RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 TMF1P82094 1093 aa19.05■□□□□ 0.64
CCNL1-212ENST00000470121 PIK3C2BO00750 1634 aa19.05■□□□□ 0.64
CCNL1-212ENST00000470121 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
CCNL1-212ENST00000470121 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
CCNL1-212ENST00000470121 PER1O15534 1290 aaPredicted RBP19.04■□□□□ 0.64
CCNL1-212ENST00000470121 SYNMO15061 1565 aa19.04■□□□□ 0.64
CCNL1-212ENST00000470121 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
CCNL1-212ENST00000470121 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
CCNL1-212ENST00000470121 RPGRIP1LQ68CZ1 1315 aa19.03■□□□□ 0.64
CCNL1-212ENST00000470121 PPLO60437 1756 aa19.02■□□□□ 0.63
CCNL1-212ENST00000470121 AGLP35573 1532 aa19.01■□□□□ 0.63
CCNL1-212ENST00000470121 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.63
CCNL1-212ENST00000470121 RALBP1Q15311 655 aa18.99■□□□□ 0.63
CCNL1-212ENST00000470121 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
CCNL1-212ENST00000470121 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
CCNL1-212ENST00000470121 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
CCNL1-212ENST00000470121 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
CCNL1-212ENST00000470121 EIF3AQ14152 1382 aaKnown RBP18.97■□□□□ 0.63
CCNL1-212ENST00000470121 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
CCNL1-212ENST00000470121 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
CCNL1-212ENST00000470121 PANK3Q9H999 370 aa18.96■□□□□ 0.63
CCNL1-212ENST00000470121 SLC52A1Q9NWF4 448 aa18.96■□□□□ 0.63
CCNL1-212ENST00000470121 PARD3Q8TEW0 1356 aa18.95■□□□□ 0.62
CCNL1-212ENST00000470121 IDI1Q13907 227 aa18.95■□□□□ 0.62
CCNL1-212ENST00000470121 PREX1Q8TCU6 1659 aa18.94■□□□□ 0.62
CCNL1-212ENST00000470121 MYBBP1AQ9BQG0 1328 aaKnown RBP18.94■□□□□ 0.62
CCNL1-212ENST00000470121 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
CCNL1-212ENST00000470121 SUPT16HQ9Y5B9 1047 aaKnown RBP18.94■□□□□ 0.62
CCNL1-212ENST00000470121 NEXMIFQ5QGS0 1516 aa18.93■□□□□ 0.62
CCNL1-212ENST00000470121 CDCA8Q53HL2 280 aa18.93■□□□□ 0.62
CCNL1-212ENST00000470121 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
CCNL1-212ENST00000470121 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CCNL1-212ENST00000470121 MYO3AQ8NEV4 1616 aa18.92■□□□□ 0.62
CCNL1-212ENST00000470121 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
CCNL1-212ENST00000470121 ADGRB1O14514 1584 aa18.92■□□□□ 0.62
CCNL1-212ENST00000470121 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
CCNL1-212ENST00000470121 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
CCNL1-212ENST00000470121 ARHGEF40Q8TER5 1519 aa18.89■□□□□ 0.61
CCNL1-212ENST00000470121 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
CCNL1-212ENST00000470121 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
CCNL1-212ENST00000470121 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.61
CCNL1-212ENST00000470121 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
CCNL1-212ENST00000470121 TMC1Q8TDI8 760 aa18.88■□□□□ 0.61
CCNL1-212ENST00000470121 FBXO31Q5XUX0 539 aaPredicted RBP18.88■□□□□ 0.61
CCNL1-212ENST00000470121 LRPPRCP42704 1394 aaKnown RBP18.87■□□□□ 0.61
CCNL1-212ENST00000470121 MYOM1P52179 1685 aa18.86■□□□□ 0.61
CCNL1-212ENST00000470121 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
CCNL1-212ENST00000470121 KDM5AP29375 1690 aaKnown RBP18.85■□□□□ 0.61
CCNL1-212ENST00000470121 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
CCNL1-212ENST00000470121 CENPJQ9HC77 1338 aaPredicted RBP18.84■□□□□ 0.61
CCNL1-212ENST00000470121 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
CCNL1-212ENST00000470121 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
CCNL1-212ENST00000470121 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
CCNL1-212ENST00000470121 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
CCNL1-212ENST00000470121 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
CCNL1-212ENST00000470121 SPATA31D1Q6ZQQ2 1576 aa18.82■□□□□ 0.6
CCNL1-212ENST00000470121 NUTM2DQ5VT03 806 aaPredicted RBP18.82■□□□□ 0.6
CCNL1-212ENST00000470121 NPC1L1Q9UHC9 1359 aa18.8■□□□□ 0.6
CCNL1-212ENST00000470121 KNSTRNQ9Y448 316 aa18.8■□□□□ 0.6
CCNL1-212ENST00000470121 FKBP8Q14318 412 aa18.79■□□□□ 0.6
CCNL1-212ENST00000470121 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
CCNL1-212ENST00000470121 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
CCNL1-212ENST00000470121 MLECQ14165 292 aa18.77■□□□□ 0.6
CCNL1-212ENST00000470121 ARHGEF28Q8N1W1 1705 aaKnown RBP18.76■□□□□ 0.59
CCNL1-212ENST00000470121 INSRP06213 1382 aa18.75■□□□□ 0.59
CCNL1-212ENST00000470121 PUS7Q96PZ0 661 aaKnown RBP18.75■□□□□ 0.59
CCNL1-212ENST00000470121 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
CCNL1-212ENST00000470121 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
CCNL1-212ENST00000470121 ZMYM3Q14202 1370 aa18.74■□□□□ 0.59
CCNL1-212ENST00000470121 NEFLP07196 543 aa18.73■□□□□ 0.59
CCNL1-212ENST00000470121 PPP2R1AP30153 589 aa18.72■□□□□ 0.59
CCNL1-212ENST00000470121 SMG6Q86US8 1419 aaKnown RBP18.72■□□□□ 0.59
CCNL1-212ENST00000470121 ALKQ9UM73 1620 aa18.7■□□□□ 0.58
CCNL1-212ENST00000470121 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
CCNL1-212ENST00000470121 TULP4Q9NRJ4 1543 aa18.68■□□□□ 0.58
CCNL1-212ENST00000470121 PTPRMP28827 1452 aa18.67■□□□□ 0.58
CCNL1-212ENST00000470121 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
CCNL1-212ENST00000470121 RIMS2Q9UQ26 1411 aa18.67■□□□□ 0.58
CCNL1-212ENST00000470121 EVC2Q86UK5 1308 aa18.67■□□□□ 0.58
CCNL1-212ENST00000470121 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
CCNL1-212ENST00000470121 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
CCNL1-212ENST00000470121 ESF1Q9H501 851 aaKnown RBP18.66■□□□□ 0.58
CCNL1-212ENST00000470121 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
CCNL1-212ENST00000470121 STK26Q9P289 416 aa18.64■□□□□ 0.57
CCNL1-212ENST00000470121 BCANQ96GW7 911 aa18.63■□□□□ 0.57
CCNL1-212ENST00000470121 SETD1AO15047 1707 aaKnown RBP18.62■□□□□ 0.57
CCNL1-212ENST00000470121 TNRQ92752 1358 aa18.61■□□□□ 0.57
CCNL1-212ENST00000470121 ERICH6BQ5W0A0 696 aa18.61■□□□□ 0.57
CCNL1-212ENST00000470121 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
CCNL1-212ENST00000470121 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
CCNL1-212ENST00000470121 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCNL1-212ENST00000470121 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
CCNL1-212ENST00000470121 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
CCNL1-212ENST00000470121 PRAM1Q96QH2 718 aa18.6■□□□□ 0.57
CCNL1-212ENST00000470121 ADAMTS8Q9UP79 889 aa18.6■□□□□ 0.57
CCNL1-212ENST00000470121 DLC1Q96QB1 1528 aa18.6■□□□□ 0.57
CCNL1-212ENST00000470121 CABP2Q9NPB3 220 aa18.59■□□□□ 0.57
CCNL1-212ENST00000470121 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
CCNL1-212ENST00000470121 NRXN3Q9Y4C0 1643 aa18.59■□□□□ 0.57
CCNL1-212ENST00000470121 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms