RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
ABCD4-205ENST00000469672 CHGAP10645 457 aaKnown RBP19.59■□□□□ 0.73
ABCD4-205ENST00000469672 BCANQ96GW7 911 aa19.59■□□□□ 0.73
ABCD4-205ENST00000469672 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
ABCD4-205ENST00000469672 PLEKHG1Q9ULL1 1385 aa19.58■□□□□ 0.73
ABCD4-205ENST00000469672 ALKQ9UM73 1620 aa19.58■□□□□ 0.73
ABCD4-205ENST00000469672 PPP1R15AO75807 674 aaPredicted RBP19.57■□□□□ 0.72
ABCD4-205ENST00000469672 NAIPQ13075 1403 aa19.57■□□□□ 0.72
ABCD4-205ENST00000469672 TBX22Q9Y458 520 aa19.56■□□□□ 0.72
ABCD4-205ENST00000469672 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
ABCD4-205ENST00000469672 TMEM94Q12767 1356 aa19.54■□□□□ 0.72
ABCD4-205ENST00000469672 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
ABCD4-205ENST00000469672 HFM1A2PYH4 1435 aa19.51■□□□□ 0.71
ABCD4-205ENST00000469672 ILDR2Q71H61 639 aa19.5■□□□□ 0.71
ABCD4-205ENST00000469672 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-205ENST00000469672 NKTRP30414 1462 aaKnown RBP19.49■□□□□ 0.71
ABCD4-205ENST00000469672 XIRP1Q702N8 1843 aaKnown RBP19.49■□□□□ 0.71
ABCD4-205ENST00000469672 NUTM2DQ5VT03 806 aaPredicted RBP19.49■□□□□ 0.71
ABCD4-205ENST00000469672 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
ABCD4-205ENST00000469672 TRIM52Q96A61 297 aa19.47■□□□□ 0.71
ABCD4-205ENST00000469672 RBM33Q96EV2 1170 aaKnown RBP19.47■□□□□ 0.71
ABCD4-205ENST00000469672 FAM135BQ49AJ0 1406 aa19.47■□□□□ 0.71
ABCD4-205ENST00000469672 ADAMTS13Q76LX8 1427 aa19.47■□□□□ 0.71
ABCD4-205ENST00000469672 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
ABCD4-205ENST00000469672 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
ABCD4-205ENST00000469672 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
ABCD4-205ENST00000469672 NCOA3Q9Y6Q9 1424 aa19.43■□□□□ 0.7
ABCD4-205ENST00000469672 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
ABCD4-205ENST00000469672 MSH6P52701 1360 aa19.43■□□□□ 0.7
ABCD4-205ENST00000469672 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
ABCD4-205ENST00000469672 DIP2AQ14689 1571 aa19.41■□□□□ 0.7
ABCD4-205ENST00000469672 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
ABCD4-205ENST00000469672 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
ABCD4-205ENST00000469672 TRPM2O94759 1503 aa19.4■□□□□ 0.7
ABCD4-205ENST00000469672 SOCS7O14512 581 aa19.38■□□□□ 0.69
ABCD4-205ENST00000469672 C19orf44Q9H6X5 657 aa19.37■□□□□ 0.69
ABCD4-205ENST00000469672 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
ABCD4-205ENST00000469672 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
ABCD4-205ENST00000469672 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
ABCD4-205ENST00000469672 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
ABCD4-205ENST00000469672 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
ABCD4-205ENST00000469672 ACIN1Q9UKV3 1341 aaKnown RBP19.34■□□□□ 0.69
ABCD4-205ENST00000469672 VGFO15240 615 aaPredicted RBP19.34■□□□□ 0.69
ABCD4-205ENST00000469672 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
ABCD4-205ENST00000469672 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
ABCD4-205ENST00000469672 NEXMIFQ5QGS0 1516 aa19.32■□□□□ 0.68
ABCD4-205ENST00000469672 NRXN3Q9Y4C0 1643 aa19.32■□□□□ 0.68
ABCD4-205ENST00000469672 METP08581 1390 aa19.32■□□□□ 0.68
ABCD4-205ENST00000469672 KIF1BO60333 1816 aa19.31■□□□□ 0.68
ABCD4-205ENST00000469672 ATF3P18847 181 aa19.31■□□□□ 0.68
ABCD4-205ENST00000469672 MPHOSPH9Q99550 1183 aa19.31■□□□□ 0.68
ABCD4-205ENST00000469672 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
ABCD4-205ENST00000469672 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
ABCD4-205ENST00000469672 FOXD1Q16676 465 aa19.29■□□□□ 0.68
ABCD4-205ENST00000469672 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
ABCD4-205ENST00000469672 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
ABCD4-205ENST00000469672 DCCP43146 1447 aa19.25■□□□□ 0.67
ABCD4-205ENST00000469672 CCDC144AA2RUR9 1427 aa19.24■□□□□ 0.67
ABCD4-205ENST00000469672 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
ABCD4-205ENST00000469672 JCADQ9P266 1359 aa19.21■□□□□ 0.67
ABCD4-205ENST00000469672 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
ABCD4-205ENST00000469672 BRINP3Q76B58 766 aa19.2■□□□□ 0.66
ABCD4-205ENST00000469672 SPATA31E1Q6ZUB1 1445 aa19.19■□□□□ 0.66
ABCD4-205ENST00000469672 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
ABCD4-205ENST00000469672 PHLPP1O60346 1717 aa19.18■□□□□ 0.66
ABCD4-205ENST00000469672 ANKRD30BQ9BXX2 1392 aa19.18■□□□□ 0.66
ABCD4-205ENST00000469672 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
ABCD4-205ENST00000469672 ADGRF5Q8IZF2 1346 aa19.17■□□□□ 0.66
ABCD4-205ENST00000469672 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
ABCD4-205ENST00000469672 PRAG1Q86YV5 1406 aa19.17■□□□□ 0.66
ABCD4-205ENST00000469672 PPLO60437 1756 aa19.16■□□□□ 0.66
ABCD4-205ENST00000469672 MST1RQ04912 1400 aa19.16■□□□□ 0.66
ABCD4-205ENST00000469672 AHDC1Q5TGY3 1603 aaPredicted RBP19.15■□□□□ 0.66
ABCD4-205ENST00000469672 RAB3GAP2Q9H2M9 1393 aa19.15■□□□□ 0.66
ABCD4-205ENST00000469672 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
ABCD4-205ENST00000469672 COL16A1Q07092 1604 aaPredicted RBP19.14■□□□□ 0.66
ABCD4-205ENST00000469672 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.66
ABCD4-205ENST00000469672 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
ABCD4-205ENST00000469672 HRCP23327 699 aa19.13■□□□□ 0.65
ABCD4-205ENST00000469672 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
ABCD4-205ENST00000469672 POTEAQ6S8J7 498 aa19.09■□□□□ 0.65
ABCD4-205ENST00000469672 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
ABCD4-205ENST00000469672 C1orf167Q5SNV9 1468 aa19.08■□□□□ 0.64
ABCD4-205ENST00000469672 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.64
ABCD4-205ENST00000469672 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
ABCD4-205ENST00000469672 PIK3C2GO75747 1445 aa19.07■□□□□ 0.64
ABCD4-205ENST00000469672 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
ABCD4-205ENST00000469672 C14orf93Q9H972 538 aaKnown RBP19.06■□□□□ 0.64
ABCD4-205ENST00000469672 TECPR2O15040 1411 aa19.06■□□□□ 0.64
ABCD4-205ENST00000469672 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
ABCD4-205ENST00000469672 SIRT1Q96EB6 747 aa19.05■□□□□ 0.64
ABCD4-205ENST00000469672 STK26Q9P289 416 aa19.05■□□□□ 0.64
ABCD4-205ENST00000469672 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
ABCD4-205ENST00000469672 DDX17Q92841 729 aaKnown RBP19.04■□□□□ 0.64
ABCD4-205ENST00000469672 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
ABCD4-205ENST00000469672 MEX3CQ5U5Q3 659 aaKnown RBP19.03■□□□□ 0.64
ABCD4-205ENST00000469672 WAPLQ7Z5K2 1190 aa19.03■□□□□ 0.64
ABCD4-205ENST00000469672 SHPRHQ149N8 1683 aa19.03■□□□□ 0.64
ABCD4-205ENST00000469672 LRP6O75581 1613 aa19.02■□□□□ 0.64
ABCD4-205ENST00000469672 NHSL1Q5SYE7 1610 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms