RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 CDHR5Q9HBB8 845 aa10.83□□□□□ -0.68
TMC1-203ENST00000469455 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
TMC1-203ENST00000469455 ARXQ96QS3 562 aa10.82□□□□□ -0.68
TMC1-203ENST00000469455 KDM4FA0A1W2PPD8 638 aa10.81□□□□□ -0.68
TMC1-203ENST00000469455 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
TMC1-203ENST00000469455 CLIP1P30622 1438 aa10.81□□□□□ -0.68
TMC1-203ENST00000469455 JPH4Q96JJ6 628 aa10.8□□□□□ -0.68
TMC1-203ENST00000469455 ARHGAP35Q9NRY4 1499 aa10.8□□□□□ -0.68
TMC1-203ENST00000469455 KIAA0556O60303 1618 aa10.8□□□□□ -0.68
TMC1-203ENST00000469455 GIGYF2Q6Y7W6 1299 aaKnown RBP10.79□□□□□ -0.68
TMC1-203ENST00000469455 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
TMC1-203ENST00000469455 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
TMC1-203ENST00000469455 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
TMC1-203ENST00000469455 TSR1Q2NL82 804 aaKnown RBP10.78□□□□□ -0.68
TMC1-203ENST00000469455 ARAP1Q96P48 1450 aa10.77□□□□□ -0.69
TMC1-203ENST00000469455 CLCN1P35523 988 aa10.76□□□□□ -0.69
TMC1-203ENST00000469455 ZEB1P37275 1124 aaPredicted RBP10.76□□□□□ -0.69
TMC1-203ENST00000469455 FOSBP53539 338 aa10.76□□□□□ -0.69
TMC1-203ENST00000469455 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
TMC1-203ENST00000469455 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
TMC1-203ENST00000469455 MS4A1P11836 297 aa10.75□□□□□ -0.69
TMC1-203ENST00000469455 REPIN1Q9BWE0 567 aaKnown RBP10.75□□□□□ -0.69
TMC1-203ENST00000469455 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
TMC1-203ENST00000469455 C6orf132Q5T0Z8 1188 aa10.73□□□□□ -0.69
TMC1-203ENST00000469455 ZMYND15Q9H091 742 aa10.73□□□□□ -0.69
TMC1-203ENST00000469455 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
TMC1-203ENST00000469455 FHOD3Q2V2M9 1422 aa10.73□□□□□ -0.69
TMC1-203ENST00000469455 PRG4Q92954 1404 aaPredicted RBP10.73□□□□□ -0.69
TMC1-203ENST00000469455 OATP04181 439 aa10.72□□□□□ -0.69
TMC1-203ENST00000469455 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
TMC1-203ENST00000469455 ZDHHC16Q969W1 377 aa10.72□□□□□ -0.69
TMC1-203ENST00000469455 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
TMC1-203ENST00000469455 MDM2Q00987 491 aaPredicted RBP10.71□□□□□ -0.69
TMC1-203ENST00000469455 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
TMC1-203ENST00000469455 VPS8Q8N3P4 1428 aa10.7□□□□□ -0.7
TMC1-203ENST00000469455 RANGAP1P46060 587 aaPredicted RBP10.7□□□□□ -0.7
TMC1-203ENST00000469455 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
TMC1-203ENST00000469455 ZSWIM6Q9HCJ5 1215 aa10.7□□□□□ -0.7
TMC1-203ENST00000469455 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
TMC1-203ENST00000469455 PPARGC1BQ86YN6 1023 aaKnown RBP10.69□□□□□ -0.7
TMC1-203ENST00000469455 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
TMC1-203ENST00000469455 PCF11O94913 1555 aaKnown RBP10.69□□□□□ -0.7
TMC1-203ENST00000469455 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
TMC1-203ENST00000469455 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
TMC1-203ENST00000469455 NUDT7P0C024 238 aa10.68□□□□□ -0.7
TMC1-203ENST00000469455 ARSIQ5FYB1 569 aa10.68□□□□□ -0.7
TMC1-203ENST00000469455 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
TMC1-203ENST00000469455 PCMTD1Q96MG8 357 aaPredicted RBP10.68□□□□□ -0.7
TMC1-203ENST00000469455 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
TMC1-203ENST00000469455 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
TMC1-203ENST00000469455 FLIIQ13045 1269 aa10.67□□□□□ -0.7
TMC1-203ENST00000469455 PADI6Q6TGC4 694 aa10.67□□□□□ -0.7
TMC1-203ENST00000469455 TTC13Q8NBP0 860 aa10.67□□□□□ -0.7
TMC1-203ENST00000469455 ARHGEF11O15085 1522 aa10.67□□□□□ -0.7
TMC1-203ENST00000469455 ABCA8O94911 1581 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 ADGRG1Q9Y653 693 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 FYCO1Q9BQS8 1478 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 RIMBP3CA6NJZ7 1639 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 RIMBP3BA6NNM3 1639 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 RIMBP3Q9UFD9 1639 aa10.66□□□□□ -0.7
TMC1-203ENST00000469455 POTEJP0CG39 1038 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 FAM161AQ3B820 660 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 HOMEZQ8IX15 550 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
TMC1-203ENST00000469455 ADAM33Q9BZ11 813 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 CASKIN1Q8WXD9 1431 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 HECW1Q76N89 1606 aa10.65□□□□□ -0.7
TMC1-203ENST00000469455 CFAP43Q8NDM7 1665 aa10.64□□□□□ -0.71
TMC1-203ENST00000469455 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
TMC1-203ENST00000469455 PRSS12P56730 875 aa10.63□□□□□ -0.71
TMC1-203ENST00000469455 PTPRGP23470 1445 aa10.62□□□□□ -0.71
TMC1-203ENST00000469455 SKIV2LQ15477 1246 aaKnown RBP10.62□□□□□ -0.71
TMC1-203ENST00000469455 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
TMC1-203ENST00000469455 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
TMC1-203ENST00000469455 RBM46Q8TBY0 533 aaKnown RBP10.61□□□□□ -0.71
TMC1-203ENST00000469455 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
TMC1-203ENST00000469455 PLB1Q6P1J6 1458 aa10.61□□□□□ -0.71
TMC1-203ENST00000469455 MAP3K1Q13233 1512 aa10.6□□□□□ -0.71
TMC1-203ENST00000469455 ABCC2Q92887 1545 aa10.6□□□□□ -0.71
TMC1-203ENST00000469455 PSDA5PKW4 1024 aaPredicted RBP10.6□□□□□ -0.71
TMC1-203ENST00000469455 SCUBE2Q9NQ36 999 aa10.6□□□□□ -0.71
TMC1-203ENST00000469455 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
TMC1-203ENST00000469455 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
TMC1-203ENST00000469455 ADCY10Q96PN6 1610 aa10.59□□□□□ -0.71
TMC1-203ENST00000469455 POTEB2H3BUK9 544 aa10.59□□□□□ -0.71
TMC1-203ENST00000469455 ONECUT3O60422 494 aaPredicted RBP10.59□□□□□ -0.71
TMC1-203ENST00000469455 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
TMC1-203ENST00000469455 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
TMC1-203ENST00000469455 UHRF1BP1LA0JNW5 1464 aa10.59□□□□□ -0.71
TMC1-203ENST00000469455 UACAQ9BZF9 1416 aa10.58□□□□□ -0.72
TMC1-203ENST00000469455 CCDC18Q5T9S5 1454 aa10.58□□□□□ -0.72
TMC1-203ENST00000469455 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
TMC1-203ENST00000469455 LHX6Q9UPM6 363 aa10.58□□□□□ -0.72
TMC1-203ENST00000469455 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
TMC1-203ENST00000469455 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms