RNA–Protein interactions for RNA: ENST00000469025.1

OPTN-209, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 642 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-209ENST00000469025 AMER1Q5JTC6 1135 aaPredicted RBP10.37□□□□□ -0.75
OPTN-209ENST00000469025 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
OPTN-209ENST00000469025 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
OPTN-209ENST00000469025 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
OPTN-209ENST00000469025 LRRC7Q96NW7 1537 aa10.36□□□□□ -0.75
OPTN-209ENST00000469025 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
OPTN-209ENST00000469025 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
OPTN-209ENST00000469025 TRIM52Q96A61 297 aa10.35□□□□□ -0.75
OPTN-209ENST00000469025 ERBB3P21860 1342 aa10.34□□□□□ -0.75
OPTN-209ENST00000469025 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
OPTN-209ENST00000469025 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
OPTN-209ENST00000469025 TRAPPC8Q9Y2L5 1435 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 RAPGEF6Q8TEU7 1601 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 TCOF1Q13428 1488 aaKnown RBP10.33□□□□□ -0.76
OPTN-209ENST00000469025 C3P01024 1663 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 ZMYM4Q5VZL5 1548 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 ZFYVE16Q7Z3T8 1539 aa10.33□□□□□ -0.76
OPTN-209ENST00000469025 GPHNQ9NQX3 736 aaPredicted RBP10.32□□□□□ -0.76
OPTN-209ENST00000469025 FOXK1P85037 733 aa10.31□□□□□ -0.76
OPTN-209ENST00000469025 SHANK2Q9UPX8 1470 aa10.3□□□□□ -0.76
OPTN-209ENST00000469025 ABCA9Q8IUA7 1624 aa10.3□□□□□ -0.76
OPTN-209ENST00000469025 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
OPTN-209ENST00000469025 FHOD3Q2V2M9 1422 aa10.3□□□□□ -0.76
OPTN-209ENST00000469025 RTN4Q9NQC3 1192 aaKnown RBP10.29□□□□□ -0.76
OPTN-209ENST00000469025 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
OPTN-209ENST00000469025 RAPGEF2Q9Y4G8 1499 aa10.29□□□□□ -0.76
OPTN-209ENST00000469025 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.76
OPTN-209ENST00000469025 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
OPTN-209ENST00000469025 KRTAP3-2Q9BYR7 98 aa10.28□□□□□ -0.76
OPTN-209ENST00000469025 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
OPTN-209ENST00000469025 RNF17Q9BXT8 1623 aaKnown RBP10.28□□□□□ -0.76
OPTN-209ENST00000469025 MAGI2Q86UL8 1455 aa10.28□□□□□ -0.76
OPTN-209ENST00000469025 DSG2Q14126 1118 aa10.27□□□□□ -0.77
OPTN-209ENST00000469025 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
OPTN-209ENST00000469025 DENND4BO75064 1496 aaPredicted RBP10.27□□□□□ -0.77
OPTN-209ENST00000469025 ZNF772Q68DY9 489 aaPredicted RBP10.26□□□□□ -0.77
OPTN-209ENST00000469025 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
OPTN-209ENST00000469025 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
OPTN-209ENST00000469025 NUDT7P0C024 238 aa10.24□□□□□ -0.77
OPTN-209ENST00000469025 RXRBP28702 533 aa10.24□□□□□ -0.77
OPTN-209ENST00000469025 SUPT6HQ7KZ85 1726 aaKnown RBP10.24□□□□□ -0.77
OPTN-209ENST00000469025 CEP350Q5VT06 3117 aa10.23□□□□□ -0.77
OPTN-209ENST00000469025 ZNF142P52746 1687 aaPredicted RBP10.23□□□□□ -0.77
OPTN-209ENST00000469025 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
OPTN-209ENST00000469025 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
OPTN-209ENST00000469025 ZNF687Q8N1G0 1237 aa10.22□□□□□ -0.77
OPTN-209ENST00000469025 BBXQ8WY36 941 aaPredicted RBP10.22□□□□□ -0.77
OPTN-209ENST00000469025 DISP1Q96F81 1524 aa10.22□□□□□ -0.77
OPTN-209ENST00000469025 NHSL1Q5SYE7 1610 aa10.22□□□□□ -0.77
OPTN-209ENST00000469025 PDE4AP27815 886 aa10.2□□□□□ -0.78
OPTN-209ENST00000469025 C1QTNF8P60827 252 aa10.2□□□□□ -0.78
OPTN-209ENST00000469025 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
OPTN-209ENST00000469025 VWDEQ8N2E2 1590 aa10.2□□□□□ -0.78
OPTN-209ENST00000469025 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
OPTN-209ENST00000469025 ATP10AO60312 1499 aa10.18□□□□□ -0.78
OPTN-209ENST00000469025 NPATQ14207 1427 aa10.18□□□□□ -0.78
OPTN-209ENST00000469025 LHX6Q9UPM6 363 aa10.18□□□□□ -0.78
OPTN-209ENST00000469025 FAM135BQ49AJ0 1406 aa10.17□□□□□ -0.78
OPTN-209ENST00000469025 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
OPTN-209ENST00000469025 HECW1Q76N89 1606 aa10.17□□□□□ -0.78
OPTN-209ENST00000469025 TBC1D12O60347 775 aa10.16□□□□□ -0.78
OPTN-209ENST00000469025 SYNMO15061 1565 aa10.16□□□□□ -0.78
OPTN-209ENST00000469025 RGS12O14924 1447 aa10.16□□□□□ -0.78
OPTN-209ENST00000469025 IQGAP2Q13576 1575 aa10.15□□□□□ -0.78
OPTN-209ENST00000469025 OXER1Q8TDS5 423 aa10.15□□□□□ -0.78
OPTN-209ENST00000469025 POLR1AO95602 1720 aaPredicted RBP10.15□□□□□ -0.78
OPTN-209ENST00000469025 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
OPTN-209ENST00000469025 MFSD10Q14728 455 aa10.14□□□□□ -0.79
OPTN-209ENST00000469025 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
OPTN-209ENST00000469025 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
OPTN-209ENST00000469025 NEURL4Q96JN8 1562 aa10.14□□□□□ -0.79
OPTN-209ENST00000469025 CEP170BQ9Y4F5 1589 aaPredicted RBP10.14□□□□□ -0.79
OPTN-209ENST00000469025 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
OPTN-209ENST00000469025 MYO3AQ8NEV4 1616 aa10.13□□□□□ -0.79
OPTN-209ENST00000469025 PBX2P40425 430 aa10.12□□□□□ -0.79
OPTN-209ENST00000469025 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
OPTN-209ENST00000469025 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
OPTN-209ENST00000469025 ABCA8O94911 1581 aa10.11□□□□□ -0.79
OPTN-209ENST00000469025 CFAP74Q9C0B2 1584 aa10.11□□□□□ -0.79
OPTN-209ENST00000469025 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.11□□□□□ -0.79
OPTN-209ENST00000469025 JCADQ9P266 1359 aa10.11□□□□□ -0.79
OPTN-209ENST00000469025 STRCP1A6NGW2 1772 aa10.11□□□□□ -0.79
OPTN-209ENST00000469025 LRP6O75581 1613 aa10.11□□□□□ -0.79
OPTN-209ENST00000469025 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
OPTN-209ENST00000469025 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
OPTN-209ENST00000469025 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
OPTN-209ENST00000469025 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
OPTN-209ENST00000469025 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
OPTN-209ENST00000469025 ZNF784Q8NCA9 323 aaPredicted RBP10.1□□□□□ -0.79
OPTN-209ENST00000469025 CNTLNQ9NXG0 1405 aa10.09□□□□□ -0.79
OPTN-209ENST00000469025 EP400Q96L91 3159 aa10.09□□□□□ -0.79
OPTN-209ENST00000469025 AGLP35573 1532 aa10.09□□□□□ -0.79
OPTN-209ENST00000469025 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
OPTN-209ENST00000469025 BIVM-ERCC5R4GMW8 1640 aa10.07□□□□□ -0.8
OPTN-209ENST00000469025 MROH2AA6NES4 1674 aa10.07□□□□□ -0.8
OPTN-209ENST00000469025 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
OPTN-209ENST00000469025 ROBO1Q9Y6N7 1651 aa10.06□□□□□ -0.8
OPTN-209ENST00000469025 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms