RNA–Protein interactions for RNA: ENST00000466910.5

SRRM1-206, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 799 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-206ENST00000466910 IQGAP3Q86VI3 1631 aa29.27■■■□□ 2.28
SRRM1-206ENST00000466910 RIMS2Q9UQ26 1411 aa29.27■■■□□ 2.28
SRRM1-206ENST00000466910 PROSER2Q86WR7 435 aaPredicted RBP29.26■■■□□ 2.27
SRRM1-206ENST00000466910 ALKQ9UM73 1620 aa29.26■■■□□ 2.27
SRRM1-206ENST00000466910 ZFYVE9O95405 1425 aa29.25■■■□□ 2.27
SRRM1-206ENST00000466910 RRBP1Q9P2E9 1410 aaKnown RBP29.25■■■□□ 2.27
SRRM1-206ENST00000466910 PLEKHG1Q9ULL1 1385 aa29.25■■■□□ 2.27
SRRM1-206ENST00000466910 SENP3Q9H4L4 574 aaPredicted RBP29.24■■■□□ 2.27
SRRM1-206ENST00000466910 E9PCH4 1651 aa29.24■■■□□ 2.27
SRRM1-206ENST00000466910 TMEM94Q12767 1356 aa29.23■■■□□ 2.27
SRRM1-206ENST00000466910 TMEM131LA2VDJ0 1609 aa29.22■■■□□ 2.27
SRRM1-206ENST00000466910 NUTM2DQ5VT03 806 aaPredicted RBP29.17■■■□□ 2.26
SRRM1-206ENST00000466910 TBX22Q9Y458 520 aa29.17■■■□□ 2.26
SRRM1-206ENST00000466910 RBM33Q96EV2 1170 aaKnown RBP29.16■■■□□ 2.26
SRRM1-206ENST00000466910 NKTRP30414 1462 aaKnown RBP29.16■■■□□ 2.26
SRRM1-206ENST00000466910 SOCS7O14512 581 aa29.15■■■□□ 2.26
SRRM1-206ENST00000466910 MYO5BQ9ULV0 1848 aa29.14■■■□□ 2.26
SRRM1-206ENST00000466910 NWD1Q149M9 1564 aa29.11■■■□□ 2.25
SRRM1-206ENST00000466910 MSH6P52701 1360 aa29.11■■■□□ 2.25
SRRM1-206ENST00000466910 NAIPQ13075 1403 aa29.11■■■□□ 2.25
SRRM1-206ENST00000466910 XIRP1Q702N8 1843 aaKnown RBP29.1■■■□□ 2.25
SRRM1-206ENST00000466910 FAM135BQ49AJ0 1406 aa29.1■■■□□ 2.25
SRRM1-206ENST00000466910 MED1Q15648 1581 aaPredicted RBP29.09■■■□□ 2.25
SRRM1-206ENST00000466910 ZNF326Q5BKZ1 582 aaKnown RBP29.08■■■□□ 2.25
SRRM1-206ENST00000466910 TRIM52Q96A61 297 aa29.07■■■□□ 2.24
SRRM1-206ENST00000466910 PHF23Q9BUL5 403 aaPredicted RBP29.07■■■□□ 2.24
SRRM1-206ENST00000466910 ADAMTS13Q76LX8 1427 aa29.05■■■□□ 2.24
SRRM1-206ENST00000466910 PIK3R4Q99570 1358 aa29.04■■■□□ 2.24
SRRM1-206ENST00000466910 C14orf37Q86TY3 774 aa29.03■■■□□ 2.24
SRRM1-206ENST00000466910 DIP2AQ14689 1571 aa29.02■■■□□ 2.24
SRRM1-206ENST00000466910 HFM1A2PYH4 1435 aa29.02■■■□□ 2.24
SRRM1-206ENST00000466910 SPHKAPQ2M3C7 1700 aa29.01■■■□□ 2.23
SRRM1-206ENST00000466910 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
SRRM1-206ENST00000466910 NCOA3Q9Y6Q9 1424 aa29.01■■■□□ 2.23
SRRM1-206ENST00000466910 CHD2O14647 1828 aaKnown RBP29■■■□□ 2.23
SRRM1-206ENST00000466910 SLC4A1APQ9BWU0 796 aaKnown RBP28.97■■■□□ 2.23
SRRM1-206ENST00000466910 AMOTL2Q9Y2J4 779 aa28.97■■■□□ 2.23
SRRM1-206ENST00000466910 TRPM2O94759 1503 aa28.95■■■□□ 2.23
SRRM1-206ENST00000466910 C19orf44Q9H6X5 657 aa28.94■■■□□ 2.22
SRRM1-206ENST00000466910 CADPS2Q86UW7 1296 aa28.93■■■□□ 2.22
SRRM1-206ENST00000466910 ATF3P18847 181 aa28.92■■■□□ 2.22
SRRM1-206ENST00000466910 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
SRRM1-206ENST00000466910 CLTCL1P53675 1640 aa28.89■■■□□ 2.22
SRRM1-206ENST00000466910 SETBP1Q9Y6X0 1596 aa28.88■■■□□ 2.21
SRRM1-206ENST00000466910 PTPRUQ92729 1446 aa28.87■■■□□ 2.21
SRRM1-206ENST00000466910 VGFO15240 615 aaPredicted RBP28.85■■■□□ 2.21
SRRM1-206ENST00000466910 METP08581 1390 aa28.83■■■□□ 2.21
SRRM1-206ENST00000466910 NEXMIFQ5QGS0 1516 aa28.82■■■□□ 2.2
SRRM1-206ENST00000466910 NRXN3Q9Y4C0 1643 aa28.81■■■□□ 2.2
SRRM1-206ENST00000466910 RPGRIP1LQ68CZ1 1315 aa28.81■■■□□ 2.2
SRRM1-206ENST00000466910 KIF1BO60333 1816 aa28.8■■■□□ 2.2
SRRM1-206ENST00000466910 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
SRRM1-206ENST00000466910 JCADQ9P266 1359 aa28.77■■■□□ 2.2
SRRM1-206ENST00000466910 FOXD1Q16676 465 aa28.77■■■□□ 2.2
SRRM1-206ENST00000466910 DCCP43146 1447 aa28.76■■■□□ 2.19
SRRM1-206ENST00000466910 PHLPP1O60346 1717 aa28.74■■■□□ 2.19
SRRM1-206ENST00000466910 ACIN1Q9UKV3 1341 aaKnown RBP28.74■■■□□ 2.19
SRRM1-206ENST00000466910 MPHOSPH9Q99550 1183 aa28.74■■■□□ 2.19
SRRM1-206ENST00000466910 RGS17Q9UGC6 210 aaPredicted RBP28.74■■■□□ 2.19
SRRM1-206ENST00000466910 XRN1Q8IZH2 1706 aaKnown RBP28.74■■■□□ 2.19
SRRM1-206ENST00000466910 CCDC144AA2RUR9 1427 aa28.71■■■□□ 2.19
SRRM1-206ENST00000466910 BRINP3Q76B58 766 aa28.71■■■□□ 2.19
SRRM1-206ENST00000466910 RGL3Q3MIN7 710 aa28.66■■■□□ 2.18
SRRM1-206ENST00000466910 ADGRL3Q9HAR2 1447 aa28.66■■■□□ 2.18
SRRM1-206ENST00000466910 SPATA31A6Q5VVP1 1343 aa28.66■■■□□ 2.18
SRRM1-206ENST00000466910 COL16A1Q07092 1604 aaPredicted RBP28.65■■■□□ 2.18
SRRM1-206ENST00000466910 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
SRRM1-206ENST00000466910 MST1RQ04912 1400 aa28.63■■■□□ 2.17
SRRM1-206ENST00000466910 PTCH1Q13635 1447 aa28.62■■■□□ 2.17
SRRM1-206ENST00000466910 SETD5Q9C0A6 1442 aa28.62■■■□□ 2.17
SRRM1-206ENST00000466910 MEX3CQ5U5Q3 659 aaKnown RBP28.6■■■□□ 2.17
SRRM1-206ENST00000466910 POTEAQ6S8J7 498 aa28.6■■■□□ 2.17
SRRM1-206ENST00000466910 ANKRD30BQ9BXX2 1392 aa28.59■■■□□ 2.17
SRRM1-206ENST00000466910 ROBO2Q9HCK4 1378 aa28.59■■■□□ 2.17
SRRM1-206ENST00000466910 ASXL1Q8IXJ9 1541 aa28.59■■■□□ 2.17
SRRM1-206ENST00000466910 ADGRF5Q8IZF2 1346 aa28.58■■■□□ 2.17
SRRM1-206ENST00000466910 PPLO60437 1756 aa28.57■■■□□ 2.16
SRRM1-206ENST00000466910 SPATA31E1Q6ZUB1 1445 aa28.56■■■□□ 2.16
SRRM1-206ENST00000466910 LRRC59Q96AG4 307 aaKnown RBP28.55■■■□□ 2.16
SRRM1-206ENST00000466910 PRAG1Q86YV5 1406 aa28.54■■■□□ 2.16
SRRM1-206ENST00000466910 SETD1AO15047 1707 aaKnown RBP28.53■■■□□ 2.16
SRRM1-206ENST00000466910 NALCNQ8IZF0 1738 aa28.52■■■□□ 2.16
SRRM1-206ENST00000466910 NUTM2BA6NNL0 878 aaPredicted RBP28.51■■■□□ 2.15
SRRM1-206ENST00000466910 NUTM2EB1AL46 878 aaPredicted RBP28.51■■■□□ 2.15
SRRM1-206ENST00000466910 NUTM2AQ8IVF1 878 aaPredicted RBP28.51■■■□□ 2.15
SRRM1-206ENST00000466910 C1orf167Q5SNV9 1468 aa28.51■■■□□ 2.15
SRRM1-206ENST00000466910 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
SRRM1-206ENST00000466910 SHPRHQ149N8 1683 aa28.49■■■□□ 2.15
SRRM1-206ENST00000466910 ZNF772Q68DY9 489 aaPredicted RBP28.49■■■□□ 2.15
SRRM1-206ENST00000466910 DDX17Q92841 729 aaKnown RBP28.49■■■□□ 2.15
SRRM1-206ENST00000466910 STK26Q9P289 416 aa28.49■■■□□ 2.15
SRRM1-206ENST00000466910 LRP6O75581 1613 aa28.49■■■□□ 2.15
SRRM1-206ENST00000466910 ORAI2Q96SN7 254 aa28.45■■■□□ 2.14
SRRM1-206ENST00000466910 NHSL1Q5SYE7 1610 aa28.44■■■□□ 2.14
SRRM1-206ENST00000466910 TMEM132EQ6IEE7 984 aa28.44■■■□□ 2.14
SRRM1-206ENST00000466910 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
SRRM1-206ENST00000466910 LRPPRCP42704 1394 aaKnown RBP28.43■■■□□ 2.14
SRRM1-206ENST00000466910 ABCC11Q96J66 1382 aa28.41■■■□□ 2.14
SRRM1-206ENST00000466910 WAPLQ7Z5K2 1190 aa28.41■■■□□ 2.14
SRRM1-206ENST00000466910 TECPR2O15040 1411 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms