RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 USP47Q96K76 1375 aa21.13■□□□□ 0.97
CRAMP1-206ENST00000468839 CHGAP10645 457 aaKnown RBP21.12■□□□□ 0.97
CRAMP1-206ENST00000468839 NEXMIFQ5QGS0 1516 aa21.12■□□□□ 0.97
CRAMP1-206ENST00000468839 C3P01024 1663 aa21.12■□□□□ 0.97
CRAMP1-206ENST00000468839 KDM5AP29375 1690 aaKnown RBP21.11■□□□□ 0.97
CRAMP1-206ENST00000468839 IQGAP1P46940 1657 aa21.1■□□□□ 0.97
CRAMP1-206ENST00000468839 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
CRAMP1-206ENST00000468839 ZFYVE9O95405 1425 aa21.08■□□□□ 0.97
CRAMP1-206ENST00000468839 ADGRF5Q8IZF2 1346 aa21.07■□□□□ 0.96
CRAMP1-206ENST00000468839 SETBP1Q9Y6X0 1596 aa21.05■□□□□ 0.96
CRAMP1-206ENST00000468839 VGFO15240 615 aaPredicted RBP21.04■□□□□ 0.96
CRAMP1-206ENST00000468839 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
CRAMP1-206ENST00000468839 ADAMTSL3P82987 1691 aa21.03■□□□□ 0.96
CRAMP1-206ENST00000468839 TNRQ92752 1358 aa21.03■□□□□ 0.96
CRAMP1-206ENST00000468839 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
CRAMP1-206ENST00000468839 A2ML1A8K2U0 1454 aa21.02■□□□□ 0.96
CRAMP1-206ENST00000468839 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.96
CRAMP1-206ENST00000468839 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
CRAMP1-206ENST00000468839 CCDC7Q96M83 1385 aa21.01■□□□□ 0.95
CRAMP1-206ENST00000468839 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
CRAMP1-206ENST00000468839 C14orf93Q9H972 538 aaKnown RBP21■□□□□ 0.95
CRAMP1-206ENST00000468839 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
CRAMP1-206ENST00000468839 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
CRAMP1-206ENST00000468839 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
CRAMP1-206ENST00000468839 SCAF11Q99590 1463 aaKnown RBP20.99■□□□□ 0.95
CRAMP1-206ENST00000468839 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
CRAMP1-206ENST00000468839 NLRP1Q9C000 1473 aa20.98■□□□□ 0.95
CRAMP1-206ENST00000468839 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
CRAMP1-206ENST00000468839 KIF7Q2M1P5 1343 aa20.95■□□□□ 0.94
CRAMP1-206ENST00000468839 ADGRB1O14514 1584 aa20.94■□□□□ 0.94
CRAMP1-206ENST00000468839 MYO3AQ8NEV4 1616 aa20.94■□□□□ 0.94
CRAMP1-206ENST00000468839 MIER1Q8N108 512 aa20.94■□□□□ 0.94
CRAMP1-206ENST00000468839 CEBPAP49715 358 aaPredicted RBP20.93■□□□□ 0.94
CRAMP1-206ENST00000468839 RIMS2Q9UQ26 1411 aa20.93■□□□□ 0.94
CRAMP1-206ENST00000468839 TESK2Q96S53 571 aa20.91■□□□□ 0.94
CRAMP1-206ENST00000468839 EIF3AQ14152 1382 aaKnown RBP20.9■□□□□ 0.94
CRAMP1-206ENST00000468839 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
CRAMP1-206ENST00000468839 SETD1AO15047 1707 aaKnown RBP20.9■□□□□ 0.94
CRAMP1-206ENST00000468839 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.93
CRAMP1-206ENST00000468839 ALKQ9UM73 1620 aa20.89■□□□□ 0.93
CRAMP1-206ENST00000468839 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
CRAMP1-206ENST00000468839 SLC24A1O60721 1099 aa20.87■□□□□ 0.93
CRAMP1-206ENST00000468839 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
CRAMP1-206ENST00000468839 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
CRAMP1-206ENST00000468839 TMEM2Q9UHN6 1383 aa20.85■□□□□ 0.93
CRAMP1-206ENST00000468839 ASXL1Q8IXJ9 1541 aa20.84■□□□□ 0.93
CRAMP1-206ENST00000468839 TMF1P82094 1093 aa20.84■□□□□ 0.93
CRAMP1-206ENST00000468839 SBNO2Q9Y2G9 1366 aa20.83■□□□□ 0.92
CRAMP1-206ENST00000468839 SLIT1O75093 1534 aa20.83■□□□□ 0.92
CRAMP1-206ENST00000468839 QRICH2Q9H0J4 1663 aa20.83■□□□□ 0.92
CRAMP1-206ENST00000468839 ARHGAP23Q9P227 1491 aa20.82■□□□□ 0.92
CRAMP1-206ENST00000468839 TMEM132EQ6IEE7 984 aa20.82■□□□□ 0.92
CRAMP1-206ENST00000468839 ZNF142P52746 1687 aaPredicted RBP20.82■□□□□ 0.92
CRAMP1-206ENST00000468839 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
CRAMP1-206ENST00000468839 CEP170BQ9Y4F5 1589 aaPredicted RBP20.8■□□□□ 0.92
CRAMP1-206ENST00000468839 PTPRMP28827 1452 aa20.78■□□□□ 0.92
CRAMP1-206ENST00000468839 ANP32CO43423 234 aa20.78■□□□□ 0.92
CRAMP1-206ENST00000468839 THEMISQ8N1K5 641 aaPredicted RBP20.78■□□□□ 0.92
CRAMP1-206ENST00000468839 TRAK1Q9UPV9 953 aa20.78■□□□□ 0.92
CRAMP1-206ENST00000468839 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
CRAMP1-206ENST00000468839 CDCA8Q53HL2 280 aa20.77■□□□□ 0.92
CRAMP1-206ENST00000468839 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
CRAMP1-206ENST00000468839 YTHDC2Q9H6S0 1430 aaKnown RBP20.76■□□□□ 0.91
CRAMP1-206ENST00000468839 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
CRAMP1-206ENST00000468839 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
CRAMP1-206ENST00000468839 PLEKHG1Q9ULL1 1385 aa20.74■□□□□ 0.91
CRAMP1-206ENST00000468839 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
CRAMP1-206ENST00000468839 MYOM1P52179 1685 aa20.73■□□□□ 0.91
CRAMP1-206ENST00000468839 LTKP29376 864 aa20.72■□□□□ 0.91
CRAMP1-206ENST00000468839 TXNDC2Q86VQ3 553 aa20.72■□□□□ 0.91
CRAMP1-206ENST00000468839 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
CRAMP1-206ENST00000468839 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
CRAMP1-206ENST00000468839 MED14O60244 1454 aa20.7■□□□□ 0.9
CRAMP1-206ENST00000468839 CCER2I3L3R5 266 aa20.7■□□□□ 0.9
CRAMP1-206ENST00000468839 ABCC11Q96J66 1382 aa20.7■□□□□ 0.9
CRAMP1-206ENST00000468839 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
CRAMP1-206ENST00000468839 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
CRAMP1-206ENST00000468839 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
CRAMP1-206ENST00000468839 SIRT1Q96EB6 747 aa20.67■□□□□ 0.9
CRAMP1-206ENST00000468839 STK26Q9P289 416 aa20.66■□□□□ 0.9
CRAMP1-206ENST00000468839 TECPR2O15040 1411 aa20.65■□□□□ 0.9
CRAMP1-206ENST00000468839 METP08581 1390 aa20.65■□□□□ 0.9
CRAMP1-206ENST00000468839 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
CRAMP1-206ENST00000468839 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
CRAMP1-206ENST00000468839 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
CRAMP1-206ENST00000468839 CPS1P31327 1500 aa20.63■□□□□ 0.89
CRAMP1-206ENST00000468839 PER1O15534 1290 aaPredicted RBP20.63■□□□□ 0.89
CRAMP1-206ENST00000468839 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
CRAMP1-206ENST00000468839 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
CRAMP1-206ENST00000468839 BCANQ96GW7 911 aa20.62■□□□□ 0.89
CRAMP1-206ENST00000468839 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
CRAMP1-206ENST00000468839 PRAM1Q96QH2 718 aa20.61■□□□□ 0.89
CRAMP1-206ENST00000468839 POGKQ9P215 609 aa20.61■□□□□ 0.89
CRAMP1-206ENST00000468839 PANK3Q9H999 370 aa20.6■□□□□ 0.89
CRAMP1-206ENST00000468839 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
CRAMP1-206ENST00000468839 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
CRAMP1-206ENST00000468839 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
CRAMP1-206ENST00000468839 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
CRAMP1-206ENST00000468839 PTPRUQ92729 1446 aa20.54■□□□□ 0.88
CRAMP1-206ENST00000468839 XRN1Q8IZH2 1706 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms