RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
ATP2B4-206ENST00000466407 MLECQ14165 292 aa9.66□□□□□ -0.86
ATP2B4-206ENST00000466407 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
ATP2B4-206ENST00000466407 PRAG1Q86YV5 1406 aa9.65□□□□□ -0.86
ATP2B4-206ENST00000466407 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
ATP2B4-206ENST00000466407 FOXD1Q16676 465 aa9.65□□□□□ -0.86
ATP2B4-206ENST00000466407 ARHGAP23Q9P227 1491 aa9.65□□□□□ -0.87
ATP2B4-206ENST00000466407 POLR1AO95602 1720 aaPredicted RBP9.65□□□□□ -0.87
ATP2B4-206ENST00000466407 GPRASP1Q5JY77 1395 aa9.64□□□□□ -0.87
ATP2B4-206ENST00000466407 NEUROD1Q13562 356 aa9.64□□□□□ -0.87
ATP2B4-206ENST00000466407 L3MBTL2Q969R5 705 aa9.64□□□□□ -0.87
ATP2B4-206ENST00000466407 SIN3AQ96ST3 1273 aa9.64□□□□□ -0.87
ATP2B4-206ENST00000466407 IDI1Q13907 227 aa9.63□□□□□ -0.87
ATP2B4-206ENST00000466407 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
ATP2B4-206ENST00000466407 PIK3C2GO75747 1445 aa9.63□□□□□ -0.87
ATP2B4-206ENST00000466407 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
ATP2B4-206ENST00000466407 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
ATP2B4-206ENST00000466407 KNDC1Q76NI1 1749 aa9.61□□□□□ -0.87
ATP2B4-206ENST00000466407 IQGAP1P46940 1657 aa9.61□□□□□ -0.87
ATP2B4-206ENST00000466407 EIF3AQ14152 1382 aaKnown RBP9.6□□□□□ -0.87
ATP2B4-206ENST00000466407 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 RIMS2Q9UQ26 1411 aa9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 FBXO31Q5XUX0 539 aaPredicted RBP9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 DCAF11Q8TEB1 546 aa9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 EID1Q9Y6B2 187 aa9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 PLEKHG1Q9ULL1 1385 aa9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 MED14O60244 1454 aa9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
ATP2B4-206ENST00000466407 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
ATP2B4-206ENST00000466407 SBNO2Q9Y2G9 1366 aa9.57□□□□□ -0.88
ATP2B4-206ENST00000466407 DLC1Q96QB1 1528 aa9.56□□□□□ -0.88
ATP2B4-206ENST00000466407 NRXN3Q9Y4C0 1643 aa9.56□□□□□ -0.88
ATP2B4-206ENST00000466407 ROCK2O75116 1388 aaKnown RBP9.56□□□□□ -0.88
ATP2B4-206ENST00000466407 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
ATP2B4-206ENST00000466407 ADGRB1O14514 1584 aa9.55□□□□□ -0.88
ATP2B4-206ENST00000466407 CHGAP10645 457 aaKnown RBP9.55□□□□□ -0.88
ATP2B4-206ENST00000466407 RGL3Q3MIN7 710 aa9.55□□□□□ -0.88
ATP2B4-206ENST00000466407 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
ATP2B4-206ENST00000466407 ARHGEF28Q8N1W1 1705 aaKnown RBP9.54□□□□□ -0.88
ATP2B4-206ENST00000466407 EIF4G2P78344 907 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATP2B4-206ENST00000466407 TECPR2O15040 1411 aa9.54□□□□□ -0.88
ATP2B4-206ENST00000466407 CPS1P31327 1500 aa9.53□□□□□ -0.88
ATP2B4-206ENST00000466407 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
ATP2B4-206ENST00000466407 CHD2O14647 1828 aaKnown RBP9.53□□□□□ -0.88
ATP2B4-206ENST00000466407 CEBPAP49715 358 aaPredicted RBP9.52□□□□□ -0.89
ATP2B4-206ENST00000466407 SIRT1Q96EB6 747 aa9.52□□□□□ -0.89
ATP2B4-206ENST00000466407 USP47Q96K76 1375 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 FAM135BQ49AJ0 1406 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 NBPF8Q3BBV2 869 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 CARD11Q9BXL7 1154 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 TBX22Q9Y458 520 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 LMTK3Q96Q04 1460 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 ADGRF5Q8IZF2 1346 aa9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
ATP2B4-206ENST00000466407 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 NWD1Q149M9 1564 aa9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 PTCH1Q13635 1447 aa9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 PUS7Q96PZ0 661 aaKnown RBP9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 QRICH2Q9H0J4 1663 aa9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 LRPPRCP42704 1394 aaKnown RBP9.5□□□□□ -0.89
ATP2B4-206ENST00000466407 ADAMTS13Q76LX8 1427 aa9.49□□□□□ -0.89
ATP2B4-206ENST00000466407 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
ATP2B4-206ENST00000466407 ADGRB2O60241 1585 aa9.49□□□□□ -0.89
ATP2B4-206ENST00000466407 NPHP4O75161 1426 aaPredicted RBP9.48□□□□□ -0.89
ATP2B4-206ENST00000466407 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
ATP2B4-206ENST00000466407 NKTRP30414 1462 aaKnown RBP9.48□□□□□ -0.89
ATP2B4-206ENST00000466407 ASXL1Q8IXJ9 1541 aa9.48□□□□□ -0.89
ATP2B4-206ENST00000466407 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
ATP2B4-206ENST00000466407 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
ATP2B4-206ENST00000466407 DMRT2Q9Y5R5 561 aa9.47□□□□□ -0.89
ATP2B4-206ENST00000466407 NINLQ9Y2I6 1382 aa9.47□□□□□ -0.89
ATP2B4-206ENST00000466407 STRCQ7RTU9 1775 aa9.47□□□□□ -0.89
ATP2B4-206ENST00000466407 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
ATP2B4-206ENST00000466407 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
ATP2B4-206ENST00000466407 FBXO41Q8TF61 875 aa9.45□□□□□ -0.9
ATP2B4-206ENST00000466407 LTKP29376 864 aa9.44□□□□□ -0.9
ATP2B4-206ENST00000466407 CENPJQ9HC77 1338 aaPredicted RBP9.44□□□□□ -0.9
ATP2B4-206ENST00000466407 TMF1P82094 1093 aa9.43□□□□□ -0.9
ATP2B4-206ENST00000466407 HSPA5P11021 654 aaKnown RBP9.42□□□□□ -0.9
ATP2B4-206ENST00000466407 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
ATP2B4-206ENST00000466407 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
ATP2B4-206ENST00000466407 DCCP43146 1447 aa9.41□□□□□ -0.9
ATP2B4-206ENST00000466407 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
ATP2B4-206ENST00000466407 METP08581 1390 aa9.4□□□□□ -0.9
ATP2B4-206ENST00000466407 EVC2Q86UK5 1308 aa9.4□□□□□ -0.9
ATP2B4-206ENST00000466407 ST20-MTHFSA0A0A6YYL1 179 aa9.4□□□□□ -0.9
ATP2B4-206ENST00000466407 BCANQ96GW7 911 aa9.4□□□□□ -0.9
ATP2B4-206ENST00000466407 TESK2Q96S53 571 aa9.4□□□□□ -0.9
ATP2B4-206ENST00000466407 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
ATP2B4-206ENST00000466407 KCNA6P17658 529 aa9.39□□□□□ -0.91
ATP2B4-206ENST00000466407 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
ATP2B4-206ENST00000466407 WASHC2AQ641Q2 1341 aa9.38□□□□□ -0.91
ATP2B4-206ENST00000466407 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
ATP2B4-206ENST00000466407 MYOM1P52179 1685 aa9.38□□□□□ -0.91
ATP2B4-206ENST00000466407 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
ATP2B4-206ENST00000466407 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
ATP2B4-206ENST00000466407 TULP4Q9NRJ4 1543 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms