RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
UBE3C-204ENST00000469336 TMEM134Q9H6X4 195 aa12.22□□□□□ -0.45
UBE3C-204ENST00000469336 COPS2P61201 443 aa12.21□□□□□ -0.45
UBE3C-204ENST00000469336 GNPATO15228 680 aa12.2□□□□□ -0.46
UBE3C-204ENST00000469336 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
UBE3C-204ENST00000469336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBE3C-204ENST00000469336 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
UBE3C-204ENST00000469336 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
UBE3C-204ENST00000469336 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
UBE3C-204ENST00000469336 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
UBE3C-204ENST00000469336 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
UBE3C-204ENST00000469336 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
UBE3C-204ENST00000469336 SLC10A3P09131 477 aa12.16□□□□□ -0.46
UBE3C-204ENST00000469336 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
UBE3C-204ENST00000469336 OATP04181 439 aa12.15□□□□□ -0.46
UBE3C-204ENST00000469336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
UBE3C-204ENST00000469336 RGS20O76081 388 aa12.13□□□□□ -0.47
UBE3C-204ENST00000469336 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
UBE3C-204ENST00000469336 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
UBE3C-204ENST00000469336 CFHP08603 1231 aa12.12□□□□□ -0.47
UBE3C-204ENST00000469336 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
UBE3C-204ENST00000469336 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
UBE3C-204ENST00000469336 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
UBE3C-204ENST00000469336 ZPR1O75312 459 aa12.08□□□□□ -0.48
UBE3C-204ENST00000469336 TLL1O43897 1013 aa12.07□□□□□ -0.48
UBE3C-204ENST00000469336 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
UBE3C-204ENST00000469336 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
UBE3C-204ENST00000469336 PRR14Q9BWN1 585 aa12.06□□□□□ -0.48
UBE3C-204ENST00000469336 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
UBE3C-204ENST00000469336 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
UBE3C-204ENST00000469336 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
UBE3C-204ENST00000469336 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
UBE3C-204ENST00000469336 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
UBE3C-204ENST00000469336 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
UBE3C-204ENST00000469336 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
UBE3C-204ENST00000469336 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
UBE3C-204ENST00000469336 MAP2K5Q13163 448 aa11.97□□□□□ -0.49
UBE3C-204ENST00000469336 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
UBE3C-204ENST00000469336 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
UBE3C-204ENST00000469336 IRF6O14896 467 aa11.95□□□□□ -0.5
UBE3C-204ENST00000469336 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
UBE3C-204ENST00000469336 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
UBE3C-204ENST00000469336 S1PR4O95977 384 aa11.94□□□□□ -0.5
UBE3C-204ENST00000469336 FUT2Q10981 343 aa11.94□□□□□ -0.5
UBE3C-204ENST00000469336 CCDC102AQ96A19 550 aa11.93□□□□□ -0.5
UBE3C-204ENST00000469336 NR1I2O75469 434 aa11.92□□□□□ -0.5
UBE3C-204ENST00000469336 GGCXP38435 758 aa11.92□□□□□ -0.5
UBE3C-204ENST00000469336 MDM2Q00987 491 aaPredicted RBP11.92□□□□□ -0.5
UBE3C-204ENST00000469336 ZMYND10O75800 440 aa11.91□□□□□ -0.5
UBE3C-204ENST00000469336 GCGRP47871 477 aa11.91□□□□□ -0.5
UBE3C-204ENST00000469336 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
UBE3C-204ENST00000469336 MINK1Q8N4C8 1332 aaPredicted RBP11.9□□□□□ -0.5
UBE3C-204ENST00000469336 MORN1Q5T089 497 aa11.9□□□□□ -0.5
UBE3C-204ENST00000469336 ADH1BP00325 375 aa11.89□□□□□ -0.51
UBE3C-204ENST00000469336 SULF1Q8IWU6 871 aa11.89□□□□□ -0.51
UBE3C-204ENST00000469336 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
UBE3C-204ENST00000469336 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
UBE3C-204ENST00000469336 GFRA3O60609 400 aa11.87□□□□□ -0.51
UBE3C-204ENST00000469336 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
UBE3C-204ENST00000469336 SLC27A5Q9Y2P5 690 aa11.87□□□□□ -0.51
UBE3C-204ENST00000469336 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
UBE3C-204ENST00000469336 Q6ZNB5 142 aa11.86□□□□□ -0.51
UBE3C-204ENST00000469336 SPSB2Q99619 263 aa11.86□□□□□ -0.51
UBE3C-204ENST00000469336 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
UBE3C-204ENST00000469336 CD46P15529 392 aa11.85□□□□□ -0.51
UBE3C-204ENST00000469336 SLC19A1P41440 591 aa11.83□□□□□ -0.52
UBE3C-204ENST00000469336 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
UBE3C-204ENST00000469336 THAP11Q96EK4 314 aa11.83□□□□□ -0.52
UBE3C-204ENST00000469336 LIAT1Q6ZQX7 453 aa11.82□□□□□ -0.52
UBE3C-204ENST00000469336 KRI1Q8N9T8 703 aaKnown RBP11.82□□□□□ -0.52
UBE3C-204ENST00000469336 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
UBE3C-204ENST00000469336 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
UBE3C-204ENST00000469336 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
UBE3C-204ENST00000469336 HLA-CQ95604 372 aa11.81□□□□□ -0.52
UBE3C-204ENST00000469336 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
UBE3C-204ENST00000469336 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
UBE3C-204ENST00000469336 PRDM9Q9NQV7 894 aa11.8□□□□□ -0.52
UBE3C-204ENST00000469336 LCE2BO14633 110 aa11.79□□□□□ -0.52
UBE3C-204ENST00000469336 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
UBE3C-204ENST00000469336 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
UBE3C-204ENST00000469336 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
UBE3C-204ENST00000469336 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
UBE3C-204ENST00000469336 KDM4AO75164 1064 aa11.76□□□□□ -0.53
UBE3C-204ENST00000469336 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
UBE3C-204ENST00000469336 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
UBE3C-204ENST00000469336 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
UBE3C-204ENST00000469336 CLCN1P35523 988 aa11.75□□□□□ -0.53
UBE3C-204ENST00000469336 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
UBE3C-204ENST00000469336 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
UBE3C-204ENST00000469336 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
UBE3C-204ENST00000469336 AK7Q96M32 723 aa11.74□□□□□ -0.53
UBE3C-204ENST00000469336 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
UBE3C-204ENST00000469336 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
UBE3C-204ENST00000469336 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
UBE3C-204ENST00000469336 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
UBE3C-204ENST00000469336 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
UBE3C-204ENST00000469336 HOXA2O43364 376 aa11.7□□□□□ -0.54
UBE3C-204ENST00000469336 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
UBE3C-204ENST00000469336 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
UBE3C-204ENST00000469336 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms