ -0.29
PTPRE-207ENST00000471218 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
PTPRE-207ENST00000471218 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
PTPRE-207ENST00000471218 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.3
PTPRE-207ENST00000471218 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
PTPRE-207ENST00000471218 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
PTPRE-207ENST00000471218 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
PTPRE-207ENST00000471218 NCOA3Q9Y6Q9 1424 aa13.2□□□□□ -0.3
PTPRE-207ENST00000471218 RGS17Q9UGC6 210 aaPredicted RBP13.19□□□□□ -0.3
PTPRE-207ENST00000471218 NOS1P29475 1434 aa13.19□□□□□ -0.3
PTPRE-207ENST00000471218 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
PTPRE-207ENST00000471218 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
PTPRE-207ENST00000471218 TONSLQ96HA7 1378 aa13.17□□□□□ -0.3
PTPRE-207ENST00000471218 TET3O43151 1660 aa13.16□□□□□ -0.3
PTPRE-207ENST00000471218 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
PTPRE-207ENST00000471218 JCADQ9P266 1359 aa13.16□□□□□ -0.3
PTPRE-207ENST00000471218 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
PTPRE-207ENST00000471218 ADGRB3O60242 1522 aa13.14□□□□□ -0.31
PTPRE-207ENST00000471218 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
PTPRE-207ENST00000471218 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
PTPRE-207ENST00000471218 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
PTPRE-207ENST00000471218 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
PTPRE-207ENST00000471218 ATF3P18847 181 aa13.13□□□□□ -0.31
PTPRE-207ENST00000471218 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
PTPRE-207ENST00000471218 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
PTPRE-207ENST00000471218 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
PTPRE-207ENST00000471218 RIMS2Q9UQ26 1411 aa13.11□□□□□ -0.31
PTPRE-207ENST00000471218 ROBO1Q9Y6N7 1651 aa13.11□□□□□ -0.31
PTPRE-207ENST00000471218 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
PTPRE-207ENST00000471218 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
PTPRE-207ENST00000471218 MEX3CQ5U5Q3 659 aaKnown RBP13.1□□□□□ -0.31
PTPRE-207ENST00000471218 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
PTPRE-207ENST00000471218 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
PTPRE-207ENST00000471218 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
PTPRE-207ENST00000471218 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
PTPRE-207ENST00000471218 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
PTPRE-207ENST00000471218 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
PTPRE-207ENST00000471218 TRPM2O94759 1503 aa13.07□□□□□ -0.32
PTPRE-207ENST00000471218 CHD2O14647 1828 aaKnown RBP13.05□□□□□ -0.32
PTPRE-207ENST00000471218 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
PTPRE-207ENST00000471218 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
PTPRE-207ENST00000471218 ZNF316A6NFI3 1004 aaPredicted RBP13.04□□□□□ -0.32
PTPRE-207ENST00000471218 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
PTPRE-207ENST00000471218 RXRBP28702 533 aa13.03□□□□□ -0.32
PTPRE-207ENST00000471218 DCCP43146 1447 aa13.03□□□□□ -0.32
PTPRE-207ENST00000471218 TMEM131LA2VDJ0 1609 aa13.02□□□□□ -0.32
PTPRE-207ENST00000471218 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.33
PTPRE-207ENST00000471218 E9PCH4 1651 aa13□□□□□ -0.33
PTPRE-207ENST00000471218 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
PTPRE-207ENST00000471218 FOXD1Q16676 465 aa13□□□□□ -0.33
PTPRE-207ENST00000471218 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
PTPRE-207ENST00000471218 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
PTPRE-207ENST00000471218 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
PTPRE-207ENST00000471218 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
PTPRE-207ENST00000471218 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
PTPRE-207ENST00000471218 SPHKAPQ2M3C7 1700 aa12.98□□□□□ -0.33
PTPRE-207ENST00000471218 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
PTPRE-207ENST00000471218 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
PTPRE-207ENST00000471218 UPF1Q92900 1129 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPRE-207ENST00000471218 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
PTPRE-207ENST00000471218 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
PTPRE-207ENST00000471218 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
PTPRE-207ENST00000471218 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
PTPRE-207ENST00000471218 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
PTPRE-207ENST00000471218 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
PTPRE-207ENST00000471218 NGLY1Q96IV0 654 aa12.95□□□□□ -0.34
PTPRE-207ENST00000471218 SHPRHQ149N8 1683 aa12.95□□□□□ -0.34
PTPRE-207ENST00000471218 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
PTPRE-207ENST00000471218 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
PTPRE-207ENST00000471218 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
PTPRE-207ENST00000471218 AFF2P51816 1311 aa12.92□□□□□ -0.34
PTPRE-207ENST00000471218 GPRASP1Q5JY77 1395 aa12.92□□□□□ -0.34
PTPRE-207ENST00000471218 LRP6O75581 1613 aa12.91□□□□□ -0.34
PTPRE-207ENST00000471218 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
PTPRE-207ENST00000471218 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
PTPRE-207ENST00000471218 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
PTPRE-207ENST00000471218 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
PTPRE-207ENST00000471218 MYOM2P54296 1465 aa12.91□□□□□ -0.34
PTPRE-207ENST00000471218 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
PTPRE-207ENST00000471218 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
PTPRE-207ENST00000471218 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
PTPRE-207ENST00000471218 MST1RQ04912 1400 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms