RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
TRAPPC3-206ENST00000469757 PPLO60437 1756 aa12.36□□□□□ -0.43
TRAPPC3-206ENST00000469757 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
TRAPPC3-206ENST00000469757 CPS1P31327 1500 aa12.36□□□□□ -0.43
TRAPPC3-206ENST00000469757 CCDC144AA2RUR9 1427 aa12.36□□□□□ -0.43
TRAPPC3-206ENST00000469757 PLEKHG1Q9ULL1 1385 aa12.35□□□□□ -0.43
TRAPPC3-206ENST00000469757 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
TRAPPC3-206ENST00000469757 LTKP29376 864 aa12.34□□□□□ -0.43
TRAPPC3-206ENST00000469757 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
TRAPPC3-206ENST00000469757 ANKRD30BQ9BXX2 1392 aa12.33□□□□□ -0.44
TRAPPC3-206ENST00000469757 NKTRP30414 1462 aaKnown RBP12.32□□□□□ -0.44
TRAPPC3-206ENST00000469757 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
TRAPPC3-206ENST00000469757 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
TRAPPC3-206ENST00000469757 EID1Q9Y6B2 187 aa12.31□□□□□ -0.44
TRAPPC3-206ENST00000469757 PRAG1Q86YV5 1406 aa12.3□□□□□ -0.44
TRAPPC3-206ENST00000469757 MYOM2P54296 1465 aa12.3□□□□□ -0.44
TRAPPC3-206ENST00000469757 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-206ENST00000469757 TXNDC2Q86VQ3 553 aa12.3□□□□□ -0.44
TRAPPC3-206ENST00000469757 XRN1Q8IZH2 1706 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-206ENST00000469757 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
TRAPPC3-206ENST00000469757 FOXD1Q16676 465 aa12.29□□□□□ -0.44
TRAPPC3-206ENST00000469757 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAPPC3-206ENST00000469757 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC3-206ENST00000469757 LAMC1P11047 1609 aa12.28□□□□□ -0.44
TRAPPC3-206ENST00000469757 PIK3R4Q99570 1358 aa12.28□□□□□ -0.44
TRAPPC3-206ENST00000469757 CHD2O14647 1828 aaKnown RBP12.27□□□□□ -0.44
TRAPPC3-206ENST00000469757 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.45
TRAPPC3-206ENST00000469757 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-206ENST00000469757 PIK3C2GO75747 1445 aa12.26□□□□□ -0.45
TRAPPC3-206ENST00000469757 LRRC7Q96NW7 1537 aa12.26□□□□□ -0.45
TRAPPC3-206ENST00000469757 HDGFP51858 240 aaKnown RBP12.25□□□□□ -0.45
TRAPPC3-206ENST00000469757 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
TRAPPC3-206ENST00000469757 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
TRAPPC3-206ENST00000469757 DHX57Q6P158 1386 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-206ENST00000469757 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC3-206ENST00000469757 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-206ENST00000469757 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
TRAPPC3-206ENST00000469757 CERKQ8TCT0 537 aa12.22□□□□□ -0.45
TRAPPC3-206ENST00000469757 TBX22Q9Y458 520 aa12.22□□□□□ -0.45
TRAPPC3-206ENST00000469757 PTCH1Q13635 1447 aa12.21□□□□□ -0.45
TRAPPC3-206ENST00000469757 PTPRUQ92729 1446 aa12.2□□□□□ -0.46
TRAPPC3-206ENST00000469757 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
TRAPPC3-206ENST00000469757 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC3-206ENST00000469757 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
TRAPPC3-206ENST00000469757 TECPR2O15040 1411 aa12.19□□□□□ -0.46
TRAPPC3-206ENST00000469757 NCOA3Q9Y6Q9 1424 aa12.19□□□□□ -0.46
TRAPPC3-206ENST00000469757 KIAA1210Q9ULL0 1709 aa12.18□□□□□ -0.46
TRAPPC3-206ENST00000469757 KCNA6P17658 529 aa12.18□□□□□ -0.46
TRAPPC3-206ENST00000469757 ADGRB1O14514 1584 aa12.18□□□□□ -0.46
TRAPPC3-206ENST00000469757 METP08581 1390 aa12.18□□□□□ -0.46
TRAPPC3-206ENST00000469757 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC3-206ENST00000469757 FBXO41Q8TF61 875 aa12.16□□□□□ -0.46
TRAPPC3-206ENST00000469757 NALCNQ8IZF0 1738 aa12.16□□□□□ -0.46
TRAPPC3-206ENST00000469757 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
TRAPPC3-206ENST00000469757 DCCP43146 1447 aa12.15□□□□□ -0.46
TRAPPC3-206ENST00000469757 TMEM94Q12767 1356 aa12.15□□□□□ -0.46
TRAPPC3-206ENST00000469757 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
TRAPPC3-206ENST00000469757 DLC1Q96QB1 1528 aa12.13□□□□□ -0.47
TRAPPC3-206ENST00000469757 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
TRAPPC3-206ENST00000469757 ADGRL3Q9HAR2 1447 aa12.12□□□□□ -0.47
TRAPPC3-206ENST00000469757 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-206ENST00000469757 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-206ENST00000469757 RGL3Q3MIN7 710 aa12.11□□□□□ -0.47
TRAPPC3-206ENST00000469757 BCANQ96GW7 911 aa12.11□□□□□ -0.47
TRAPPC3-206ENST00000469757 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-206ENST00000469757 ADGRB2O60241 1585 aa12.1□□□□□ -0.47
TRAPPC3-206ENST00000469757 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
TRAPPC3-206ENST00000469757 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
TRAPPC3-206ENST00000469757 ARHGEF28Q8N1W1 1705 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-206ENST00000469757 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
TRAPPC3-206ENST00000469757 ROBO2Q9HCK4 1378 aa12.09□□□□□ -0.47
TRAPPC3-206ENST00000469757 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
TRAPPC3-206ENST00000469757 MSH6P52701 1360 aa12.08□□□□□ -0.48
TRAPPC3-206ENST00000469757 AMOTL2Q9Y2J4 779 aa12.08□□□□□ -0.48
TRAPPC3-206ENST00000469757 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
TRAPPC3-206ENST00000469757 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
TRAPPC3-206ENST00000469757 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-206ENST00000469757 PROSER2Q86WR7 435 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-206ENST00000469757 DCAF11Q8TEB1 546 aa12.06□□□□□ -0.48
TRAPPC3-206ENST00000469757 SENP3Q9H4L4 574 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-206ENST00000469757 MST1RQ04912 1400 aa12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 TOM1O60784 492 aa12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 PCGF6Q9BYE7 350 aa12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-206ENST00000469757 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
TRAPPC3-206ENST00000469757 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
TRAPPC3-206ENST00000469757 NHSL1Q5SYE7 1610 aa12.03□□□□□ -0.48
TRAPPC3-206ENST00000469757 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
TRAPPC3-206ENST00000469757 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
TRAPPC3-206ENST00000469757 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
TRAPPC3-206ENST00000469757 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.49
TRAPPC3-206ENST00000469757 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-206ENST00000469757 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
TRAPPC3-206ENST00000469757 TONSLQ96HA7 1378 aa12□□□□□ -0.49
TRAPPC3-206ENST00000469757 PLEKHH1Q9ULM0 1364 aa12□□□□□ -0.49
TRAPPC3-206ENST00000469757 TMEM132EQ6IEE7 984 aa11.99□□□□□ -0.49
TRAPPC3-206ENST00000469757 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms