RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 TESK2Q96S53 571 aa12.42□□□□□ -0.42
TMEM254-209ENST00000467529 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
TMEM254-209ENST00000467529 PPLO60437 1756 aa12.42□□□□□ -0.42
TMEM254-209ENST00000467529 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
TMEM254-209ENST00000467529 PREX1Q8TCU6 1659 aa12.41□□□□□ -0.42
TMEM254-209ENST00000467529 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
TMEM254-209ENST00000467529 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
TMEM254-209ENST00000467529 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
TMEM254-209ENST00000467529 RPGRIP1LQ68CZ1 1315 aa12.39□□□□□ -0.43
TMEM254-209ENST00000467529 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
TMEM254-209ENST00000467529 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
TMEM254-209ENST00000467529 IDI1Q13907 227 aa12.38□□□□□ -0.43
TMEM254-209ENST00000467529 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
TMEM254-209ENST00000467529 TMF1P82094 1093 aa12.37□□□□□ -0.43
TMEM254-209ENST00000467529 MYT1Q01538 1121 aa12.37□□□□□ -0.43
TMEM254-209ENST00000467529 MLECQ14165 292 aa12.36□□□□□ -0.43
TMEM254-209ENST00000467529 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
TMEM254-209ENST00000467529 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
TMEM254-209ENST00000467529 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
TMEM254-209ENST00000467529 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
TMEM254-209ENST00000467529 NEXMIFQ5QGS0 1516 aa12.36□□□□□ -0.43
TMEM254-209ENST00000467529 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
TMEM254-209ENST00000467529 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
TMEM254-209ENST00000467529 EIF3AQ14152 1382 aaKnown RBP12.35□□□□□ -0.43
TMEM254-209ENST00000467529 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
TMEM254-209ENST00000467529 MYO5BQ9ULV0 1848 aa12.35□□□□□ -0.43
TMEM254-209ENST00000467529 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
TMEM254-209ENST00000467529 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
TMEM254-209ENST00000467529 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
TMEM254-209ENST00000467529 CNGB1Q14028 1251 aaPredicted RBP12.32□□□□□ -0.44
TMEM254-209ENST00000467529 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
TMEM254-209ENST00000467529 SPATA31D1Q6ZQQ2 1576 aa12.32□□□□□ -0.44
TMEM254-209ENST00000467529 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
TMEM254-209ENST00000467529 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
TMEM254-209ENST00000467529 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
TMEM254-209ENST00000467529 MYO3AQ8NEV4 1616 aa12.31□□□□□ -0.44
TMEM254-209ENST00000467529 PER1O15534 1290 aaPredicted RBP12.3□□□□□ -0.44
TMEM254-209ENST00000467529 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
TMEM254-209ENST00000467529 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
TMEM254-209ENST00000467529 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
TMEM254-209ENST00000467529 PANK3Q9H999 370 aa12.29□□□□□ -0.44
TMEM254-209ENST00000467529 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
TMEM254-209ENST00000467529 ZMYM3Q14202 1370 aa12.28□□□□□ -0.44
TMEM254-209ENST00000467529 TRAK1Q9UPV9 953 aa12.28□□□□□ -0.44
TMEM254-209ENST00000467529 KTN1Q86UP2 1357 aaKnown RBP12.28□□□□□ -0.44
TMEM254-209ENST00000467529 KDM5AP29375 1690 aaKnown RBP12.28□□□□□ -0.44
TMEM254-209ENST00000467529 RALBP1Q15311 655 aa12.27□□□□□ -0.44
TMEM254-209ENST00000467529 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
TMEM254-209ENST00000467529 CENPJQ9HC77 1338 aaPredicted RBP12.26□□□□□ -0.45
TMEM254-209ENST00000467529 MYOM1P52179 1685 aa12.26□□□□□ -0.45
TMEM254-209ENST00000467529 SBNO2Q9Y2G9 1366 aa12.26□□□□□ -0.45
TMEM254-209ENST00000467529 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
TMEM254-209ENST00000467529 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
TMEM254-209ENST00000467529 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
TMEM254-209ENST00000467529 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
TMEM254-209ENST00000467529 QRICH2Q9H0J4 1663 aa12.25□□□□□ -0.45
TMEM254-209ENST00000467529 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
TMEM254-209ENST00000467529 PARD3Q8TEW0 1356 aa12.25□□□□□ -0.45
TMEM254-209ENST00000467529 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
TMEM254-209ENST00000467529 ARHGEF28Q8N1W1 1705 aaKnown RBP12.24□□□□□ -0.45
TMEM254-209ENST00000467529 SENP3Q9H4L4 574 aaPredicted RBP12.23□□□□□ -0.45
TMEM254-209ENST00000467529 CC2D1BQ5T0F9 858 aaKnown RBP12.22□□□□□ -0.45
TMEM254-209ENST00000467529 AEBP2Q6ZN18 517 aaPredicted RBP12.22□□□□□ -0.45
TMEM254-209ENST00000467529 BRD4O60885 1362 aaPredicted RBP12.22□□□□□ -0.45
TMEM254-209ENST00000467529 ALKQ9UM73 1620 aa12.22□□□□□ -0.45
TMEM254-209ENST00000467529 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
TMEM254-209ENST00000467529 TMC1Q8TDI8 760 aa12.21□□□□□ -0.45
TMEM254-209ENST00000467529 TNRQ92752 1358 aa12.21□□□□□ -0.45
TMEM254-209ENST00000467529 PNISRQ8TF01 805 aaKnown RBP12.2□□□□□ -0.46
TMEM254-209ENST00000467529 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
TMEM254-209ENST00000467529 NLRP13Q86W25 1043 aa12.19□□□□□ -0.46
TMEM254-209ENST00000467529 STK26Q9P289 416 aa12.19□□□□□ -0.46
TMEM254-209ENST00000467529 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
TMEM254-209ENST00000467529 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
TMEM254-209ENST00000467529 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
TMEM254-209ENST00000467529 PTPRMP28827 1452 aa12.17□□□□□ -0.46
TMEM254-209ENST00000467529 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
TMEM254-209ENST00000467529 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
TMEM254-209ENST00000467529 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
TMEM254-209ENST00000467529 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
TMEM254-209ENST00000467529 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
TMEM254-209ENST00000467529 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
TMEM254-209ENST00000467529 C3P01024 1663 aa12.16□□□□□ -0.46
TMEM254-209ENST00000467529 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
TMEM254-209ENST00000467529 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
TMEM254-209ENST00000467529 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
TMEM254-209ENST00000467529 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
TMEM254-209ENST00000467529 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.46
TMEM254-209ENST00000467529 SAFB2Q14151 953 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM254-209ENST00000467529 PUS7Q96PZ0 661 aaKnown RBP12.15□□□□□ -0.46
TMEM254-209ENST00000467529 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
TMEM254-209ENST00000467529 NLRP1Q9C000 1473 aa12.14□□□□□ -0.47
TMEM254-209ENST00000467529 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
TMEM254-209ENST00000467529 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
TMEM254-209ENST00000467529 TMEM2Q9UHN6 1383 aa12.13□□□□□ -0.47
TMEM254-209ENST00000467529 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
TMEM254-209ENST00000467529 POGKQ9P215 609 aa12.13□□□□□ -0.47
TMEM254-209ENST00000467529 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
TMEM254-209ENST00000467529 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
TMEM254-209ENST00000467529 DLC1Q96QB1 1528 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms