RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
LMNA-210ENST00000469565 KIF1BO60333 1816 aa19.92■□□□□ 0.78
LMNA-210ENST00000469565 MYO5BQ9ULV0 1848 aa19.92■□□□□ 0.78
LMNA-210ENST00000469565 MED14O60244 1454 aa19.92■□□□□ 0.78
LMNA-210ENST00000469565 CLTCL1P53675 1640 aa19.91■□□□□ 0.78
LMNA-210ENST00000469565 ANKRD30BQ9BXX2 1392 aa19.91■□□□□ 0.78
LMNA-210ENST00000469565 CCDC144AA2RUR9 1427 aa19.91■□□□□ 0.78
LMNA-210ENST00000469565 ALKQ9UM73 1620 aa19.91■□□□□ 0.78
LMNA-210ENST00000469565 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
LMNA-210ENST00000469565 CCER1Q8TC90 406 aaPredicted RBP19.88■□□□□ 0.77
LMNA-210ENST00000469565 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
LMNA-210ENST00000469565 ZNF326Q5BKZ1 582 aaKnown RBP19.87■□□□□ 0.77
LMNA-210ENST00000469565 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
LMNA-210ENST00000469565 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
LMNA-210ENST00000469565 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
LMNA-210ENST00000469565 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
LMNA-210ENST00000469565 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
LMNA-210ENST00000469565 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
LMNA-210ENST00000469565 LRRC7Q96NW7 1537 aa19.84■□□□□ 0.77
LMNA-210ENST00000469565 STRCP1A6NGW2 1772 aa19.82■□□□□ 0.76
LMNA-210ENST00000469565 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
LMNA-210ENST00000469565 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
LMNA-210ENST00000469565 EID1Q9Y6B2 187 aa19.79■□□□□ 0.76
LMNA-210ENST00000469565 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
LMNA-210ENST00000469565 RGS17Q9UGC6 210 aaPredicted RBP19.78■□□□□ 0.76
LMNA-210ENST00000469565 HDGFP51858 240 aaKnown RBP19.77■□□□□ 0.76
LMNA-210ENST00000469565 TMEM2Q9UHN6 1383 aa19.77■□□□□ 0.76
LMNA-210ENST00000469565 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
LMNA-210ENST00000469565 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
LMNA-210ENST00000469565 BCANQ96GW7 911 aa19.75■□□□□ 0.75
LMNA-210ENST00000469565 LTKP29376 864 aa19.74■□□□□ 0.75
LMNA-210ENST00000469565 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
LMNA-210ENST00000469565 SPATA31E1Q6ZUB1 1445 aa19.74■□□□□ 0.75
LMNA-210ENST00000469565 SLIT1O75093 1534 aa19.73■□□□□ 0.75
LMNA-210ENST00000469565 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
LMNA-210ENST00000469565 ARHGAP23Q9P227 1491 aa19.72■□□□□ 0.75
LMNA-210ENST00000469565 RPGRIP1LQ68CZ1 1315 aa19.72■□□□□ 0.75
LMNA-210ENST00000469565 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
LMNA-210ENST00000469565 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
LMNA-210ENST00000469565 PPLO60437 1756 aa19.7■□□□□ 0.74
LMNA-210ENST00000469565 DCAF11Q8TEB1 546 aa19.7■□□□□ 0.74
LMNA-210ENST00000469565 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
LMNA-210ENST00000469565 VGFO15240 615 aaPredicted RBP19.69■□□□□ 0.74
LMNA-210ENST00000469565 NEXMIFQ5QGS0 1516 aa19.69■□□□□ 0.74
LMNA-210ENST00000469565 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
LMNA-210ENST00000469565 IFT172Q9UG01 1749 aa19.66■□□□□ 0.74
LMNA-210ENST00000469565 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
LMNA-210ENST00000469565 XIRP1Q702N8 1843 aaKnown RBP19.66■□□□□ 0.74
LMNA-210ENST00000469565 FAM135BQ49AJ0 1406 aa19.66■□□□□ 0.74
LMNA-210ENST00000469565 POTEAQ6S8J7 498 aa19.65■□□□□ 0.74
LMNA-210ENST00000469565 ADGRF5Q8IZF2 1346 aa19.64■□□□□ 0.73
LMNA-210ENST00000469565 PLEKHG1Q9ULL1 1385 aa19.62■□□□□ 0.73
LMNA-210ENST00000469565 SLC26A8Q96RN1 970 aa19.62■□□□□ 0.73
LMNA-210ENST00000469565 STAC3Q96MF2 364 aa19.58■□□□□ 0.72
LMNA-210ENST00000469565 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
LMNA-210ENST00000469565 MYOM2P54296 1465 aa19.57■□□□□ 0.72
LMNA-210ENST00000469565 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
LMNA-210ENST00000469565 KCNA6P17658 529 aa19.55■□□□□ 0.72
LMNA-210ENST00000469565 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
LMNA-210ENST00000469565 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
LMNA-210ENST00000469565 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
LMNA-210ENST00000469565 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
LMNA-210ENST00000469565 ADAMTS13Q76LX8 1427 aa19.53■□□□□ 0.72
LMNA-210ENST00000469565 CFAP70Q5T0N1 1121 aa19.53■□□□□ 0.72
LMNA-210ENST00000469565 PIK3C2GO75747 1445 aa19.52■□□□□ 0.72
LMNA-210ENST00000469565 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.72
LMNA-210ENST00000469565 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
LMNA-210ENST00000469565 NRXN1Q9ULB1 1477 aa19.51■□□□□ 0.71
LMNA-210ENST00000469565 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
LMNA-210ENST00000469565 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
LMNA-210ENST00000469565 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
LMNA-210ENST00000469565 NBPF8Q3BBV2 869 aa19.49■□□□□ 0.71
LMNA-210ENST00000469565 TMEM132EQ6IEE7 984 aa19.49■□□□□ 0.71
LMNA-210ENST00000469565 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
LMNA-210ENST00000469565 METP08581 1390 aa19.48■□□□□ 0.71
LMNA-210ENST00000469565 MSH6P52701 1360 aa19.47■□□□□ 0.71
LMNA-210ENST00000469565 JCADQ9P266 1359 aa19.47■□□□□ 0.71
LMNA-210ENST00000469565 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
LMNA-210ENST00000469565 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
LMNA-210ENST00000469565 STK26Q9P289 416 aa19.47■□□□□ 0.71
LMNA-210ENST00000469565 LAMC1P11047 1609 aa19.47■□□□□ 0.71
LMNA-210ENST00000469565 PHLPP1O60346 1717 aa19.46■□□□□ 0.71
LMNA-210ENST00000469565 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
LMNA-210ENST00000469565 NKTRP30414 1462 aaKnown RBP19.45■□□□□ 0.7
LMNA-210ENST00000469565 NBPF1Q3BBV0 1214 aa19.44■□□□□ 0.7
LMNA-210ENST00000469565 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
LMNA-210ENST00000469565 PIK3R4Q99570 1358 aa19.43■□□□□ 0.7
LMNA-210ENST00000469565 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
LMNA-210ENST00000469565 TRPM1Q7Z4N2 1603 aa19.42■□□□□ 0.7
LMNA-210ENST00000469565 NWD1Q149M9 1564 aa19.41■□□□□ 0.7
LMNA-210ENST00000469565 ROCK2O75116 1388 aaKnown RBP19.41■□□□□ 0.7
LMNA-210ENST00000469565 ZNF772Q68DY9 489 aaPredicted RBP19.4■□□□□ 0.7
LMNA-210ENST00000469565 UPF1Q92900 1129 aaKnown RBP eCLIP19.4■□□□□ 0.7
LMNA-210ENST00000469565 MEX3CQ5U5Q3 659 aaKnown RBP19.39■□□□□ 0.69
LMNA-210ENST00000469565 TRAK1Q9UPV9 953 aa19.39■□□□□ 0.69
LMNA-210ENST00000469565 ASXL1Q8IXJ9 1541 aa19.39■□□□□ 0.69
LMNA-210ENST00000469565 SPATA31A6Q5VVP1 1343 aa19.38■□□□□ 0.69
LMNA-210ENST00000469565 YTHDC2Q9H6S0 1430 aaKnown RBP19.38■□□□□ 0.69
LMNA-210ENST00000469565 LRPPRCP42704 1394 aaKnown RBP19.37■□□□□ 0.69
LMNA-210ENST00000469565 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms