RNA–Protein interactions for RNA: ENST00000467095.5

SYN3-208, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-208ENST00000467095 TRIM26Q12899 539 aaPredicted RBP10.54□□□□□ -0.72
SYN3-208ENST00000467095 UBR1Q8IWV7 1749 aa10.53□□□□□ -0.72
SYN3-208ENST00000467095 NPATQ14207 1427 aa10.53□□□□□ -0.72
SYN3-208ENST00000467095 CNTLNQ9NXG0 1405 aa10.53□□□□□ -0.72
SYN3-208ENST00000467095 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
SYN3-208ENST00000467095 STRCQ7RTU9 1775 aa10.52□□□□□ -0.72
SYN3-208ENST00000467095 KIF1BO60333 1816 aa10.51□□□□□ -0.73
SYN3-208ENST00000467095 ARHGAP31Q2M1Z3 1444 aa10.51□□□□□ -0.73
SYN3-208ENST00000467095 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
SYN3-208ENST00000467095 FBXO31Q5XUX0 539 aaPredicted RBP10.51□□□□□ -0.73
SYN3-208ENST00000467095 WASHC2CQ9Y4E1 1318 aa10.51□□□□□ -0.73
SYN3-208ENST00000467095 UGGT1Q9NYU2 1555 aa10.51□□□□□ -0.73
SYN3-208ENST00000467095 CLTCL1P53675 1640 aa10.51□□□□□ -0.73
SYN3-208ENST00000467095 NUP155O75694 1391 aa10.5□□□□□ -0.73
SYN3-208ENST00000467095 NOS1P29475 1434 aa10.5□□□□□ -0.73
SYN3-208ENST00000467095 KDM5AP29375 1690 aaKnown RBP10.49□□□□□ -0.73
SYN3-208ENST00000467095 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
SYN3-208ENST00000467095 LMTK3Q96Q04 1460 aa10.49□□□□□ -0.73
SYN3-208ENST00000467095 TMEM131LA2VDJ0 1609 aa10.48□□□□□ -0.73
SYN3-208ENST00000467095 POLR1AO95602 1720 aaPredicted RBP10.48□□□□□ -0.73
SYN3-208ENST00000467095 IFT172Q9UG01 1749 aa10.48□□□□□ -0.73
SYN3-208ENST00000467095 RPRD2Q5VT52 1461 aaKnown RBP10.48□□□□□ -0.73
SYN3-208ENST00000467095 CEP170BQ9Y4F5 1589 aaPredicted RBP10.48□□□□□ -0.73
SYN3-208ENST00000467095 KANK1Q14678 1352 aa10.47□□□□□ -0.73
SYN3-208ENST00000467095 PTPRTO14522 1441 aa10.46□□□□□ -0.74
SYN3-208ENST00000467095 TRPM2O94759 1503 aa10.45□□□□□ -0.74
SYN3-208ENST00000467095 HRCP23327 699 aa10.45□□□□□ -0.74
SYN3-208ENST00000467095 PPLO60437 1756 aa10.44□□□□□ -0.74
SYN3-208ENST00000467095 MPHOSPH9Q99550 1183 aa10.44□□□□□ -0.74
SYN3-208ENST00000467095 PCGF6Q9BYE7 350 aa10.44□□□□□ -0.74
SYN3-208ENST00000467095 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
SYN3-208ENST00000467095 TNRQ92752 1358 aa10.42□□□□□ -0.74
SYN3-208ENST00000467095 GABBR2O75899 941 aa10.42□□□□□ -0.74
SYN3-208ENST00000467095 PKD2Q13563 968 aa10.42□□□□□ -0.74
SYN3-208ENST00000467095 ESF1Q9H501 851 aaKnown RBP10.42□□□□□ -0.74
SYN3-208ENST00000467095 ADGRB3O60242 1522 aa10.42□□□□□ -0.74
SYN3-208ENST00000467095 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
SYN3-208ENST00000467095 NEURL4Q96JN8 1562 aa10.41□□□□□ -0.74
SYN3-208ENST00000467095 SETD1AO15047 1707 aaKnown RBP10.4□□□□□ -0.74
SYN3-208ENST00000467095 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
SYN3-208ENST00000467095 UHRF1BP1Q6BDS2 1440 aa10.4□□□□□ -0.75
SYN3-208ENST00000467095 DHX57Q6P158 1386 aaKnown RBP10.39□□□□□ -0.75
SYN3-208ENST00000467095 STRCP1A6NGW2 1772 aa10.39□□□□□ -0.75
SYN3-208ENST00000467095 IDI1Q13907 227 aa10.39□□□□□ -0.75
SYN3-208ENST00000467095 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
SYN3-208ENST00000467095 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
SYN3-208ENST00000467095 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
SYN3-208ENST00000467095 SLIT1O75093 1534 aa10.38□□□□□ -0.75
SYN3-208ENST00000467095 NEXMIFQ5QGS0 1516 aa10.38□□□□□ -0.75
SYN3-208ENST00000467095 IQGAP1P46940 1657 aa10.38□□□□□ -0.75
SYN3-208ENST00000467095 ARHGAP23Q9P227 1491 aa10.37□□□□□ -0.75
SYN3-208ENST00000467095 HSPA2P54652 639 aa10.37□□□□□ -0.75
SYN3-208ENST00000467095 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
SYN3-208ENST00000467095 ZFYVE9O95405 1425 aa10.35□□□□□ -0.75
SYN3-208ENST00000467095 SPATA31E1Q6ZUB1 1445 aa10.35□□□□□ -0.75
SYN3-208ENST00000467095 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
SYN3-208ENST00000467095 XIRP1Q702N8 1843 aaKnown RBP10.35□□□□□ -0.75
SYN3-208ENST00000467095 CHD2O14647 1828 aaKnown RBP10.34□□□□□ -0.75
SYN3-208ENST00000467095 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
SYN3-208ENST00000467095 SLC52A1Q9NWF4 448 aa10.32□□□□□ -0.76
SYN3-208ENST00000467095 LTKP29376 864 aa10.31□□□□□ -0.76
SYN3-208ENST00000467095 MED14O60244 1454 aa10.3□□□□□ -0.76
SYN3-208ENST00000467095 TMEM2Q9UHN6 1383 aa10.3□□□□□ -0.76
SYN3-208ENST00000467095 SIN3AQ96ST3 1273 aa10.3□□□□□ -0.76
SYN3-208ENST00000467095 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
SYN3-208ENST00000467095 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
SYN3-208ENST00000467095 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
SYN3-208ENST00000467095 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
SYN3-208ENST00000467095 RIMS2Q9UQ26 1411 aa10.29□□□□□ -0.76
SYN3-208ENST00000467095 SETBP1Q9Y6X0 1596 aa10.28□□□□□ -0.76
SYN3-208ENST00000467095 SCAF11Q99590 1463 aaKnown RBP10.28□□□□□ -0.76
SYN3-208ENST00000467095 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
SYN3-208ENST00000467095 NRXN1Q9ULB1 1477 aa10.26□□□□□ -0.77
SYN3-208ENST00000467095 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
SYN3-208ENST00000467095 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
SYN3-208ENST00000467095 KIAA1210Q9ULL0 1709 aa10.26□□□□□ -0.77
SYN3-208ENST00000467095 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
SYN3-208ENST00000467095 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
SYN3-208ENST00000467095 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
SYN3-208ENST00000467095 ADAMTS13Q76LX8 1427 aa10.25□□□□□ -0.77
SYN3-208ENST00000467095 LTBP4Q8N2S1 1624 aa10.25□□□□□ -0.77
SYN3-208ENST00000467095 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
SYN3-208ENST00000467095 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
SYN3-208ENST00000467095 RGL3Q3MIN7 710 aa10.24□□□□□ -0.77
SYN3-208ENST00000467095 MYOM2P54296 1465 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 NWD1Q149M9 1564 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 LAMC1P11047 1609 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 KNDC1Q76NI1 1749 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 ADGRF5Q8IZF2 1346 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 PLEKHG1Q9ULL1 1385 aa10.23□□□□□ -0.77
SYN3-208ENST00000467095 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
SYN3-208ENST00000467095 ANKLE2Q86XL3 938 aa10.22□□□□□ -0.77
SYN3-208ENST00000467095 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
SYN3-208ENST00000467095 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
SYN3-208ENST00000467095 PTPRUQ92729 1446 aa10.21□□□□□ -0.78
SYN3-208ENST00000467095 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.78
SYN3-208ENST00000467095 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
SYN3-208ENST00000467095 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
SYN3-208ENST00000467095 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms