RNA–Protein interactions for RNA: ENST00000467786.1

FGD3-204, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 2

Gene FGD3, Length 4,697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-204ENST00000467786 MSH5O43196 834 aa15.5■□□□□ 0.07
FGD3-204ENST00000467786 GOLGA6L1Q8N7Z2 621 aa15.5■□□□□ 0.07
FGD3-204ENST00000467786 LNPKQ9C0E8 428 aa15.5■□□□□ 0.07
FGD3-204ENST00000467786 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
FGD3-204ENST00000467786 CHMP4CQ96CF2 233 aa15.5■□□□□ 0.07
FGD3-204ENST00000467786 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
FGD3-204ENST00000467786 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
FGD3-204ENST00000467786 TPM2P07951 284 aa15.49■□□□□ 0.07
FGD3-204ENST00000467786 BECN2A8MW95 431 aa15.49■□□□□ 0.07
FGD3-204ENST00000467786 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
FGD3-204ENST00000467786 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
FGD3-204ENST00000467786 HFM1A2PYH4 1435 aa15.48■□□□□ 0.07
FGD3-204ENST00000467786 SF3A1Q15459 793 aaKnown RBP15.48■□□□□ 0.07
FGD3-204ENST00000467786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.48■□□□□ 0.07
FGD3-204ENST00000467786 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
FGD3-204ENST00000467786 FOXD4L6Q3SYB3 417 aaPredicted RBP15.48■□□□□ 0.07
FGD3-204ENST00000467786 FOXD4L3Q6VB84 417 aaPredicted RBP15.48■□□□□ 0.07
FGD3-204ENST00000467786 DIAPH1O60610 1272 aaKnown RBP15.47■□□□□ 0.07
FGD3-204ENST00000467786 RIPK4P57078 832 aa15.47■□□□□ 0.07
FGD3-204ENST00000467786 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
FGD3-204ENST00000467786 ZNF644Q9H582 1327 aaPredicted RBP15.47■□□□□ 0.07
FGD3-204ENST00000467786 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
FGD3-204ENST00000467786 MLECQ14165 292 aa15.46■□□□□ 0.07
FGD3-204ENST00000467786 RUFY2Q8WXA3 655 aa15.46■□□□□ 0.07
FGD3-204ENST00000467786 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
FGD3-204ENST00000467786 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
FGD3-204ENST00000467786 CCDC184Q52MB2 194 aa15.46■□□□□ 0.07
FGD3-204ENST00000467786 H3BQV1 296 aa15.46■□□□□ 0.06
FGD3-204ENST00000467786 IFFO2Q5TF58 517 aa15.46■□□□□ 0.06
FGD3-204ENST00000467786 CDC45O75419 566 aa15.45■□□□□ 0.06
FGD3-204ENST00000467786 CCDC39Q9UFE4 941 aa15.45■□□□□ 0.06
FGD3-204ENST00000467786 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
FGD3-204ENST00000467786 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
FGD3-204ENST00000467786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.06
FGD3-204ENST00000467786 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
FGD3-204ENST00000467786 ZNF771Q7L3S4 317 aaPredicted RBP15.44■□□□□ 0.06
FGD3-204ENST00000467786 FAM184AQ8NB25 1140 aa15.44■□□□□ 0.06
FGD3-204ENST00000467786 DIAPH3Q9NSV4 1193 aa15.44■□□□□ 0.06
FGD3-204ENST00000467786 ZKSCAN1P17029 563 aaPredicted RBP15.44■□□□□ 0.06
FGD3-204ENST00000467786 NINLQ9Y2I6 1382 aa15.43■□□□□ 0.06
FGD3-204ENST00000467786 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
FGD3-204ENST00000467786 MBD3O95983 291 aa15.43■□□□□ 0.06
FGD3-204ENST00000467786 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
FGD3-204ENST00000467786 AMPHP49418 695 aa15.43■□□□□ 0.06
FGD3-204ENST00000467786 ANO2Q9NQ90 1003 aa15.43■□□□□ 0.06
FGD3-204ENST00000467786 GNAI1P63096 354 aa15.43■□□□□ 0.06
FGD3-204ENST00000467786 CCDC173Q0VFZ6 552 aa15.43■□□□□ 0.06
FGD3-204ENST00000467786 NUTM2DQ5VT03 806 aaPredicted RBP15.43■□□□□ 0.06
FGD3-204ENST00000467786 TPM3P06753 285 aa15.42■□□□□ 0.06
FGD3-204ENST00000467786 COG3Q96JB2 828 aa15.42■□□□□ 0.06
FGD3-204ENST00000467786 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
FGD3-204ENST00000467786 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
FGD3-204ENST00000467786 TULP1O00294 542 aaPredicted RBP15.41■□□□□ 0.06
FGD3-204ENST00000467786 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
FGD3-204ENST00000467786 GPS2Q13227 327 aa15.4■□□□□ 0.06
FGD3-204ENST00000467786 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
FGD3-204ENST00000467786 ZNF592Q92610 1267 aa15.39■□□□□ 0.05
FGD3-204ENST00000467786 PTPRGP23470 1445 aa15.39■□□□□ 0.05
FGD3-204ENST00000467786 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
FGD3-204ENST00000467786 RABEP1Q15276 862 aa15.38■□□□□ 0.05
FGD3-204ENST00000467786 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
FGD3-204ENST00000467786 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
FGD3-204ENST00000467786 CFTRP13569 1480 aa15.38■□□□□ 0.05
FGD3-204ENST00000467786 NGDNQ8NEJ9 315 aaKnown RBP15.38■□□□□ 0.05
FGD3-204ENST00000467786 HMGN5P82970 282 aaKnown RBP15.37■□□□□ 0.05
FGD3-204ENST00000467786 CAVIN1Q6NZI2 390 aaKnown RBP15.37■□□□□ 0.05
FGD3-204ENST00000467786 MCM4P33991 863 aa15.37■□□□□ 0.05
FGD3-204ENST00000467786 NPHP1O15259 732 aa15.37■□□□□ 0.05
FGD3-204ENST00000467786 MCM2P49736 904 aa15.37■□□□□ 0.05
FGD3-204ENST00000467786 GRPEL1Q9HAV7 217 aa15.37■□□□□ 0.05
FGD3-204ENST00000467786 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
FGD3-204ENST00000467786 BICD2Q8TD16 824 aa15.37■□□□□ 0.05
FGD3-204ENST00000467786 EFCAB5A4FU69 1503 aa15.36■□□□□ 0.05
FGD3-204ENST00000467786 BCAR3O75815 825 aa15.36■□□□□ 0.05
FGD3-204ENST00000467786 RNF20Q5VTR2 975 aa15.36■□□□□ 0.05
FGD3-204ENST00000467786 TEX35Q5T0J7 233 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 RAD54L2Q9Y4B4 1467 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 MTHFSP49914 203 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 TAF7LQ5H9L4 462 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 GCC1Q96CN9 775 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 VPS37CA5D8V6 355 aaPredicted RBP15.35■□□□□ 0.05
FGD3-204ENST00000467786 ESPNB1AK53 854 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 MINK1Q8N4C8 1332 aaPredicted RBP15.35■□□□□ 0.05
FGD3-204ENST00000467786 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
FGD3-204ENST00000467786 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
FGD3-204ENST00000467786 NOC3LQ8WTT2 800 aaKnown RBP15.35■□□□□ 0.05
FGD3-204ENST00000467786 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
FGD3-204ENST00000467786 LETM1O95202 739 aaPredicted RBP15.34■□□□□ 0.05
FGD3-204ENST00000467786 RRP9O43818 475 aaKnown RBP15.34■□□□□ 0.05
FGD3-204ENST00000467786 IFT57Q9NWB7 429 aa15.34■□□□□ 0.05
FGD3-204ENST00000467786 HSP90AB4PQ58FF6 505 aa15.33■□□□□ 0.05
FGD3-204ENST00000467786 CPLX2Q6PUV4 134 aaKnown RBP15.33■□□□□ 0.04
FGD3-204ENST00000467786 TPM1P09493 284 aa15.33■□□□□ 0.04
FGD3-204ENST00000467786 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
FGD3-204ENST00000467786 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
FGD3-204ENST00000467786 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.04
FGD3-204ENST00000467786 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
FGD3-204ENST00000467786 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
FGD3-204ENST00000467786 NBPF1Q3BBV0 1214 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms