RNA–Protein interactions for RNA: ENST00000467307.1

USP30-204, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 3

Gene USP30, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-204ENST00000467307 PKD2Q13563 968 aa8.84□□□□□ -0.99
USP30-204ENST00000467307 CARD11Q9BXL7 1154 aa8.84□□□□□ -0.99
USP30-204ENST00000467307 SSUH2Q9Y2M2 353 aa8.84□□□□□ -0.99
USP30-204ENST00000467307 RNF17Q9BXT8 1623 aaKnown RBP8.83□□□□□ -1
USP30-204ENST00000467307 KIAA1210Q9ULL0 1709 aa8.83□□□□□ -1
USP30-204ENST00000467307 PRG4Q92954 1404 aaPredicted RBP8.83□□□□□ -1
USP30-204ENST00000467307 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.83□□□□□ -1
USP30-204ENST00000467307 ZNF692Q9BU19 519 aaPredicted RBP8.83□□□□□ -1
USP30-204ENST00000467307 PLSCR2Q9NRY7 297 aa8.83□□□□□ -1
USP30-204ENST00000467307 ZBTB47Q9UFB7 747 aaPredicted RBP8.83□□□□□ -1
USP30-204ENST00000467307 RTEL1-TNFRSF6BF6WH68 1400 aa8.82□□□□□ -1
USP30-204ENST00000467307 RRP1P56182 461 aaKnown RBP8.82□□□□□ -1
USP30-204ENST00000467307 ATP10BO94823 1461 aa8.82□□□□□ -1
USP30-204ENST00000467307 JPH4Q96JJ6 628 aa8.81□□□□□ -1
USP30-204ENST00000467307 PLB1Q6P1J6 1458 aa8.81□□□□□ -1
USP30-204ENST00000467307 SYNMO15061 1565 aa8.81□□□□□ -1
USP30-204ENST00000467307 PIK3C2GO75747 1445 aa8.8□□□□□ -1
USP30-204ENST00000467307 CHMP7Q8WUX9 453 aaPredicted RBP8.8□□□□□ -1
USP30-204ENST00000467307 RCAN3Q9UKA8 241 aa8.8□□□□□ -1
USP30-204ENST00000467307 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
USP30-204ENST00000467307 TMF1P82094 1093 aa8.79□□□□□ -1
USP30-204ENST00000467307 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
USP30-204ENST00000467307 UHRF1BP1LA0JNW5 1464 aa8.77□□□□□ -1
USP30-204ENST00000467307 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
USP30-204ENST00000467307 SBNO2Q9Y2G9 1366 aa8.77□□□□□ -1.01
USP30-204ENST00000467307 PER1O15534 1290 aaPredicted RBP8.77□□□□□ -1.01
USP30-204ENST00000467307 SAMD9LQ8IVG5 1584 aa8.77□□□□□ -1.01
USP30-204ENST00000467307 MYO5CQ9NQX4 1742 aa8.77□□□□□ -1.01
USP30-204ENST00000467307 CDC42BPBQ9Y5S2 1711 aa8.77□□□□□ -1.01
USP30-204ENST00000467307 ABCC2Q92887 1545 aa8.76□□□□□ -1.01
USP30-204ENST00000467307 CCDC184Q52MB2 194 aa8.76□□□□□ -1.01
USP30-204ENST00000467307 CENPQQ7L2Z9 268 aaPredicted RBP8.76□□□□□ -1.01
USP30-204ENST00000467307 BACH2Q9BYV9 841 aa8.76□□□□□ -1.01
USP30-204ENST00000467307 TRPM2O94759 1503 aa8.75□□□□□ -1.01
USP30-204ENST00000467307 ST20-MTHFSA0A0A6YYL1 179 aa8.75□□□□□ -1.01
USP30-204ENST00000467307 A2MP01023 1474 aa8.75□□□□□ -1.01
USP30-204ENST00000467307 ZNF644Q9H582 1327 aaPredicted RBP8.75□□□□□ -1.01
USP30-204ENST00000467307 TTC37Q6PGP7 1564 aa8.74□□□□□ -1.01
USP30-204ENST00000467307 PTPRTO14522 1441 aa8.74□□□□□ -1.01
USP30-204ENST00000467307 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
USP30-204ENST00000467307 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
USP30-204ENST00000467307 PUS7Q96PZ0 661 aaKnown RBP8.74□□□□□ -1.01
USP30-204ENST00000467307 IQGAP1P46940 1657 aa8.74□□□□□ -1.01
USP30-204ENST00000467307 DEPDC5O75140 1603 aa8.73□□□□□ -1.01
USP30-204ENST00000467307 MYOM2P54296 1465 aa8.73□□□□□ -1.01
USP30-204ENST00000467307 SCAF11Q99590 1463 aaKnown RBP8.73□□□□□ -1.01
USP30-204ENST00000467307 CD44P16070 742 aaKnown RBP8.73□□□□□ -1.01
USP30-204ENST00000467307 SPHKAPQ2M3C7 1700 aa8.73□□□□□ -1.01
USP30-204ENST00000467307 CEP152O94986 1710 aa8.72□□□□□ -1.01
USP30-204ENST00000467307 ASXL1Q8IXJ9 1541 aa8.72□□□□□ -1.01
USP30-204ENST00000467307 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
USP30-204ENST00000467307 PLCH2O75038 1416 aa8.71□□□□□ -1.01
USP30-204ENST00000467307 PDE4AP27815 886 aa8.71□□□□□ -1.02
USP30-204ENST00000467307 TESK2Q96S53 571 aa8.71□□□□□ -1.02
USP30-204ENST00000467307 TET3O43151 1660 aa8.71□□□□□ -1.02
USP30-204ENST00000467307 PLA2R1Q13018 1463 aa8.7□□□□□ -1.02
USP30-204ENST00000467307 ARHGAP5Q13017 1502 aa8.7□□□□□ -1.02
USP30-204ENST00000467307 MADDQ8WXG6 1647 aa8.7□□□□□ -1.02
USP30-204ENST00000467307 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
USP30-204ENST00000467307 ZNF521Q96K83 1311 aa8.7□□□□□ -1.02
USP30-204ENST00000467307 ABCC1P33527 1531 aa8.7□□□□□ -1.02
USP30-204ENST00000467307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP30-204ENST00000467307 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
USP30-204ENST00000467307 VWDEQ8N2E2 1590 aa8.69□□□□□ -1.02
USP30-204ENST00000467307 SETBP1Q9Y6X0 1596 aa8.69□□□□□ -1.02
USP30-204ENST00000467307 MYO3AQ8NEV4 1616 aa8.69□□□□□ -1.02
USP30-204ENST00000467307 IRX6P78412 446 aaPredicted RBP8.69□□□□□ -1.02
USP30-204ENST00000467307 CGNL1Q0VF96 1302 aa8.69□□□□□ -1.02
USP30-204ENST00000467307 MAPK8IP3Q9UPT6 1336 aa8.69□□□□□ -1.02
USP30-204ENST00000467307 CT47B1P0C2W7 299 aaPredicted RBP8.68□□□□□ -1.02
USP30-204ENST00000467307 PDE3AQ14432 1141 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 KNSTRNQ9Y448 316 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 KANK1Q14678 1352 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 LMTK2Q8IWU2 1503 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 USP32Q8NFA0 1604 aa8.68□□□□□ -1.02
USP30-204ENST00000467307 KDM5AP29375 1690 aaKnown RBP8.68□□□□□ -1.02
USP30-204ENST00000467307 E9PSI1 815 aa8.67□□□□□ -1.02
USP30-204ENST00000467307 NKTRP30414 1462 aaKnown RBP8.67□□□□□ -1.02
USP30-204ENST00000467307 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
USP30-204ENST00000467307 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
USP30-204ENST00000467307 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
USP30-204ENST00000467307 EFCAB2Q5VUJ9 269 aa8.67□□□□□ -1.02
USP30-204ENST00000467307 VIRMAQ69YN4 1812 aaKnown RBP8.67□□□□□ -1.02
USP30-204ENST00000467307 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
USP30-204ENST00000467307 DAXXQ9UER7 740 aaPredicted RBP8.67□□□□□ -1.02
USP30-204ENST00000467307 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
USP30-204ENST00000467307 FANCAO15360 1455 aa8.66□□□□□ -1.02
USP30-204ENST00000467307 POLR3AO14802 1390 aaPredicted RBP8.66□□□□□ -1.02
USP30-204ENST00000467307 NSD2O96028 1365 aa8.66□□□□□ -1.02
USP30-204ENST00000467307 ZNF777Q9ULD5 760 aaPredicted RBP8.66□□□□□ -1.02
USP30-204ENST00000467307 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
USP30-204ENST00000467307 NRXN1Q9ULB1 1477 aa8.64□□□□□ -1.03
USP30-204ENST00000467307 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
USP30-204ENST00000467307 BECN1Q14457 450 aa8.63□□□□□ -1.03
USP30-204ENST00000467307 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
USP30-204ENST00000467307 ZNF326Q5BKZ1 582 aaKnown RBP8.63□□□□□ -1.03
USP30-204ENST00000467307 AMER1Q5JTC6 1135 aaPredicted RBP8.63□□□□□ -1.03
USP30-204ENST00000467307 DUSP27Q5VZP5 1158 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms