RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
CCDC66-211ENST00000468108 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
CCDC66-211ENST00000468108 PRR14Q9BWN1 585 aa11.16□□□□□ -0.62
CCDC66-211ENST00000468108 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.62
CCDC66-211ENST00000468108 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
CCDC66-211ENST00000468108 TLL1O43897 1013 aa11.13□□□□□ -0.63
CCDC66-211ENST00000468108 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
CCDC66-211ENST00000468108 E2F4Q16254 413 aa11.12□□□□□ -0.63
CCDC66-211ENST00000468108 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
CCDC66-211ENST00000468108 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
CCDC66-211ENST00000468108 ARIH1Q9Y4X5 557 aaPredicted RBP11.11□□□□□ -0.63
CCDC66-211ENST00000468108 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
CCDC66-211ENST00000468108 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
CCDC66-211ENST00000468108 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
CCDC66-211ENST00000468108 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
CCDC66-211ENST00000468108 GDF9O60383 454 aa11.09□□□□□ -0.63
CCDC66-211ENST00000468108 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
CCDC66-211ENST00000468108 EYA1Q99502 592 aa11.09□□□□□ -0.63
CCDC66-211ENST00000468108 S1PR4O95977 384 aa11.08□□□□□ -0.64
CCDC66-211ENST00000468108 ST8SIA5O15466 376 aa11.07□□□□□ -0.64
CCDC66-211ENST00000468108 AAASQ9NRG9 546 aa11.05□□□□□ -0.64
CCDC66-211ENST00000468108 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
CCDC66-211ENST00000468108 ADH1BP00325 375 aa11□□□□□ -0.65
CCDC66-211ENST00000468108 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
CCDC66-211ENST00000468108 DNAJB2P25686 324 aa10.99□□□□□ -0.65
CCDC66-211ENST00000468108 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
CCDC66-211ENST00000468108 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
CCDC66-211ENST00000468108 WDR70Q9NW82 654 aa10.97□□□□□ -0.65
CCDC66-211ENST00000468108 CFHP08603 1231 aa10.96□□□□□ -0.65
CCDC66-211ENST00000468108 SLC6A16Q9GZN6 736 aa10.96□□□□□ -0.65
CCDC66-211ENST00000468108 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
CCDC66-211ENST00000468108 WFS1O76024 890 aa10.95□□□□□ -0.66
CCDC66-211ENST00000468108 FOXC1Q12948 553 aa10.95□□□□□ -0.66
CCDC66-211ENST00000468108 PKD2L1Q9P0L9 805 aa10.95□□□□□ -0.66
CCDC66-211ENST00000468108 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
CCDC66-211ENST00000468108 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
CCDC66-211ENST00000468108 DACH1Q9UI36 760 aa10.94□□□□□ -0.66
CCDC66-211ENST00000468108 NR1I2O75469 434 aa10.93□□□□□ -0.66
CCDC66-211ENST00000468108 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
CCDC66-211ENST00000468108 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
CCDC66-211ENST00000468108 GMPR2Q9P2T1 348 aaKnown RBP10.9□□□□□ -0.66
CCDC66-211ENST00000468108 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
CCDC66-211ENST00000468108 AVPP01185 164 aa10.89□□□□□ -0.67
CCDC66-211ENST00000468108 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
CCDC66-211ENST00000468108 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
CCDC66-211ENST00000468108 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
CCDC66-211ENST00000468108 SLC10A3P09131 477 aa10.88□□□□□ -0.67
CCDC66-211ENST00000468108 AXIN1O15169 862 aa10.87□□□□□ -0.67
CCDC66-211ENST00000468108 NFX1Q12986 1120 aaKnown RBP10.87□□□□□ -0.67
CCDC66-211ENST00000468108 PTGDRQ13258 359 aa10.87□□□□□ -0.67
CCDC66-211ENST00000468108 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
CCDC66-211ENST00000468108 TOR4AQ9NXH8 423 aa10.86□□□□□ -0.67
CCDC66-211ENST00000468108 WIPF1O43516 503 aa10.85□□□□□ -0.67
CCDC66-211ENST00000468108 RPIAP49247 311 aa10.84□□□□□ -0.67
CCDC66-211ENST00000468108 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
CCDC66-211ENST00000468108 SPSB2Q99619 263 aa10.84□□□□□ -0.67
CCDC66-211ENST00000468108 INSM1Q01101 510 aaPredicted RBP10.83□□□□□ -0.68
CCDC66-211ENST00000468108 CTC1Q2NKJ3 1217 aa10.83□□□□□ -0.68
CCDC66-211ENST00000468108 CYP4X1Q8N118 509 aa10.83□□□□□ -0.68
CCDC66-211ENST00000468108 MLLT3P42568 568 aaPredicted RBP10.82□□□□□ -0.68
CCDC66-211ENST00000468108 PUS10Q3MIT2 529 aaKnown RBP10.82□□□□□ -0.68
CCDC66-211ENST00000468108 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
CCDC66-211ENST00000468108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.79□□□□□ -0.68
CCDC66-211ENST00000468108 CD2BP2O95400 341 aaKnown RBP10.79□□□□□ -0.68
CCDC66-211ENST00000468108 FCF1Q9Y324 198 aaKnown RBP10.79□□□□□ -0.68
CCDC66-211ENST00000468108 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
CCDC66-211ENST00000468108 LCE2CQ5TA81 110 aa10.75□□□□□ -0.69
CCDC66-211ENST00000468108 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
CCDC66-211ENST00000468108 TTC24A2A3L6 582 aaPredicted RBP10.73□□□□□ -0.69
CCDC66-211ENST00000468108 RSPH4AQ5TD94 716 aa10.73□□□□□ -0.69
CCDC66-211ENST00000468108 TERTO14746 1132 aaKnown RBP10.72□□□□□ -0.69
CCDC66-211ENST00000468108 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
CCDC66-211ENST00000468108 SNRPBP14678 240 aaKnown RBP10.71□□□□□ -0.69
CCDC66-211ENST00000468108 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
CCDC66-211ENST00000468108 CFAP44Q96MT7 982 aa10.71□□□□□ -0.69
CCDC66-211ENST00000468108 THAP11Q96EK4 314 aa10.7□□□□□ -0.7
CCDC66-211ENST00000468108 MORN1Q5T089 497 aa10.69□□□□□ -0.7
CCDC66-211ENST00000468108 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
CCDC66-211ENST00000468108 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
CCDC66-211ENST00000468108 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
CCDC66-211ENST00000468108 OATP04181 439 aa10.68□□□□□ -0.7
CCDC66-211ENST00000468108 SMPD1P17405 629 aa10.68□□□□□ -0.7
CCDC66-211ENST00000468108 TRIM47Q96LD4 638 aa10.68□□□□□ -0.7
CCDC66-211ENST00000468108 FCHSD2O94868 740 aa10.67□□□□□ -0.7
CCDC66-211ENST00000468108 FMNL1O95466 1100 aaPredicted RBP10.67□□□□□ -0.7
CCDC66-211ENST00000468108 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
CCDC66-211ENST00000468108 PRDM9Q9NQV7 894 aa10.67□□□□□ -0.7
CCDC66-211ENST00000468108 ZBTB24O43167 697 aaPredicted RBP10.66□□□□□ -0.7
CCDC66-211ENST00000468108 WNT7AO00755 349 aa10.65□□□□□ -0.7
CCDC66-211ENST00000468108 SNIP1Q8TAD8 396 aaKnown RBP10.65□□□□□ -0.7
CCDC66-211ENST00000468108 FUT2Q10981 343 aa10.64□□□□□ -0.71
CCDC66-211ENST00000468108 RDH13Q8NBN7 331 aa10.64□□□□□ -0.71
CCDC66-211ENST00000468108 ATP6V1AP38606 617 aa10.63□□□□□ -0.71
CCDC66-211ENST00000468108 METTL3Q86U44 580 aaKnown RBP10.63□□□□□ -0.71
CCDC66-211ENST00000468108 SLC27A5Q9Y2P5 690 aa10.63□□□□□ -0.71
CCDC66-211ENST00000468108 J3QL48 77 aa10.61□□□□□ -0.71
CCDC66-211ENST00000468108 KCNV2Q8TDN2 545 aa10.61□□□□□ -0.71
CCDC66-211ENST00000468108 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
CCDC66-211ENST00000468108 LOC100996750A0A140TA64 210 aa10.6□□□□□ -0.71
CCDC66-211ENST00000468108 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms