RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 L3MBTL2Q969R5 705 aa21.4■■□□□ 1.02
SNED1-208ENST00000466618 KDM5AP29375 1690 aaKnown RBP21.4■■□□□ 1.02
SNED1-208ENST00000466618 SETD1BQ9UPS6 1966 aaKnown RBP21.39■■□□□ 1.02
SNED1-208ENST00000466618 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.02
SNED1-208ENST00000466618 TONSLQ96HA7 1378 aa21.39■■□□□ 1.01
SNED1-208ENST00000466618 UHRF1BP1Q6BDS2 1440 aa21.39■■□□□ 1.01
SNED1-208ENST00000466618 KIF1BO60333 1816 aa21.38■■□□□ 1.01
SNED1-208ENST00000466618 NEFLP07196 543 aa21.38■■□□□ 1.01
SNED1-208ENST00000466618 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
SNED1-208ENST00000466618 UBR1Q8IWV7 1749 aa21.37■■□□□ 1.01
SNED1-208ENST00000466618 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
SNED1-208ENST00000466618 RPGRIP1LQ68CZ1 1315 aa21.36■■□□□ 1.01
SNED1-208ENST00000466618 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
SNED1-208ENST00000466618 THEMISQ8N1K5 641 aaPredicted RBP21.34■■□□□ 1.01
SNED1-208ENST00000466618 ZNF326Q5BKZ1 582 aaKnown RBP21.33■■□□□ 1.01
SNED1-208ENST00000466618 TMEM2Q9UHN6 1383 aa21.33■■□□□ 1.01
SNED1-208ENST00000466618 ZFYVE9O95405 1425 aa21.33■■□□□ 1
SNED1-208ENST00000466618 NEXMIFQ5QGS0 1516 aa21.32■■□□□ 1
SNED1-208ENST00000466618 DCAF11Q8TEB1 546 aa21.32■■□□□ 1
SNED1-208ENST00000466618 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
SNED1-208ENST00000466618 SLIT1O75093 1534 aa21.31■■□□□ 1
SNED1-208ENST00000466618 STAC3Q96MF2 364 aa21.31■■□□□ 1
SNED1-208ENST00000466618 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
SNED1-208ENST00000466618 LMTK3Q96Q04 1460 aa21.3■■□□□ 1
SNED1-208ENST00000466618 RIMS2Q9UQ26 1411 aa21.29■■□□□ 1
SNED1-208ENST00000466618 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
SNED1-208ENST00000466618 MYOM2P54296 1465 aa21.29■■□□□ 1
SNED1-208ENST00000466618 IFT172Q9UG01 1749 aa21.27■■□□□ 1
SNED1-208ENST00000466618 NRXN1Q9ULB1 1477 aa21.27■■□□□ 1
SNED1-208ENST00000466618 VGFO15240 615 aaPredicted RBP21.26■□□□□ 0.99
SNED1-208ENST00000466618 KDM2AQ9Y2K7 1162 aa21.26■□□□□ 0.99
SNED1-208ENST00000466618 PPLO60437 1756 aa21.26■□□□□ 0.99
SNED1-208ENST00000466618 LTKP29376 864 aa21.26■□□□□ 0.99
SNED1-208ENST00000466618 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
SNED1-208ENST00000466618 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.26■□□□□ 0.99
SNED1-208ENST00000466618 ADGRF5Q8IZF2 1346 aa21.25■□□□□ 0.99
SNED1-208ENST00000466618 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
SNED1-208ENST00000466618 HDGFP51858 240 aaKnown RBP21.24■□□□□ 0.99
SNED1-208ENST00000466618 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
SNED1-208ENST00000466618 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
SNED1-208ENST00000466618 TXNDC2Q86VQ3 553 aa21.22■□□□□ 0.99
SNED1-208ENST00000466618 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
SNED1-208ENST00000466618 EID1Q9Y6B2 187 aa21.21■□□□□ 0.99
SNED1-208ENST00000466618 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
SNED1-208ENST00000466618 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
SNED1-208ENST00000466618 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.98
SNED1-208ENST00000466618 HSPA2P54652 639 aa21.19■□□□□ 0.98
SNED1-208ENST00000466618 PLEKHG1Q9ULL1 1385 aa21.18■□□□□ 0.98
SNED1-208ENST00000466618 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
SNED1-208ENST00000466618 MED14O60244 1454 aa21.15■□□□□ 0.98
SNED1-208ENST00000466618 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
SNED1-208ENST00000466618 C14orf93Q9H972 538 aaKnown RBP21.14■□□□□ 0.98
SNED1-208ENST00000466618 NCKAP5LQ9HCH0 1330 aa21.13■□□□□ 0.97
SNED1-208ENST00000466618 CFAP70Q5T0N1 1121 aa21.13■□□□□ 0.97
SNED1-208ENST00000466618 NRXN3Q9Y4C0 1643 aa21.13■□□□□ 0.97
SNED1-208ENST00000466618 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
SNED1-208ENST00000466618 RALGAPBQ86X10 1494 aa21.11■□□□□ 0.97
SNED1-208ENST00000466618 DEKP35659 375 aaKnown RBP21.1■□□□□ 0.97
SNED1-208ENST00000466618 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
SNED1-208ENST00000466618 NPHP4O75161 1426 aaPredicted RBP21.1■□□□□ 0.97
SNED1-208ENST00000466618 TRPM1Q7Z4N2 1603 aa21.09■□□□□ 0.97
SNED1-208ENST00000466618 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
SNED1-208ENST00000466618 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
SNED1-208ENST00000466618 GPRASP1Q5JY77 1395 aa21.09■□□□□ 0.97
SNED1-208ENST00000466618 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
SNED1-208ENST00000466618 KIAA1210Q9ULL0 1709 aa21.08■□□□□ 0.96
SNED1-208ENST00000466618 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
SNED1-208ENST00000466618 TBX22Q9Y458 520 aa21.07■□□□□ 0.96
SNED1-208ENST00000466618 IQGAP1P46940 1657 aa21.07■□□□□ 0.96
SNED1-208ENST00000466618 ADGRB1O14514 1584 aa21.07■□□□□ 0.96
SNED1-208ENST00000466618 ANP32CO43423 234 aa21.06■□□□□ 0.96
SNED1-208ENST00000466618 LAMC1P11047 1609 aa21.06■□□□□ 0.96
SNED1-208ENST00000466618 STRCQ7RTU9 1775 aa21.05■□□□□ 0.96
SNED1-208ENST00000466618 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
SNED1-208ENST00000466618 SETD1AO15047 1707 aaKnown RBP21.05■□□□□ 0.96
SNED1-208ENST00000466618 ROCK2O75116 1388 aaKnown RBP21.05■□□□□ 0.96
SNED1-208ENST00000466618 ASXL1Q8IXJ9 1541 aa21.05■□□□□ 0.96
SNED1-208ENST00000466618 METP08581 1390 aa21.04■□□□□ 0.96
SNED1-208ENST00000466618 DIP2AQ14689 1571 aa21.04■□□□□ 0.96
SNED1-208ENST00000466618 TMEM132EQ6IEE7 984 aa21.02■□□□□ 0.96
SNED1-208ENST00000466618 CARD11Q9BXL7 1154 aa21■□□□□ 0.95
SNED1-208ENST00000466618 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
SNED1-208ENST00000466618 IRX6P78412 446 aaPredicted RBP20.98■□□□□ 0.95
SNED1-208ENST00000466618 PTPRUQ92729 1446 aa20.97■□□□□ 0.95
SNED1-208ENST00000466618 YTHDC2Q9H6S0 1430 aaKnown RBP20.97■□□□□ 0.95
SNED1-208ENST00000466618 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
SNED1-208ENST00000466618 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
SNED1-208ENST00000466618 ABCC11Q96J66 1382 aa20.95■□□□□ 0.95
SNED1-208ENST00000466618 DMRT2Q9Y5R5 561 aa20.95■□□□□ 0.94
SNED1-208ENST00000466618 TECPR2O15040 1411 aa20.94■□□□□ 0.94
SNED1-208ENST00000466618 USP47Q96K76 1375 aa20.92■□□□□ 0.94
SNED1-208ENST00000466618 TRAK1Q9UPV9 953 aa20.92■□□□□ 0.94
SNED1-208ENST00000466618 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
SNED1-208ENST00000466618 STK26Q9P289 416 aa20.91■□□□□ 0.94
SNED1-208ENST00000466618 ERICH6BQ5W0A0 696 aa20.9■□□□□ 0.94
SNED1-208ENST00000466618 DLC1Q96QB1 1528 aa20.9■□□□□ 0.94
SNED1-208ENST00000466618 KCNA6P17658 529 aa20.9■□□□□ 0.94
SNED1-208ENST00000466618 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
SNED1-208ENST00000466618 EIF4G2P78344 907 aaKnown RBP eCLIP20.89■□□□□ 0.94
SNED1-208ENST00000466618 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms