RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 MIER1Q8N108 512 aa28.88■■■□□ 2.21
TMEM53-207ENST00000468117 ADGRF5Q8IZF2 1346 aa28.87■■■□□ 2.21
TMEM53-207ENST00000468117 C11orf95C9JLR9 678 aaPredicted RBP28.87■■■□□ 2.21
TMEM53-207ENST00000468117 TMEM131LA2VDJ0 1609 aa28.86■■■□□ 2.21
TMEM53-207ENST00000468117 KIAA1210Q9ULL0 1709 aa28.84■■■□□ 2.21
TMEM53-207ENST00000468117 RPGRIP1LQ68CZ1 1315 aa28.83■■■□□ 2.21
TMEM53-207ENST00000468117 NRXN1Q9ULB1 1477 aa28.82■■■□□ 2.2
TMEM53-207ENST00000468117 ST20-MTHFSA0A0A6YYL1 179 aa28.82■■■□□ 2.2
TMEM53-207ENST00000468117 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
TMEM53-207ENST00000468117 CCDC7Q96M83 1385 aa28.8■■■□□ 2.2
TMEM53-207ENST00000468117 FER1L4A9Z1Z3 1794 aa28.8■■■□□ 2.2
TMEM53-207ENST00000468117 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
TMEM53-207ENST00000468117 KIF7Q2M1P5 1343 aa28.77■■■□□ 2.2
TMEM53-207ENST00000468117 IQGAP1P46940 1657 aa28.77■■■□□ 2.2
TMEM53-207ENST00000468117 NUTM2DQ5VT03 806 aaPredicted RBP28.76■■■□□ 2.19
TMEM53-207ENST00000468117 PIK3C2GO75747 1445 aa28.75■■■□□ 2.19
TMEM53-207ENST00000468117 STAG3Q9UJ98 1225 aa28.74■■■□□ 2.19
TMEM53-207ENST00000468117 C3P01024 1663 aa28.72■■■□□ 2.19
TMEM53-207ENST00000468117 VGFO15240 615 aaPredicted RBP28.71■■■□□ 2.19
TMEM53-207ENST00000468117 TNRQ92752 1358 aa28.69■■■□□ 2.18
TMEM53-207ENST00000468117 SCAF11Q99590 1463 aaKnown RBP28.69■■■□□ 2.18
TMEM53-207ENST00000468117 CEBPAP49715 358 aaPredicted RBP28.69■■■□□ 2.18
TMEM53-207ENST00000468117 A2ML1A8K2U0 1454 aa28.68■■■□□ 2.18
TMEM53-207ENST00000468117 ZFYVE9O95405 1425 aa28.66■■■□□ 2.18
TMEM53-207ENST00000468117 POLR3GLQ9BT43 218 aa28.65■■■□□ 2.18
TMEM53-207ENST00000468117 C14orf93Q9H972 538 aaKnown RBP28.65■■■□□ 2.18
TMEM53-207ENST00000468117 SETBP1Q9Y6X0 1596 aa28.65■■■□□ 2.18
TMEM53-207ENST00000468117 TESK2Q96S53 571 aa28.64■■■□□ 2.17
TMEM53-207ENST00000468117 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
TMEM53-207ENST00000468117 ADGRB1O14514 1584 aa28.6■■■□□ 2.17
TMEM53-207ENST00000468117 SENP3Q9H4L4 574 aaPredicted RBP28.6■■■□□ 2.17
TMEM53-207ENST00000468117 UBR1Q8IWV7 1749 aa28.59■■■□□ 2.17
TMEM53-207ENST00000468117 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.17
TMEM53-207ENST00000468117 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.17
TMEM53-207ENST00000468117 EIF3AQ14152 1382 aaKnown RBP28.58■■■□□ 2.17
TMEM53-207ENST00000468117 RIMS2Q9UQ26 1411 aa28.57■■■□□ 2.16
TMEM53-207ENST00000468117 TMEM132EQ6IEE7 984 aa28.57■■■□□ 2.16
TMEM53-207ENST00000468117 DISP3Q9P2K9 1392 aa28.56■■■□□ 2.16
TMEM53-207ENST00000468117 ANP32CO43423 234 aa28.55■■■□□ 2.16
TMEM53-207ENST00000468117 NLRP1Q9C000 1473 aa28.54■■■□□ 2.16
TMEM53-207ENST00000468117 ADAMTSL3P82987 1691 aa28.54■■■□□ 2.16
TMEM53-207ENST00000468117 TMF1P82094 1093 aa28.52■■■□□ 2.16
TMEM53-207ENST00000468117 MYO3AQ8NEV4 1616 aa28.5■■■□□ 2.15
TMEM53-207ENST00000468117 TRAK1Q9UPV9 953 aa28.5■■■□□ 2.15
TMEM53-207ENST00000468117 ASXL1Q8IXJ9 1541 aa28.49■■■□□ 2.15
TMEM53-207ENST00000468117 ALKQ9UM73 1620 aa28.49■■■□□ 2.15
TMEM53-207ENST00000468117 ARHGEF28Q8N1W1 1705 aaKnown RBP28.45■■■□□ 2.15
TMEM53-207ENST00000468117 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.45■■■□□ 2.15
TMEM53-207ENST00000468117 TMEM2Q9UHN6 1383 aa28.45■■■□□ 2.14
TMEM53-207ENST00000468117 QRICH2Q9H0J4 1663 aa28.44■■■□□ 2.14
TMEM53-207ENST00000468117 CENPJQ9HC77 1338 aaPredicted RBP28.43■■■□□ 2.14
TMEM53-207ENST00000468117 SETD1AO15047 1707 aaKnown RBP28.43■■■□□ 2.14
TMEM53-207ENST00000468117 NRXN3Q9Y4C0 1643 aa28.42■■■□□ 2.14
TMEM53-207ENST00000468117 HDGFP51858 240 aaKnown RBP28.41■■■□□ 2.14
TMEM53-207ENST00000468117 PTPRMP28827 1452 aa28.39■■■□□ 2.14
TMEM53-207ENST00000468117 STK26Q9P289 416 aa28.38■■■□□ 2.13
TMEM53-207ENST00000468117 SBNO2Q9Y2G9 1366 aa28.38■■■□□ 2.13
TMEM53-207ENST00000468117 YTHDC1Q96MU7 727 aaKnown RBP28.37■■■□□ 2.13
TMEM53-207ENST00000468117 YTHDC2Q9H6S0 1430 aaKnown RBP28.37■■■□□ 2.13
TMEM53-207ENST00000468117 CDCA8Q53HL2 280 aa28.35■■■□□ 2.13
TMEM53-207ENST00000468117 SLC24A1O60721 1099 aa28.35■■■□□ 2.13
TMEM53-207ENST00000468117 LTKP29376 864 aa28.34■■■□□ 2.13
TMEM53-207ENST00000468117 CEP170BQ9Y4F5 1589 aaPredicted RBP28.33■■■□□ 2.13
TMEM53-207ENST00000468117 CCER2I3L3R5 266 aa28.33■■■□□ 2.13
TMEM53-207ENST00000468117 PRKRIP1Q9H875 184 aaPredicted RBP28.33■■■□□ 2.13
TMEM53-207ENST00000468117 SLIT1O75093 1534 aa28.33■■■□□ 2.13
TMEM53-207ENST00000468117 SETD1BQ9UPS6 1966 aaKnown RBP28.32■■■□□ 2.12
TMEM53-207ENST00000468117 ARHGAP23Q9P227 1491 aa28.31■■■□□ 2.12
TMEM53-207ENST00000468117 MYOM1P52179 1685 aa28.31■■■□□ 2.12
TMEM53-207ENST00000468117 TXNDC2Q86VQ3 553 aa28.31■■■□□ 2.12
TMEM53-207ENST00000468117 THEMISQ8N1K5 641 aaPredicted RBP28.31■■■□□ 2.12
TMEM53-207ENST00000468117 BCANQ96GW7 911 aa28.31■■■□□ 2.12
TMEM53-207ENST00000468117 CNGB1Q14028 1251 aaPredicted RBP28.29■■■□□ 2.12
TMEM53-207ENST00000468117 EID1Q9Y6B2 187 aa28.28■■■□□ 2.12
TMEM53-207ENST00000468117 SAFB2Q14151 953 aaKnown RBP eCLIP28.28■■■□□ 2.12
TMEM53-207ENST00000468117 METP08581 1390 aa28.28■■■□□ 2.12
TMEM53-207ENST00000468117 PANK3Q9H999 370 aa28.27■■■□□ 2.12
TMEM53-207ENST00000468117 PLEKHG1Q9ULL1 1385 aa28.27■■■□□ 2.12
TMEM53-207ENST00000468117 ZNF142P52746 1687 aaPredicted RBP28.26■■■□□ 2.11
TMEM53-207ENST00000468117 LRPPRCP42704 1394 aaKnown RBP28.25■■■□□ 2.11
TMEM53-207ENST00000468117 PRAM1Q96QH2 718 aa28.25■■■□□ 2.11
TMEM53-207ENST00000468117 ADAMTS13Q76LX8 1427 aa28.24■■■□□ 2.11
TMEM53-207ENST00000468117 PER1O15534 1290 aaPredicted RBP28.23■■■□□ 2.11
TMEM53-207ENST00000468117 TULP4Q9NRJ4 1543 aa28.22■■■□□ 2.11
TMEM53-207ENST00000468117 POGKQ9P215 609 aa28.22■■■□□ 2.11
TMEM53-207ENST00000468117 DLC1Q96QB1 1528 aa28.22■■■□□ 2.11
TMEM53-207ENST00000468117 ABCC11Q96J66 1382 aa28.2■■■□□ 2.1
TMEM53-207ENST00000468117 EVC2Q86UK5 1308 aa28.19■■■□□ 2.1
TMEM53-207ENST00000468117 KNDC1Q76NI1 1749 aa28.18■■■□□ 2.1
TMEM53-207ENST00000468117 MINK1Q8N4C8 1332 aaPredicted RBP28.17■■■□□ 2.1
TMEM53-207ENST00000468117 MED14O60244 1454 aa28.17■■■□□ 2.1
TMEM53-207ENST00000468117 SLC26A8Q96RN1 970 aa28.16■■■□□ 2.1
TMEM53-207ENST00000468117 WAPLQ7Z5K2 1190 aa28.16■■■□□ 2.1
TMEM53-207ENST00000468117 CCDC184Q52MB2 194 aa28.14■■■□□ 2.1
TMEM53-207ENST00000468117 PLEKHH1Q9ULM0 1364 aa28.14■■■□□ 2.1
TMEM53-207ENST00000468117 TECPR2O15040 1411 aa28.12■■■□□ 2.09
TMEM53-207ENST00000468117 CABP2Q9NPB3 220 aa28.11■■■□□ 2.09
TMEM53-207ENST00000468117 CPS1P31327 1500 aa28.11■■■□□ 2.09
TMEM53-207ENST00000468117 KTN1Q86UP2 1357 aaKnown RBP28.11■■■□□ 2.09
TMEM53-207ENST00000468117 TMC1Q8TDI8 760 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms