RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.28
PRPF3-203ENST00000467514 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
PRPF3-203ENST00000467514 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
PRPF3-203ENST00000467514 IDI1Q13907 227 aa16.75■□□□□ 0.27
PRPF3-203ENST00000467514 TET3O43151 1660 aa16.75■□□□□ 0.27
PRPF3-203ENST00000467514 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
PRPF3-203ENST00000467514 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
PRPF3-203ENST00000467514 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRPF3-203ENST00000467514 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.27
PRPF3-203ENST00000467514 LRP6O75581 1613 aa16.7■□□□□ 0.26
PRPF3-203ENST00000467514 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
PRPF3-203ENST00000467514 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
PRPF3-203ENST00000467514 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
PRPF3-203ENST00000467514 MYO5BQ9ULV0 1848 aa16.69■□□□□ 0.26
PRPF3-203ENST00000467514 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-203ENST00000467514 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-203ENST00000467514 ATF3P18847 181 aa16.69■□□□□ 0.26
PRPF3-203ENST00000467514 RXRBP28702 533 aa16.69■□□□□ 0.26
PRPF3-203ENST00000467514 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-203ENST00000467514 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
PRPF3-203ENST00000467514 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
PRPF3-203ENST00000467514 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
PRPF3-203ENST00000467514 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
PRPF3-203ENST00000467514 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
PRPF3-203ENST00000467514 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
PRPF3-203ENST00000467514 ABCC5O15440 1437 aa16.68■□□□□ 0.26
PRPF3-203ENST00000467514 CHGAP10645 457 aaKnown RBP16.67■□□□□ 0.26
PRPF3-203ENST00000467514 DAPK1P53355 1430 aa16.67■□□□□ 0.26
PRPF3-203ENST00000467514 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
PRPF3-203ENST00000467514 PLEKHG1Q9ULL1 1385 aa16.66■□□□□ 0.26
PRPF3-203ENST00000467514 CADPS2Q86UW7 1296 aa16.66■□□□□ 0.26
PRPF3-203ENST00000467514 NOS1P29475 1434 aa16.65■□□□□ 0.26
PRPF3-203ENST00000467514 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
PRPF3-203ENST00000467514 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.65■□□□□ 0.26
PRPF3-203ENST00000467514 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
PRPF3-203ENST00000467514 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
PRPF3-203ENST00000467514 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRPF3-203ENST00000467514 AFF2P51816 1311 aa16.61■□□□□ 0.25
PRPF3-203ENST00000467514 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
PRPF3-203ENST00000467514 NUTM2DQ5VT03 806 aaPredicted RBP16.6■□□□□ 0.25
PRPF3-203ENST00000467514 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
PRPF3-203ENST00000467514 RPRD2Q5VT52 1461 aaKnown RBP16.6■□□□□ 0.25
PRPF3-203ENST00000467514 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
PRPF3-203ENST00000467514 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
PRPF3-203ENST00000467514 TBX22Q9Y458 520 aa16.58■□□□□ 0.24
PRPF3-203ENST00000467514 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.24
PRPF3-203ENST00000467514 C8orf37Q96NL8 207 aa16.57■□□□□ 0.24
PRPF3-203ENST00000467514 TRPM2O94759 1503 aa16.56■□□□□ 0.24
PRPF3-203ENST00000467514 BRINP3Q76B58 766 aa16.55■□□□□ 0.24
PRPF3-203ENST00000467514 FOXD1Q16676 465 aa16.54■□□□□ 0.24
PRPF3-203ENST00000467514 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
PRPF3-203ENST00000467514 PIK3R4Q99570 1358 aa16.53■□□□□ 0.24
PRPF3-203ENST00000467514 RGS12O14924 1447 aa16.53■□□□□ 0.24
PRPF3-203ENST00000467514 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
PRPF3-203ENST00000467514 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
PRPF3-203ENST00000467514 FAM50AQ14320 339 aaKnown RBP16.52■□□□□ 0.24
PRPF3-203ENST00000467514 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.24
PRPF3-203ENST00000467514 AMOTL2Q9Y2J4 779 aa16.52■□□□□ 0.24
PRPF3-203ENST00000467514 ADAMTS13Q76LX8 1427 aa16.52■□□□□ 0.23
PRPF3-203ENST00000467514 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
PRPF3-203ENST00000467514 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
PRPF3-203ENST00000467514 DCCP43146 1447 aa16.5■□□□□ 0.23
PRPF3-203ENST00000467514 ADGRL2O95490 1459 aa16.49■□□□□ 0.23
PRPF3-203ENST00000467514 NGLY1Q96IV0 654 aa16.49■□□□□ 0.23
PRPF3-203ENST00000467514 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
PRPF3-203ENST00000467514 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
PRPF3-203ENST00000467514 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
PRPF3-203ENST00000467514 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
PRPF3-203ENST00000467514 E9PCH4 1651 aa16.47■□□□□ 0.23
PRPF3-203ENST00000467514 UNC13BO14795 1591 aa16.47■□□□□ 0.23
PRPF3-203ENST00000467514 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
PRPF3-203ENST00000467514 MST1RQ04912 1400 aa16.45■□□□□ 0.22
PRPF3-203ENST00000467514 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
PRPF3-203ENST00000467514 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
PRPF3-203ENST00000467514 PNPLA6Q8IY17 1366 aa16.44■□□□□ 0.22
PRPF3-203ENST00000467514 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
PRPF3-203ENST00000467514 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
PRPF3-203ENST00000467514 USP21Q9UK80 565 aa16.42■□□□□ 0.22
PRPF3-203ENST00000467514 NALCNQ8IZF0 1738 aa16.4■□□□□ 0.22
PRPF3-203ENST00000467514 ADGRL3Q9HAR2 1447 aa16.39■□□□□ 0.21
PRPF3-203ENST00000467514 IQGAP3Q86VI3 1631 aa16.39■□□□□ 0.21
PRPF3-203ENST00000467514 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
PRPF3-203ENST00000467514 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
PRPF3-203ENST00000467514 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
PRPF3-203ENST00000467514 NUP155O75694 1391 aa16.36■□□□□ 0.21
PRPF3-203ENST00000467514 SPHKAPQ2M3C7 1700 aa16.35■□□□□ 0.21
PRPF3-203ENST00000467514 METP08581 1390 aa16.34■□□□□ 0.21
PRPF3-203ENST00000467514 C1orf167Q5SNV9 1468 aa16.34■□□□□ 0.21
PRPF3-203ENST00000467514 PTCH1Q13635 1447 aa16.33■□□□□ 0.2
PRPF3-203ENST00000467514 EP400Q96L91 3159 aa16.33■□□□□ 0.2
PRPF3-203ENST00000467514 HRCP23327 699 aa16.32■□□□□ 0.2
PRPF3-203ENST00000467514 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
PRPF3-203ENST00000467514 ITGAEP38570 1179 aa16.3■□□□□ 0.2
PRPF3-203ENST00000467514 ATRNO75882 1429 aa16.29■□□□□ 0.2
PRPF3-203ENST00000467514 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
PRPF3-203ENST00000467514 SF3B2Q13435 895 aaKnown RBP16.28■□□□□ 0.2
PRPF3-203ENST00000467514 KIF1BO60333 1816 aa16.28■□□□□ 0.2
PRPF3-203ENST00000467514 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
PRPF3-203ENST00000467514 LAMC1P11047 1609 aa16.27■□□□□ 0.2
PRPF3-203ENST00000467514 SOS2Q07890 1332 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms