RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 ADRA2BP18089 450 aa12.35□□□□□ -0.43
HDLBP-233ENST00000470710 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
HDLBP-233ENST00000470710 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
HDLBP-233ENST00000470710 RIMS1Q86UR5 1692 aaKnown RBP12.35□□□□□ -0.43
HDLBP-233ENST00000470710 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
HDLBP-233ENST00000470710 ROCK2O75116 1388 aaKnown RBP12.33□□□□□ -0.44
HDLBP-233ENST00000470710 KDM5AP29375 1690 aaKnown RBP12.33□□□□□ -0.44
HDLBP-233ENST00000470710 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-233ENST00000470710 PIK3C2GO75747 1445 aa12.33□□□□□ -0.44
HDLBP-233ENST00000470710 IFT172Q9UG01 1749 aa12.33□□□□□ -0.44
HDLBP-233ENST00000470710 PTPRMP28827 1452 aa12.33□□□□□ -0.44
HDLBP-233ENST00000470710 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
HDLBP-233ENST00000470710 PPLO60437 1756 aa12.31□□□□□ -0.44
HDLBP-233ENST00000470710 RIMS2Q9UQ26 1411 aa12.31□□□□□ -0.44
HDLBP-233ENST00000470710 TRPM1Q7Z4N2 1603 aa12.31□□□□□ -0.44
HDLBP-233ENST00000470710 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
HDLBP-233ENST00000470710 CARD11Q9BXL7 1154 aa12.31□□□□□ -0.44
HDLBP-233ENST00000470710 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
HDLBP-233ENST00000470710 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
HDLBP-233ENST00000470710 NBPF1Q3BBV0 1214 aa12.3□□□□□ -0.44
HDLBP-233ENST00000470710 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
HDLBP-233ENST00000470710 USP47Q96K76 1375 aa12.3□□□□□ -0.44
HDLBP-233ENST00000470710 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
HDLBP-233ENST00000470710 LAMC1P11047 1609 aa12.29□□□□□ -0.44
HDLBP-233ENST00000470710 KIAA1210Q9ULL0 1709 aa12.28□□□□□ -0.44
HDLBP-233ENST00000470710 CFAP70Q5T0N1 1121 aa12.28□□□□□ -0.44
HDLBP-233ENST00000470710 THEMISQ8N1K5 641 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-233ENST00000470710 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
HDLBP-233ENST00000470710 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
HDLBP-233ENST00000470710 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.44
HDLBP-233ENST00000470710 SLIT1O75093 1534 aa12.27□□□□□ -0.44
HDLBP-233ENST00000470710 MSH5O43196 834 aa12.27□□□□□ -0.45
HDLBP-233ENST00000470710 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-233ENST00000470710 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
HDLBP-233ENST00000470710 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-233ENST00000470710 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
HDLBP-233ENST00000470710 SETD1BQ9UPS6 1966 aaKnown RBP12.26□□□□□ -0.45
HDLBP-233ENST00000470710 SETBP1Q9Y6X0 1596 aa12.26□□□□□ -0.45
HDLBP-233ENST00000470710 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
HDLBP-233ENST00000470710 ADGRB1O14514 1584 aa12.24□□□□□ -0.45
HDLBP-233ENST00000470710 ZNF142P52746 1687 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-233ENST00000470710 PLEKHG1Q9ULL1 1385 aa12.24□□□□□ -0.45
HDLBP-233ENST00000470710 EID1Q9Y6B2 187 aa12.24□□□□□ -0.45
HDLBP-233ENST00000470710 EIF3AQ14152 1382 aaKnown RBP12.22□□□□□ -0.45
HDLBP-233ENST00000470710 LTKP29376 864 aa12.22□□□□□ -0.45
HDLBP-233ENST00000470710 TXNDC2Q86VQ3 553 aa12.22□□□□□ -0.45
HDLBP-233ENST00000470710 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-233ENST00000470710 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.45
HDLBP-233ENST00000470710 ALKQ9UM73 1620 aa12.21□□□□□ -0.46
HDLBP-233ENST00000470710 IQGAP1P46940 1657 aa12.19□□□□□ -0.46
HDLBP-233ENST00000470710 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
HDLBP-233ENST00000470710 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
HDLBP-233ENST00000470710 ADAMTS13Q76LX8 1427 aa12.19□□□□□ -0.46
HDLBP-233ENST00000470710 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
HDLBP-233ENST00000470710 ANKLE2Q86XL3 938 aa12.18□□□□□ -0.46
HDLBP-233ENST00000470710 TESK2Q96S53 571 aa12.18□□□□□ -0.46
HDLBP-233ENST00000470710 MED14O60244 1454 aa12.18□□□□□ -0.46
HDLBP-233ENST00000470710 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
HDLBP-233ENST00000470710 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
HDLBP-233ENST00000470710 SLC24A1O60721 1099 aa12.17□□□□□ -0.46
HDLBP-233ENST00000470710 CCDC7Q96M83 1385 aa12.17□□□□□ -0.46
HDLBP-233ENST00000470710 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
HDLBP-233ENST00000470710 WASHC2AQ641Q2 1341 aa12.16□□□□□ -0.46
HDLBP-233ENST00000470710 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-233ENST00000470710 TBX22Q9Y458 520 aa12.16□□□□□ -0.46
HDLBP-233ENST00000470710 METP08581 1390 aa12.16□□□□□ -0.46
HDLBP-233ENST00000470710 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
HDLBP-233ENST00000470710 KIF7Q2M1P5 1343 aa12.15□□□□□ -0.46
HDLBP-233ENST00000470710 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-233ENST00000470710 DIP2AQ14689 1571 aa12.15□□□□□ -0.46
HDLBP-233ENST00000470710 BCANQ96GW7 911 aa12.15□□□□□ -0.46
HDLBP-233ENST00000470710 TRAK1Q9UPV9 953 aa12.15□□□□□ -0.46
HDLBP-233ENST00000470710 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
HDLBP-233ENST00000470710 DIEXFQ68CQ4 756 aaKnown RBP12.14□□□□□ -0.47
HDLBP-233ENST00000470710 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
HDLBP-233ENST00000470710 DLC1Q96QB1 1528 aa12.14□□□□□ -0.47
HDLBP-233ENST00000470710 TECPR2O15040 1411 aa12.13□□□□□ -0.47
HDLBP-233ENST00000470710 TMF1P82094 1093 aa12.13□□□□□ -0.47
HDLBP-233ENST00000470710 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
HDLBP-233ENST00000470710 STK26Q9P289 416 aa12.12□□□□□ -0.47
HDLBP-233ENST00000470710 NPHP4O75161 1426 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-233ENST00000470710 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
HDLBP-233ENST00000470710 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
HDLBP-233ENST00000470710 DISP3Q9P2K9 1392 aa12.11□□□□□ -0.47
HDLBP-233ENST00000470710 CDCA8Q53HL2 280 aa12.11□□□□□ -0.47
HDLBP-233ENST00000470710 SLC26A8Q96RN1 970 aa12.11□□□□□ -0.47
HDLBP-233ENST00000470710 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
HDLBP-233ENST00000470710 ARHGEF28Q8N1W1 1705 aaKnown RBP12.09□□□□□ -0.47
HDLBP-233ENST00000470710 PRAM1Q96QH2 718 aa12.09□□□□□ -0.47
HDLBP-233ENST00000470710 CPS1P31327 1500 aa12.09□□□□□ -0.47
HDLBP-233ENST00000470710 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
HDLBP-233ENST00000470710 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
HDLBP-233ENST00000470710 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
HDLBP-233ENST00000470710 POGKQ9P215 609 aa12.08□□□□□ -0.48
HDLBP-233ENST00000470710 PTCH1Q13635 1447 aa12.08□□□□□ -0.48
HDLBP-233ENST00000470710 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
HDLBP-233ENST00000470710 POLR1AO95602 1720 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-233ENST00000470710 AMOTL2Q9Y2J4 779 aa12.07□□□□□ -0.48
HDLBP-233ENST00000470710 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
HDLBP-233ENST00000470710 HSPA2P54652 639 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms