RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 NEURL4Q96JN8 1562 aa15.47■□□□□ 0.07
HPS1-208ENST00000467246 LRPPRCP42704 1394 aaKnown RBP15.46■□□□□ 0.07
HPS1-208ENST00000467246 WASHC2CQ9Y4E1 1318 aa15.46■□□□□ 0.07
HPS1-208ENST00000467246 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
HPS1-208ENST00000467246 KIF1BO60333 1816 aa15.45■□□□□ 0.06
HPS1-208ENST00000467246 MYOM2P54296 1465 aa15.44■□□□□ 0.06
HPS1-208ENST00000467246 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
HPS1-208ENST00000467246 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
HPS1-208ENST00000467246 MROH2AA6NES4 1674 aa15.44■□□□□ 0.06
HPS1-208ENST00000467246 ABCC3O15438 1527 aa15.42■□□□□ 0.06
HPS1-208ENST00000467246 NOS1P29475 1434 aa15.41■□□□□ 0.06
HPS1-208ENST00000467246 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
HPS1-208ENST00000467246 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
HPS1-208ENST00000467246 EIF3AQ14152 1382 aaKnown RBP15.41■□□□□ 0.06
HPS1-208ENST00000467246 CDCA8Q53HL2 280 aa15.41■□□□□ 0.06
HPS1-208ENST00000467246 ADGRB3O60242 1522 aa15.4■□□□□ 0.06
HPS1-208ENST00000467246 DIP2CQ9Y2E4 1556 aa15.4■□□□□ 0.06
HPS1-208ENST00000467246 YEATS2Q9ULM3 1422 aa15.4■□□□□ 0.06
HPS1-208ENST00000467246 IFT172Q9UG01 1749 aa15.4■□□□□ 0.06
HPS1-208ENST00000467246 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
HPS1-208ENST00000467246 NRXN1Q9ULB1 1477 aa15.39■□□□□ 0.05
HPS1-208ENST00000467246 KNSTRNQ9Y448 316 aa15.39■□□□□ 0.05
HPS1-208ENST00000467246 RICTORQ6R327 1708 aa15.38■□□□□ 0.05
HPS1-208ENST00000467246 FAM69CQ0P6D2 419 aa15.37■□□□□ 0.05
HPS1-208ENST00000467246 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
HPS1-208ENST00000467246 SALL2Q9Y467 1007 aaPredicted RBP15.36■□□□□ 0.05
HPS1-208ENST00000467246 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
HPS1-208ENST00000467246 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
HPS1-208ENST00000467246 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
HPS1-208ENST00000467246 ERICH6BQ5W0A0 696 aa15.36■□□□□ 0.05
HPS1-208ENST00000467246 CAMSAP1Q5T5Y3 1602 aa15.35■□□□□ 0.05
HPS1-208ENST00000467246 SIGLEC1Q9BZZ2 1709 aa15.35■□□□□ 0.05
HPS1-208ENST00000467246 NUTM2DQ5VT03 806 aaPredicted RBP15.35■□□□□ 0.05
HPS1-208ENST00000467246 SYNMO15061 1565 aa15.34■□□□□ 0.05
HPS1-208ENST00000467246 GLI2P10070 1586 aa15.34■□□□□ 0.05
HPS1-208ENST00000467246 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
HPS1-208ENST00000467246 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
HPS1-208ENST00000467246 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
HPS1-208ENST00000467246 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
HPS1-208ENST00000467246 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
HPS1-208ENST00000467246 PPP4R2Q9NY27 417 aa15.33■□□□□ 0.04
HPS1-208ENST00000467246 MYOM1P52179 1685 aa15.33■□□□□ 0.04
HPS1-208ENST00000467246 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
HPS1-208ENST00000467246 PPP2R1AP30153 589 aa15.32■□□□□ 0.04
HPS1-208ENST00000467246 PPLO60437 1756 aa15.32■□□□□ 0.04
HPS1-208ENST00000467246 IDI1Q13907 227 aa15.31■□□□□ 0.04
HPS1-208ENST00000467246 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
HPS1-208ENST00000467246 CENPJQ9HC77 1338 aaPredicted RBP15.31■□□□□ 0.04
HPS1-208ENST00000467246 KDM5AP29375 1690 aaKnown RBP15.3■□□□□ 0.04
HPS1-208ENST00000467246 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
HPS1-208ENST00000467246 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
HPS1-208ENST00000467246 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
HPS1-208ENST00000467246 SETBP1Q9Y6X0 1596 aa15.29■□□□□ 0.04
HPS1-208ENST00000467246 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
HPS1-208ENST00000467246 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
HPS1-208ENST00000467246 CARD14Q9BXL6 1004 aa15.29■□□□□ 0.04
HPS1-208ENST00000467246 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
HPS1-208ENST00000467246 PIK3C2BO00750 1634 aa15.29■□□□□ 0.04
HPS1-208ENST00000467246 ADGRB1O14514 1584 aa15.28■□□□□ 0.04
HPS1-208ENST00000467246 SBNO2Q9Y2G9 1366 aa15.28■□□□□ 0.04
HPS1-208ENST00000467246 VGFO15240 615 aaPredicted RBP15.27■□□□□ 0.04
HPS1-208ENST00000467246 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
HPS1-208ENST00000467246 BLMP54132 1417 aaPredicted RBP15.27■□□□□ 0.04
HPS1-208ENST00000467246 MYO3AQ8NEV4 1616 aa15.27■□□□□ 0.04
HPS1-208ENST00000467246 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.03
HPS1-208ENST00000467246 TSPOAP1O95153 1857 aa15.26■□□□□ 0.03
HPS1-208ENST00000467246 NPC1L1Q9UHC9 1359 aa15.26■□□□□ 0.03
HPS1-208ENST00000467246 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
HPS1-208ENST00000467246 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
HPS1-208ENST00000467246 SLC52A1Q9NWF4 448 aa15.25■□□□□ 0.03
HPS1-208ENST00000467246 INSRP06213 1382 aa15.25■□□□□ 0.03
HPS1-208ENST00000467246 ZC3H13Q5T200 1668 aaKnown RBP15.25■□□□□ 0.03
HPS1-208ENST00000467246 ZMYM4Q5VZL5 1548 aa15.25■□□□□ 0.03
HPS1-208ENST00000467246 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
HPS1-208ENST00000467246 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
HPS1-208ENST00000467246 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
HPS1-208ENST00000467246 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
HPS1-208ENST00000467246 QRICH2Q9H0J4 1663 aa15.21■□□□□ 0.03
HPS1-208ENST00000467246 RCAN3Q9UKA8 241 aa15.21■□□□□ 0.03
HPS1-208ENST00000467246 PREX1Q8TCU6 1659 aa15.21■□□□□ 0.02
HPS1-208ENST00000467246 SAFB2Q14151 953 aaKnown RBP eCLIP15.19■□□□□ 0.02
HPS1-208ENST00000467246 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
HPS1-208ENST00000467246 STK26Q9P289 416 aa15.19■□□□□ 0.02
HPS1-208ENST00000467246 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
HPS1-208ENST00000467246 MYO5BQ9ULV0 1848 aa15.18■□□□□ 0.02
HPS1-208ENST00000467246 TMEM131LA2VDJ0 1609 aa15.18■□□□□ 0.02
HPS1-208ENST00000467246 MLECQ14165 292 aa15.18■□□□□ 0.02
HPS1-208ENST00000467246 NSD3Q9BZ95 1437 aa15.17■□□□□ 0.02
HPS1-208ENST00000467246 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
HPS1-208ENST00000467246 MSH5O43196 834 aa15.17■□□□□ 0.02
HPS1-208ENST00000467246 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
HPS1-208ENST00000467246 EVC2Q86UK5 1308 aa15.16■□□□□ 0.02
HPS1-208ENST00000467246 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
HPS1-208ENST00000467246 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
HPS1-208ENST00000467246 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
HPS1-208ENST00000467246 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
HPS1-208ENST00000467246 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
HPS1-208ENST00000467246 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
HPS1-208ENST00000467246 AGLP35573 1532 aa15.14■□□□□ 0.01
HPS1-208ENST00000467246 MORC1Q86VD1 984 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms