RNA–Protein interactions for RNA: ENST00000469330.5

TSPAN1-203, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 890 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-203ENST00000469330 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
TSPAN1-203ENST00000469330 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
TSPAN1-203ENST00000469330 KCNA6P17658 529 aa11.88□□□□□ -0.51
TSPAN1-203ENST00000469330 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
TSPAN1-203ENST00000469330 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-203ENST00000469330 BCANQ96GW7 911 aa11.87□□□□□ -0.51
TSPAN1-203ENST00000469330 RPRD2Q5VT52 1461 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-203ENST00000469330 NOS1P29475 1434 aa11.86□□□□□ -0.51
TSPAN1-203ENST00000469330 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
TSPAN1-203ENST00000469330 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-203ENST00000469330 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-203ENST00000469330 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
TSPAN1-203ENST00000469330 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
TSPAN1-203ENST00000469330 EFCAB6Q5THR3 1501 aa11.85□□□□□ -0.51
TSPAN1-203ENST00000469330 TET3O43151 1660 aa11.84□□□□□ -0.51
TSPAN1-203ENST00000469330 PROSER2Q86WR7 435 aaPredicted RBP11.84□□□□□ -0.51
TSPAN1-203ENST00000469330 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
TSPAN1-203ENST00000469330 LRP6O75581 1613 aa11.82□□□□□ -0.52
TSPAN1-203ENST00000469330 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-203ENST00000469330 SLC26A8Q96RN1 970 aa11.82□□□□□ -0.52
TSPAN1-203ENST00000469330 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
TSPAN1-203ENST00000469330 PHLPP1O60346 1717 aa11.82□□□□□ -0.52
TSPAN1-203ENST00000469330 COL16A1Q07092 1604 aaPredicted RBP11.8□□□□□ -0.52
TSPAN1-203ENST00000469330 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
TSPAN1-203ENST00000469330 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
TSPAN1-203ENST00000469330 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
TSPAN1-203ENST00000469330 NUP155O75694 1391 aa11.79□□□□□ -0.52
TSPAN1-203ENST00000469330 JCADQ9P266 1359 aa11.79□□□□□ -0.52
TSPAN1-203ENST00000469330 ITGAEP38570 1179 aa11.78□□□□□ -0.52
TSPAN1-203ENST00000469330 PLEKHG1Q9ULL1 1385 aa11.78□□□□□ -0.52
TSPAN1-203ENST00000469330 ADGRB3O60242 1522 aa11.77□□□□□ -0.52
TSPAN1-203ENST00000469330 TRIM52Q96A61 297 aa11.77□□□□□ -0.53
TSPAN1-203ENST00000469330 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.53
TSPAN1-203ENST00000469330 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
TSPAN1-203ENST00000469330 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
TSPAN1-203ENST00000469330 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
TSPAN1-203ENST00000469330 MSH6P52701 1360 aa11.76□□□□□ -0.53
TSPAN1-203ENST00000469330 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
TSPAN1-203ENST00000469330 PIK3R4Q99570 1358 aa11.75□□□□□ -0.53
TSPAN1-203ENST00000469330 GCC2Q8IWJ2 1684 aa11.75□□□□□ -0.53
TSPAN1-203ENST00000469330 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
TSPAN1-203ENST00000469330 UNC13BO14795 1591 aa11.73□□□□□ -0.53
TSPAN1-203ENST00000469330 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
TSPAN1-203ENST00000469330 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
TSPAN1-203ENST00000469330 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
TSPAN1-203ENST00000469330 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-203ENST00000469330 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
TSPAN1-203ENST00000469330 SHPRHQ149N8 1683 aa11.71□□□□□ -0.53
TSPAN1-203ENST00000469330 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.53
TSPAN1-203ENST00000469330 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.53
TSPAN1-203ENST00000469330 ATF3P18847 181 aa11.71□□□□□ -0.53
TSPAN1-203ENST00000469330 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
TSPAN1-203ENST00000469330 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.54
TSPAN1-203ENST00000469330 IQGAP3Q86VI3 1631 aa11.71□□□□□ -0.54
TSPAN1-203ENST00000469330 DIP2AQ14689 1571 aa11.71□□□□□ -0.54
TSPAN1-203ENST00000469330 ZNF772Q68DY9 489 aaPredicted RBP11.7□□□□□ -0.54
TSPAN1-203ENST00000469330 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
TSPAN1-203ENST00000469330 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
TSPAN1-203ENST00000469330 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
TSPAN1-203ENST00000469330 EP400Q96L91 3159 aa11.69□□□□□ -0.54
TSPAN1-203ENST00000469330 E9PCH4 1651 aa11.68□□□□□ -0.54
TSPAN1-203ENST00000469330 RXRBP28702 533 aa11.68□□□□□ -0.54
TSPAN1-203ENST00000469330 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
TSPAN1-203ENST00000469330 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
TSPAN1-203ENST00000469330 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
TSPAN1-203ENST00000469330 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
TSPAN1-203ENST00000469330 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
TSPAN1-203ENST00000469330 ADAMTS13Q76LX8 1427 aa11.67□□□□□ -0.54
TSPAN1-203ENST00000469330 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
TSPAN1-203ENST00000469330 AFF2P51816 1311 aa11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 HOXD11P31277 338 aaPredicted RBP11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 RGS12O14924 1447 aa11.65□□□□□ -0.54
TSPAN1-203ENST00000469330 TRPM2O94759 1503 aa11.65□□□□□ -0.55
TSPAN1-203ENST00000469330 CACNB1Q02641 598 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-203ENST00000469330 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
TSPAN1-203ENST00000469330 NAIPQ13075 1403 aa11.62□□□□□ -0.55
TSPAN1-203ENST00000469330 PTPRUQ92729 1446 aa11.62□□□□□ -0.55
TSPAN1-203ENST00000469330 DCCP43146 1447 aa11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 SPHKAPQ2M3C7 1700 aa11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 DDX17Q92841 729 aaKnown RBP11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
TSPAN1-203ENST00000469330 QTRT2Q9H974 415 aaKnown RBP11.59□□□□□ -0.55
TSPAN1-203ENST00000469330 SETBP1Q9Y6X0 1596 aa11.58□□□□□ -0.55
TSPAN1-203ENST00000469330 RBM6P78332 1123 aaKnown RBP11.58□□□□□ -0.56
TSPAN1-203ENST00000469330 C8orf37Q96NL8 207 aa11.58□□□□□ -0.56
TSPAN1-203ENST00000469330 MST1RQ04912 1400 aa11.58□□□□□ -0.56
TSPAN1-203ENST00000469330 METP08581 1390 aa11.57□□□□□ -0.56
TSPAN1-203ENST00000469330 KIF1BO60333 1816 aa11.57□□□□□ -0.56
TSPAN1-203ENST00000469330 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
TSPAN1-203ENST00000469330 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
TSPAN1-203ENST00000469330 XRN1Q8IZH2 1706 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms