RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
SMC4-210ENST00000469762 SYNMO15061 1565 aa13.53□□□□□ -0.24
SMC4-210ENST00000469762 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
SMC4-210ENST00000469762 PPM1GO15355 546 aaPredicted RBP13.51□□□□□ -0.25
SMC4-210ENST00000469762 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
SMC4-210ENST00000469762 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
SMC4-210ENST00000469762 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
SMC4-210ENST00000469762 CEP152O94986 1710 aa13.5□□□□□ -0.25
SMC4-210ENST00000469762 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
SMC4-210ENST00000469762 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
SMC4-210ENST00000469762 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
SMC4-210ENST00000469762 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
SMC4-210ENST00000469762 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
SMC4-210ENST00000469762 CLTCL1P53675 1640 aa13.48□□□□□ -0.25
SMC4-210ENST00000469762 VIRMAQ69YN4 1812 aaKnown RBP13.48□□□□□ -0.25
SMC4-210ENST00000469762 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
SMC4-210ENST00000469762 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
SMC4-210ENST00000469762 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
SMC4-210ENST00000469762 TRPM2O94759 1503 aa13.47□□□□□ -0.25
SMC4-210ENST00000469762 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
SMC4-210ENST00000469762 ABCC2Q92887 1545 aa13.47□□□□□ -0.25
SMC4-210ENST00000469762 SCAPERQ9BY12 1400 aa13.46□□□□□ -0.25
SMC4-210ENST00000469762 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
SMC4-210ENST00000469762 SCAF11Q99590 1463 aaKnown RBP13.46□□□□□ -0.25
SMC4-210ENST00000469762 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.25
SMC4-210ENST00000469762 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
SMC4-210ENST00000469762 USP19O94966 1318 aa13.46□□□□□ -0.26
SMC4-210ENST00000469762 BCAR3O75815 825 aa13.45□□□□□ -0.26
SMC4-210ENST00000469762 PTPRTO14522 1441 aa13.45□□□□□ -0.26
SMC4-210ENST00000469762 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
SMC4-210ENST00000469762 ABCC1P33527 1531 aa13.45□□□□□ -0.26
SMC4-210ENST00000469762 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.265e-20■■■■■ 85.2
SMC4-210ENST00000469762 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
SMC4-210ENST00000469762 IGHDP01880 384 aa13.44□□□□□ -0.26
SMC4-210ENST00000469762 GSE1Q14687 1217 aa13.44□□□□□ -0.26
SMC4-210ENST00000469762 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
SMC4-210ENST00000469762 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
SMC4-210ENST00000469762 DEPDC5O75140 1603 aa13.43□□□□□ -0.26
SMC4-210ENST00000469762 PLCH2O75038 1416 aa13.43□□□□□ -0.26
SMC4-210ENST00000469762 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
SMC4-210ENST00000469762 APAF1O14727 1248 aa13.42□□□□□ -0.26
SMC4-210ENST00000469762 FRAT1Q92837 279 aaPredicted RBP13.42□□□□□ -0.26
SMC4-210ENST00000469762 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
SMC4-210ENST00000469762 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
SMC4-210ENST00000469762 ERVK-7P63135 1459 aa13.41□□□□□ -0.26
SMC4-210ENST00000469762 RGS3P49796 1198 aa13.41□□□□□ -0.26
SMC4-210ENST00000469762 NLRP1Q9C000 1473 aa13.4□□□□□ -0.26
SMC4-210ENST00000469762 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
SMC4-210ENST00000469762 SEC24BO95487 1268 aa13.4□□□□□ -0.26
SMC4-210ENST00000469762 ZFYVE16Q7Z3T8 1539 aa13.4□□□□□ -0.27
SMC4-210ENST00000469762 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
SMC4-210ENST00000469762 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
SMC4-210ENST00000469762 VWDEQ8N2E2 1590 aa13.39□□□□□ -0.27
SMC4-210ENST00000469762 ABCA6Q8N139 1617 aa13.39□□□□□ -0.27
SMC4-210ENST00000469762 TET3O43151 1660 aa13.38□□□□□ -0.27
SMC4-210ENST00000469762 UGGT1Q9NYU2 1555 aa13.38□□□□□ -0.27
SMC4-210ENST00000469762 IFT172Q9UG01 1749 aa13.37□□□□□ -0.27
SMC4-210ENST00000469762 MAP3K4Q9Y6R4 1608 aa13.37□□□□□ -0.27
SMC4-210ENST00000469762 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
SMC4-210ENST00000469762 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
SMC4-210ENST00000469762 AFAP1Q8N556 730 aa13.36□□□□□ -0.27
SMC4-210ENST00000469762 MROH1Q8NDA8 1641 aa13.36□□□□□ -0.27
SMC4-210ENST00000469762 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
SMC4-210ENST00000469762 E9PSI1 815 aa13.35□□□□□ -0.27
SMC4-210ENST00000469762 MYO3AQ8NEV4 1616 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 PANK1Q8TE04 598 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
SMC4-210ENST00000469762 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
SMC4-210ENST00000469762 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.28
SMC4-210ENST00000469762 TNNQ9UQP3 1299 aa13.33□□□□□ -0.28
SMC4-210ENST00000469762 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
SMC4-210ENST00000469762 MYOM2P54296 1465 aa13.32□□□□□ -0.28
SMC4-210ENST00000469762 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
SMC4-210ENST00000469762 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
SMC4-210ENST00000469762 POLR3AO14802 1390 aaPredicted RBP13.32□□□□□ -0.28
SMC4-210ENST00000469762 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
SMC4-210ENST00000469762 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
SMC4-210ENST00000469762 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
SMC4-210ENST00000469762 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
SMC4-210ENST00000469762 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
SMC4-210ENST00000469762 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
SMC4-210ENST00000469762 RLBP1P12271 317 aa13.3□□□□□ -0.28
SMC4-210ENST00000469762 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
SMC4-210ENST00000469762 CGNL1Q0VF96 1302 aa13.3□□□□□ -0.28
SMC4-210ENST00000469762 PCDHB15Q9Y5E8 787 aa13.3□□□□□ -0.28
SMC4-210ENST00000469762 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
SMC4-210ENST00000469762 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
SMC4-210ENST00000469762 CENPJQ9HC77 1338 aaPredicted RBP13.28□□□□□ -0.28
SMC4-210ENST00000469762 UHRF1BP1LA0JNW5 1464 aa13.28□□□□□ -0.28
SMC4-210ENST00000469762 KIF1BO60333 1816 aa13.28□□□□□ -0.28
SMC4-210ENST00000469762 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
SMC4-210ENST00000469762 ARAP3Q8WWN8 1544 aa13.28□□□□□ -0.28
SMC4-210ENST00000469762 RARSP54136 660 aaKnown RBP13.28□□□□□ -0.28
SMC4-210ENST00000469762 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
SMC4-210ENST00000469762 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
SMC4-210ENST00000469762 POGKQ9P215 609 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms