RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 MYO5BQ9ULV0 1848 aa13.99□□□□□ -0.17
SHROOM3-203ENST00000469923 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
SHROOM3-203ENST00000469923 UNC13BO14795 1591 aa13.98□□□□□ -0.17
SHROOM3-203ENST00000469923 TOM1O60784 492 aa13.98□□□□□ -0.17
SHROOM3-203ENST00000469923 IQSEC2Q5JU85 1478 aa13.98□□□□□ -0.17
SHROOM3-203ENST00000469923 TMEM94Q12767 1356 aa13.96□□□□□ -0.17
SHROOM3-203ENST00000469923 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
SHROOM3-203ENST00000469923 ADGRB3O60242 1522 aa13.95□□□□□ -0.18
SHROOM3-203ENST00000469923 CPS1P31327 1500 aa13.95□□□□□ -0.18
SHROOM3-203ENST00000469923 TMEM131LA2VDJ0 1609 aa13.95□□□□□ -0.18
SHROOM3-203ENST00000469923 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
SHROOM3-203ENST00000469923 RPRD2Q5VT52 1461 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-203ENST00000469923 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
SHROOM3-203ENST00000469923 PTPRUQ92729 1446 aa13.93□□□□□ -0.18
SHROOM3-203ENST00000469923 ZNF326Q5BKZ1 582 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-203ENST00000469923 TBX22Q9Y458 520 aa13.93□□□□□ -0.18
SHROOM3-203ENST00000469923 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
SHROOM3-203ENST00000469923 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
SHROOM3-203ENST00000469923 PLEKHG1Q9ULL1 1385 aa13.92□□□□□ -0.18
SHROOM3-203ENST00000469923 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
SHROOM3-203ENST00000469923 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
SHROOM3-203ENST00000469923 METP08581 1390 aa13.89□□□□□ -0.19
SHROOM3-203ENST00000469923 SOCS7O14512 581 aa13.89□□□□□ -0.19
SHROOM3-203ENST00000469923 HFM1A2PYH4 1435 aa13.89□□□□□ -0.19
SHROOM3-203ENST00000469923 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHROOM3-203ENST00000469923 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
SHROOM3-203ENST00000469923 RGL3Q3MIN7 710 aa13.87□□□□□ -0.19
SHROOM3-203ENST00000469923 SLAIN2Q9P270 581 aa13.86□□□□□ -0.19
SHROOM3-203ENST00000469923 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
SHROOM3-203ENST00000469923 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
SHROOM3-203ENST00000469923 CLTCL1P53675 1640 aa13.85□□□□□ -0.19
SHROOM3-203ENST00000469923 DDX17Q92841 729 aaKnown RBP13.84□□□□□ -0.19
SHROOM3-203ENST00000469923 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
SHROOM3-203ENST00000469923 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
SHROOM3-203ENST00000469923 C14orf37Q86TY3 774 aa13.82□□□□□ -0.2
SHROOM3-203ENST00000469923 CHD2O14647 1828 aaKnown RBP13.8□□□□□ -0.2
SHROOM3-203ENST00000469923 NRXN3Q9Y4C0 1643 aa13.8□□□□□ -0.2
SHROOM3-203ENST00000469923 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
SHROOM3-203ENST00000469923 FAM135BQ49AJ0 1406 aa13.8□□□□□ -0.2
SHROOM3-203ENST00000469923 SPHKAPQ2M3C7 1700 aa13.79□□□□□ -0.2
SHROOM3-203ENST00000469923 C19orf44Q9H6X5 657 aa13.78□□□□□ -0.2
SHROOM3-203ENST00000469923 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
SHROOM3-203ENST00000469923 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
SHROOM3-203ENST00000469923 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
SHROOM3-203ENST00000469923 TRPM2O94759 1503 aa13.77□□□□□ -0.21
SHROOM3-203ENST00000469923 MSH6P52701 1360 aa13.77□□□□□ -0.21
SHROOM3-203ENST00000469923 RAB3GAP2Q9H2M9 1393 aa13.77□□□□□ -0.21
SHROOM3-203ENST00000469923 STK26Q9P289 416 aa13.77□□□□□ -0.21
SHROOM3-203ENST00000469923 ROBO2Q9HCK4 1378 aa13.76□□□□□ -0.21
SHROOM3-203ENST00000469923 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
SHROOM3-203ENST00000469923 WAPLQ7Z5K2 1190 aa13.76□□□□□ -0.21
SHROOM3-203ENST00000469923 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
SHROOM3-203ENST00000469923 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
SHROOM3-203ENST00000469923 ATF3P18847 181 aa13.74□□□□□ -0.21
SHROOM3-203ENST00000469923 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
SHROOM3-203ENST00000469923 SPATA31E1Q6ZUB1 1445 aa13.73□□□□□ -0.21
SHROOM3-203ENST00000469923 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
SHROOM3-203ENST00000469923 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
SHROOM3-203ENST00000469923 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
SHROOM3-203ENST00000469923 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
SHROOM3-203ENST00000469923 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
SHROOM3-203ENST00000469923 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.21
SHROOM3-203ENST00000469923 SETBP1Q9Y6X0 1596 aa13.71□□□□□ -0.21
SHROOM3-203ENST00000469923 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.21
SHROOM3-203ENST00000469923 CFAP70Q5T0N1 1121 aa13.71□□□□□ -0.21
SHROOM3-203ENST00000469923 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
SHROOM3-203ENST00000469923 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
SHROOM3-203ENST00000469923 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
SHROOM3-203ENST00000469923 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
SHROOM3-203ENST00000469923 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
SHROOM3-203ENST00000469923 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
SHROOM3-203ENST00000469923 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
SHROOM3-203ENST00000469923 ANKRD30BQ9BXX2 1392 aa13.68□□□□□ -0.22
SHROOM3-203ENST00000469923 KIF1BO60333 1816 aa13.67□□□□□ -0.22
SHROOM3-203ENST00000469923 CCDC144AA2RUR9 1427 aa13.67□□□□□ -0.22
SHROOM3-203ENST00000469923 MST1RQ04912 1400 aa13.67□□□□□ -0.22
SHROOM3-203ENST00000469923 XRN1Q8IZH2 1706 aaKnown RBP13.67□□□□□ -0.22
SHROOM3-203ENST00000469923 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
SHROOM3-203ENST00000469923 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHROOM3-203ENST00000469923 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
SHROOM3-203ENST00000469923 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
SHROOM3-203ENST00000469923 SETD1AO15047 1707 aaKnown RBP13.64□□□□□ -0.23
SHROOM3-203ENST00000469923 C14orf93Q9H972 538 aaKnown RBP13.64□□□□□ -0.23
SHROOM3-203ENST00000469923 LRP6O75581 1613 aa13.64□□□□□ -0.23
SHROOM3-203ENST00000469923 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
SHROOM3-203ENST00000469923 PPLO60437 1756 aa13.63□□□□□ -0.23
SHROOM3-203ENST00000469923 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
SHROOM3-203ENST00000469923 DCAF11Q8TEB1 546 aa13.62□□□□□ -0.23
SHROOM3-203ENST00000469923 ADGRL3Q9HAR2 1447 aa13.62□□□□□ -0.23
SHROOM3-203ENST00000469923 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
SHROOM3-203ENST00000469923 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
SHROOM3-203ENST00000469923 JCADQ9P266 1359 aa13.61□□□□□ -0.23
SHROOM3-203ENST00000469923 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
SHROOM3-203ENST00000469923 SIN3AQ96ST3 1273 aa13.6□□□□□ -0.23
SHROOM3-203ENST00000469923 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
SHROOM3-203ENST00000469923 FOXO3O43524 673 aa13.59□□□□□ -0.23
SHROOM3-203ENST00000469923 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
SHROOM3-203ENST00000469923 ESCO1Q5FWF5 840 aa13.59□□□□□ -0.23
SHROOM3-203ENST00000469923 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
SHROOM3-203ENST00000469923 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms