RNA–Protein interactions for RNA: ENST00000466673.1

KDM4C-207, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 537 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-207ENST00000466673 UBAP1LF5GYI3 381 aa15.05■□□□□ -0
KDM4C-207ENST00000466673 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ -0
KDM4C-207ENST00000466673 SCAF11Q99590 1463 aaKnown RBP15.04■□□□□ -0
KDM4C-207ENST00000466673 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
KDM4C-207ENST00000466673 ANKRD30AQ9BXX3 1397 aa15.02■□□□□ -0
KDM4C-207ENST00000466673 LRRC7Q96NW7 1537 aa15.02□□□□□ -0.01
KDM4C-207ENST00000466673 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
KDM4C-207ENST00000466673 UNC13BO14795 1591 aa15□□□□□ -0.01
KDM4C-207ENST00000466673 ILDR2Q71H61 639 aa15□□□□□ -0.01
KDM4C-207ENST00000466673 TET3O43151 1660 aa15□□□□□ -0.01
KDM4C-207ENST00000466673 KANK1Q14678 1352 aa14.99□□□□□ -0.01
KDM4C-207ENST00000466673 ADGRB3O60242 1522 aa14.99□□□□□ -0.01
KDM4C-207ENST00000466673 NOS1P29475 1434 aa14.99□□□□□ -0.01
KDM4C-207ENST00000466673 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
KDM4C-207ENST00000466673 MED1Q15648 1581 aaPredicted RBP14.97□□□□□ -0.01
KDM4C-207ENST00000466673 RPRD2Q5VT52 1461 aaKnown RBP14.96□□□□□ -0.01
KDM4C-207ENST00000466673 LTKP29376 864 aa14.96□□□□□ -0.01
KDM4C-207ENST00000466673 TMEM2Q9UHN6 1383 aa14.96□□□□□ -0.02
KDM4C-207ENST00000466673 TOM1O60784 492 aa14.95□□□□□ -0.02
KDM4C-207ENST00000466673 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
KDM4C-207ENST00000466673 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
KDM4C-207ENST00000466673 ANKRD50Q9ULJ7 1429 aa14.94□□□□□ -0.02
KDM4C-207ENST00000466673 NWD1Q149M9 1564 aa14.94□□□□□ -0.02
KDM4C-207ENST00000466673 E9PCH4 1651 aa14.93□□□□□ -0.02
KDM4C-207ENST00000466673 IQGAP3Q86VI3 1631 aa14.93□□□□□ -0.02
KDM4C-207ENST00000466673 TMEM131LA2VDJ0 1609 aa14.92□□□□□ -0.02
KDM4C-207ENST00000466673 HSPA1LP34931 641 aa14.92□□□□□ -0.02
KDM4C-207ENST00000466673 SOCS7O14512 581 aa14.91□□□□□ -0.02
KDM4C-207ENST00000466673 TXNDC2Q86VQ3 553 aa14.91□□□□□ -0.02
KDM4C-207ENST00000466673 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
KDM4C-207ENST00000466673 IDI1Q13907 227 aa14.9□□□□□ -0.02
KDM4C-207ENST00000466673 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
KDM4C-207ENST00000466673 ROCK1Q13464 1354 aa14.88□□□□□ -0.03
KDM4C-207ENST00000466673 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
KDM4C-207ENST00000466673 EID1Q9Y6B2 187 aa14.88□□□□□ -0.03
KDM4C-207ENST00000466673 ZFYVE9O95405 1425 aa14.88□□□□□ -0.03
KDM4C-207ENST00000466673 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
KDM4C-207ENST00000466673 NKTRP30414 1462 aaKnown RBP14.87□□□□□ -0.03
KDM4C-207ENST00000466673 SLC52A1Q9NWF4 448 aa14.85□□□□□ -0.03
KDM4C-207ENST00000466673 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
KDM4C-207ENST00000466673 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
KDM4C-207ENST00000466673 ROBO1Q9Y6N7 1651 aa14.83□□□□□ -0.04
KDM4C-207ENST00000466673 SPHKAPQ2M3C7 1700 aa14.83□□□□□ -0.04
KDM4C-207ENST00000466673 DIP2AQ14689 1571 aa14.81□□□□□ -0.04
KDM4C-207ENST00000466673 TMEM94Q12767 1356 aa14.81□□□□□ -0.04
KDM4C-207ENST00000466673 PLEKHG1Q9ULL1 1385 aa14.81□□□□□ -0.04
KDM4C-207ENST00000466673 KCNA6P17658 529 aa14.8□□□□□ -0.04
KDM4C-207ENST00000466673 RIMS2Q9UQ26 1411 aa14.8□□□□□ -0.04
KDM4C-207ENST00000466673 FAM135BQ49AJ0 1406 aa14.79□□□□□ -0.04
KDM4C-207ENST00000466673 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
KDM4C-207ENST00000466673 NRXN3Q9Y4C0 1643 aa14.77□□□□□ -0.05
KDM4C-207ENST00000466673 ADAMTS13Q76LX8 1427 aa14.76□□□□□ -0.05
KDM4C-207ENST00000466673 PHLPP1O60346 1717 aa14.74□□□□□ -0.05
KDM4C-207ENST00000466673 XRN1Q8IZH2 1706 aaKnown RBP14.74□□□□□ -0.05
KDM4C-207ENST00000466673 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
KDM4C-207ENST00000466673 NUP155O75694 1391 aa14.73□□□□□ -0.05
KDM4C-207ENST00000466673 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
KDM4C-207ENST00000466673 TRPM2O94759 1503 aa14.73□□□□□ -0.05
KDM4C-207ENST00000466673 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.73□□□□□ -0.05
KDM4C-207ENST00000466673 PROSER2Q86WR7 435 aaPredicted RBP14.72□□□□□ -0.05
KDM4C-207ENST00000466673 CLTCL1P53675 1640 aa14.72□□□□□ -0.05
KDM4C-207ENST00000466673 NCOA3Q9Y6Q9 1424 aa14.72□□□□□ -0.05
KDM4C-207ENST00000466673 PIK3R4Q99570 1358 aa14.72□□□□□ -0.05
KDM4C-207ENST00000466673 COL16A1Q07092 1604 aaPredicted RBP14.71□□□□□ -0.05
KDM4C-207ENST00000466673 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
KDM4C-207ENST00000466673 TBX22Q9Y458 520 aa14.71□□□□□ -0.05
KDM4C-207ENST00000466673 MSH6P52701 1360 aa14.71□□□□□ -0.06
KDM4C-207ENST00000466673 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
KDM4C-207ENST00000466673 RBM33Q96EV2 1170 aaKnown RBP14.7□□□□□ -0.06
KDM4C-207ENST00000466673 KIF1BO60333 1816 aa14.7□□□□□ -0.06
KDM4C-207ENST00000466673 ZBTB22O15209 634 aa14.69□□□□□ -0.06
KDM4C-207ENST00000466673 HDGFP51858 240 aaKnown RBP14.69□□□□□ -0.06
KDM4C-207ENST00000466673 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
KDM4C-207ENST00000466673 NAIPQ13075 1403 aa14.68□□□□□ -0.06
KDM4C-207ENST00000466673 NEXMIFQ5QGS0 1516 aa14.68□□□□□ -0.06
KDM4C-207ENST00000466673 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
KDM4C-207ENST00000466673 PTPRUQ92729 1446 aa14.67□□□□□ -0.06
KDM4C-207ENST00000466673 AHDC1Q5TGY3 1603 aaPredicted RBP14.67□□□□□ -0.06
KDM4C-207ENST00000466673 SETD1AO15047 1707 aaKnown RBP14.67□□□□□ -0.06
KDM4C-207ENST00000466673 ITGAEP38570 1179 aa14.67□□□□□ -0.06
KDM4C-207ENST00000466673 BCANQ96GW7 911 aa14.67□□□□□ -0.06
KDM4C-207ENST00000466673 SHPRHQ149N8 1683 aa14.66□□□□□ -0.06
KDM4C-207ENST00000466673 PPARGC1BQ86YN6 1023 aaKnown RBP14.66□□□□□ -0.06
KDM4C-207ENST00000466673 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
KDM4C-207ENST00000466673 RGS17Q9UGC6 210 aaPredicted RBP14.65□□□□□ -0.06
KDM4C-207ENST00000466673 NALCNQ8IZF0 1738 aa14.64□□□□□ -0.07
KDM4C-207ENST00000466673 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
KDM4C-207ENST00000466673 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
KDM4C-207ENST00000466673 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
KDM4C-207ENST00000466673 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
KDM4C-207ENST00000466673 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
KDM4C-207ENST00000466673 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
KDM4C-207ENST00000466673 NHSL1Q5SYE7 1610 aa14.63□□□□□ -0.07
KDM4C-207ENST00000466673 HFM1A2PYH4 1435 aa14.62□□□□□ -0.07
KDM4C-207ENST00000466673 DCCP43146 1447 aa14.62□□□□□ -0.07
KDM4C-207ENST00000466673 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
KDM4C-207ENST00000466673 PPLO60437 1756 aa14.62□□□□□ -0.07
KDM4C-207ENST00000466673 JCADQ9P266 1359 aa14.6□□□□□ -0.07
KDM4C-207ENST00000466673 C19orf44Q9H6X5 657 aa14.58□□□□□ -0.08
KDM4C-207ENST00000466673 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms