RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 CCDC61Q9Y6R9 512 aa6.03□□□□□ -1.44
CLCA3P-202ENST00000466454 GRIN2BQ13224 1484 aa6.02□□□□□ -1.45
CLCA3P-202ENST00000466454 FANCD2Q9BXW9 1451 aa6.02□□□□□ -1.45
CLCA3P-202ENST00000466454 KDM5BQ9UGL1 1544 aa6.02□□□□□ -1.45
CLCA3P-202ENST00000466454 CANXP27824 592 aaKnown RBP6.02□□□□□ -1.45
CLCA3P-202ENST00000466454 FARP1Q9Y4F1 1045 aaPredicted RBP6.02□□□□□ -1.45
CLCA3P-202ENST00000466454 FMN1Q68DA7 1419 aa6.02□□□□□ -1.45
CLCA3P-202ENST00000466454 POLA1P09884 1462 aaPredicted RBP6.01□□□□□ -1.45
CLCA3P-202ENST00000466454 PHLDB1Q86UU1 1377 aa6.01□□□□□ -1.45
CLCA3P-202ENST00000466454 ARHGEF1Q92888 912 aaKnown RBP6.01□□□□□ -1.45
CLCA3P-202ENST00000466454 HECW1Q76N89 1606 aa6.01□□□□□ -1.45
CLCA3P-202ENST00000466454 HFM1A2PYH4 1435 aa6.01□□□□□ -1.45
CLCA3P-202ENST00000466454 PTPN23Q9H3S7 1636 aa6.01□□□□□ -1.45
CLCA3P-202ENST00000466454 CHRM1P11229 460 aaPredicted RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 SETQ01105 290 aaPredicted RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 GIMAP6Q6P9H5 292 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 POLR1AO95602 1720 aaPredicted RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 SUPT6HQ7KZ85 1726 aaKnown RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 EHBP1L1Q8N3D4 1523 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 NCKAP5LQ9HCH0 1330 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 RBM47A0AV96 593 aaKnown RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 PRKAR2AP13861 404 aaKnown RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 PSEN1P49768 467 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 HIRIP3Q9BW71 556 aaPredicted RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 KCNG1Q9UIX4 513 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 TXNDC2Q86VQ3 553 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 TMTC2Q8N394 836 aa6□□□□□ -1.45
CLCA3P-202ENST00000466454 LAS1LQ9Y4W2 734 aaKnown RBP6□□□□□ -1.45
CLCA3P-202ENST00000466454 UGGT2Q9NYU1 1516 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 FAM50AQ14320 339 aaKnown RBP5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 GRIPAP1Q4V328 841 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 EVI5LQ96CN4 794 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 TARBP1Q13395 1621 aaKnown RBP5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 ANKRD62A6NC57 917 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 KCNA1Q09470 495 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 CCER2I3L3R5 266 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 RBM10P98175 930 aaKnown RBP5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 SND1Q7KZF4 910 aaKnown RBP eCLIP5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 MRRFQ96E11 262 aaKnown RBP5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 UACAQ9BZF9 1416 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 CCDC18Q5T9S5 1454 aa5.99□□□□□ -1.45
CLCA3P-202ENST00000466454 MICAL1Q8TDZ2 1067 aa5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 MS4A4AQ96JQ5 239 aa5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 FGD6Q6ZV73 1430 aa5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 FOXD4L6Q3SYB3 417 aaPredicted RBP5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 HSP90AB4PQ58FF6 505 aa5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 FOXD4L3Q6VB84 417 aaPredicted RBP5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 PHF12Q96QT6 1004 aa5.98□□□□□ -1.45
CLCA3P-202ENST00000466454 TPD52L2O43399 206 aaKnown RBP5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 PPP1R15AO75807 674 aaPredicted RBP5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 DRC1Q96MC2 740 aa5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 RBM27Q9P2N5 1060 aaKnown RBP5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 IVNS1ABPQ9Y6Y0 642 aa5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 SKIV2LQ15477 1246 aaKnown RBP5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 FBXO22Q8NEZ5 403 aa5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 RBM42Q9BTD8 480 aaKnown RBP5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 RAB11FIP3O75154 756 aa5.97□□□□□ -1.45
CLCA3P-202ENST00000466454 RBM26Q5T8P6 1007 aaKnown RBP5.96□□□□□ -1.45
CLCA3P-202ENST00000466454 URB2Q14146 1524 aaKnown RBP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 PDAP1Q13442 181 aaKnown RBP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 DNAJC2Q99543 621 aaKnown RBP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 PBRM1Q86U86 1689 aa5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 MLLT3P42568 568 aaPredicted RBP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 SPTY2D1Q68D10 685 aaPredicted RBP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 GPATCH11Q8N954 259 aa5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 SUPT16HQ9Y5B9 1047 aaKnown RBP5.96□□□□□ -1.46
CLCA3P-202ENST00000466454 MYOM3Q5VTT5 1437 aa5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 MIA2Q96PC5 1412 aa5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 NCOA2Q15596 1464 aa5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 NOM1Q5C9Z4 860 aaKnown RBP5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 GPATCH3Q96I76 525 aa5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 LARP6Q9BRS8 491 aaKnown RBP5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 NME8Q8N427 588 aa5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 SREK1Q8WXA9 508 aaKnown RBP5.95□□□□□ -1.46
CLCA3P-202ENST00000466454 NAIPQ13075 1403 aa5.94□□□□□ -1.46
CLCA3P-202ENST00000466454 APBB1IPQ7Z5R6 666 aaPredicted RBP5.94□□□□□ -1.46
CLCA3P-202ENST00000466454 SECISBP2LQ93073 1101 aaKnown RBP5.94□□□□□ -1.46
CLCA3P-202ENST00000466454 MYH16Q9H6N6 1097 aa5.94□□□□□ -1.46
CLCA3P-202ENST00000466454 ADAMTS12P58397 1594 aa5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 DENND4BO75064 1496 aaPredicted RBP5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 RAD54L2Q9Y4B4 1467 aa5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 FOSBP53539 338 aa5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 CDCA7Q9BWT1 371 aaPredicted RBP5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 MYT1LQ9UL68 1186 aa5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 ADCY10Q96PN6 1610 aa5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 PTPRKQ15262 1439 aa5.93□□□□□ -1.46
CLCA3P-202ENST00000466454 WDR62O43379 1518 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 WWC1Q8IX03 1113 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 FAM9BQ8IZU0 186 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 KRI1Q8N9T8 703 aaKnown RBP5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 FHOD3Q2V2M9 1422 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 ROCK1Q13464 1354 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 ZNF467Q7Z7K2 595 aaPredicted RBP5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 SGIP1Q9BQI5 828 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 GAPVD1Q14C86 1478 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 MAGI3Q5TCQ9 1506 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 E2F4Q16254 413 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 DPY19L2Q6NUT2 758 aa5.92□□□□□ -1.46
CLCA3P-202ENST00000466454 NESP48681 1621 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms