RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 TRPM1Q7Z4N2 1603 aa30.71■■■□□ 2.51
ITGA4-204ENST00000465522 EIF4G2P78344 907 aaKnown RBP eCLIP30.7■■■□□ 2.5
ITGA4-204ENST00000465522 NEXMIFQ5QGS0 1516 aa30.69■■■□□ 2.5
ITGA4-204ENST00000465522 ROCK2O75116 1388 aaKnown RBP30.69■■■□□ 2.5
ITGA4-204ENST00000465522 CARD11Q9BXL7 1154 aa30.69■■■□□ 2.5
ITGA4-204ENST00000465522 NUTM2DQ5VT03 806 aaPredicted RBP30.68■■■□□ 2.5
ITGA4-204ENST00000465522 NBPF1Q3BBV0 1214 aa30.67■■■□□ 2.5
ITGA4-204ENST00000465522 NRXN1Q9ULB1 1477 aa30.65■■■□□ 2.5
ITGA4-204ENST00000465522 HIRIP3Q9BW71 556 aaPredicted RBP30.65■■■□□ 2.5
ITGA4-204ENST00000465522 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
ITGA4-204ENST00000465522 HSPA5P11021 654 aaKnown RBP30.64■■■□□ 2.5
ITGA4-204ENST00000465522 SETD1BQ9UPS6 1966 aaKnown RBP30.63■■■□□ 2.49
ITGA4-204ENST00000465522 UBR1Q8IWV7 1749 aa30.63■■■□□ 2.49
ITGA4-204ENST00000465522 ZFYVE9O95405 1425 aa30.63■■■□□ 2.49
ITGA4-204ENST00000465522 PTPRMP28827 1452 aa30.62■■■□□ 2.49
ITGA4-204ENST00000465522 GPRASP1Q5JY77 1395 aa30.6■■■□□ 2.49
ITGA4-204ENST00000465522 HDGFP51858 240 aaKnown RBP30.6■■■□□ 2.49
ITGA4-204ENST00000465522 CFAP70Q5T0N1 1121 aa30.6■■■□□ 2.49
ITGA4-204ENST00000465522 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
ITGA4-204ENST00000465522 KIAA1210Q9ULL0 1709 aa30.59■■■□□ 2.49
ITGA4-204ENST00000465522 PIK3C2GO75747 1445 aa30.59■■■□□ 2.49
ITGA4-204ENST00000465522 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.58■■■□□ 2.49
ITGA4-204ENST00000465522 USP47Q96K76 1375 aa30.57■■■□□ 2.49
ITGA4-204ENST00000465522 MYO3AQ8NEV4 1616 aa30.57■■■□□ 2.48
ITGA4-204ENST00000465522 C14orf93Q9H972 538 aaKnown RBP30.56■■■□□ 2.48
ITGA4-204ENST00000465522 THEMISQ8N1K5 641 aaPredicted RBP30.55■■■□□ 2.48
ITGA4-204ENST00000465522 TMEM2Q9UHN6 1383 aa30.55■■■□□ 2.48
ITGA4-204ENST00000465522 LAMC1P11047 1609 aa30.53■■■□□ 2.48
ITGA4-204ENST00000465522 SENP3Q9H4L4 574 aaPredicted RBP30.5■■■□□ 2.47
ITGA4-204ENST00000465522 CEP170BQ9Y4F5 1589 aaPredicted RBP30.49■■■□□ 2.47
ITGA4-204ENST00000465522 KDM4FA0A1W2PPD8 638 aa30.47■■■□□ 2.47
ITGA4-204ENST00000465522 EID1Q9Y6B2 187 aa30.47■■■□□ 2.47
ITGA4-204ENST00000465522 ST20-MTHFSA0A0A6YYL1 179 aa30.45■■■□□ 2.47
ITGA4-204ENST00000465522 TXNDC2Q86VQ3 553 aa30.44■■■□□ 2.46
ITGA4-204ENST00000465522 SETBP1Q9Y6X0 1596 aa30.44■■■□□ 2.46
ITGA4-204ENST00000465522 LTKP29376 864 aa30.43■■■□□ 2.46
ITGA4-204ENST00000465522 SLIT1O75093 1534 aa30.43■■■□□ 2.46
ITGA4-204ENST00000465522 ZNF142P52746 1687 aaPredicted RBP30.43■■■□□ 2.46
ITGA4-204ENST00000465522 SCAF11Q99590 1463 aaKnown RBP30.42■■■□□ 2.46
ITGA4-204ENST00000465522 TMEM132EQ6IEE7 984 aa30.42■■■□□ 2.46
ITGA4-204ENST00000465522 ARHGAP23Q9P227 1491 aa30.41■■■□□ 2.46
ITGA4-204ENST00000465522 BCANQ96GW7 911 aa30.4■■■□□ 2.46
ITGA4-204ENST00000465522 IQGAP1P46940 1657 aa30.39■■■□□ 2.46
ITGA4-204ENST00000465522 ADGRB1O14514 1584 aa30.38■■■□□ 2.45
ITGA4-204ENST00000465522 ALKQ9UM73 1620 aa30.38■■■□□ 2.45
ITGA4-204ENST00000465522 DIEXFQ68CQ4 756 aaKnown RBP30.36■■■□□ 2.45
ITGA4-204ENST00000465522 EIF3AQ14152 1382 aaKnown RBP30.36■■■□□ 2.45
ITGA4-204ENST00000465522 PLEKHG1Q9ULL1 1385 aa30.34■■■□□ 2.45
ITGA4-204ENST00000465522 TRAK1Q9UPV9 953 aa30.33■■■□□ 2.45
ITGA4-204ENST00000465522 C11orf95C9JLR9 678 aaPredicted RBP30.33■■■□□ 2.45
ITGA4-204ENST00000465522 NRXN3Q9Y4C0 1643 aa30.31■■■□□ 2.44
ITGA4-204ENST00000465522 ANKLE2Q86XL3 938 aa30.31■■■□□ 2.44
ITGA4-204ENST00000465522 WASHC2AQ641Q2 1341 aa30.31■■■□□ 2.44
ITGA4-204ENST00000465522 TESK2Q96S53 571 aa30.28■■■□□ 2.44
ITGA4-204ENST00000465522 STK26Q9P289 416 aa30.28■■■□□ 2.44
ITGA4-204ENST00000465522 ASXL1Q8IXJ9 1541 aa30.28■■■□□ 2.44
ITGA4-204ENST00000465522 DDX10Q13206 875 aaKnown RBP30.27■■■□□ 2.44
ITGA4-204ENST00000465522 SETD1AO15047 1707 aaKnown RBP30.27■■■□□ 2.44
ITGA4-204ENST00000465522 CCDC7Q96M83 1385 aa30.26■■■□□ 2.43
ITGA4-204ENST00000465522 YTHDC2Q9H6S0 1430 aaKnown RBP30.26■■■□□ 2.43
ITGA4-204ENST00000465522 POLR1AO95602 1720 aaPredicted RBP30.25■■■□□ 2.43
ITGA4-204ENST00000465522 ADAMTS13Q76LX8 1427 aa30.24■■■□□ 2.43
ITGA4-204ENST00000465522 KIF7Q2M1P5 1343 aa30.24■■■□□ 2.43
ITGA4-204ENST00000465522 CENPJQ9HC77 1338 aaPredicted RBP30.23■■■□□ 2.43
ITGA4-204ENST00000465522 SLC26A8Q96RN1 970 aa30.22■■■□□ 2.43
ITGA4-204ENST00000465522 METP08581 1390 aa30.22■■■□□ 2.43
ITGA4-204ENST00000465522 TMF1P82094 1093 aa30.22■■■□□ 2.43
ITGA4-204ENST00000465522 SLC24A1O60721 1099 aa30.21■■■□□ 2.43
ITGA4-204ENST00000465522 TBX22Q9Y458 520 aa30.2■■■□□ 2.43
ITGA4-204ENST00000465522 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
ITGA4-204ENST00000465522 LRPPRCP42704 1394 aaKnown RBP30.18■■■□□ 2.42
ITGA4-204ENST00000465522 MED14O60244 1454 aa30.18■■■□□ 2.42
ITGA4-204ENST00000465522 ARHGEF28Q8N1W1 1705 aaKnown RBP30.18■■■□□ 2.42
ITGA4-204ENST00000465522 ABCC11Q96J66 1382 aa30.16■■■□□ 2.42
ITGA4-204ENST00000465522 DISP3Q9P2K9 1392 aa30.14■■■□□ 2.42
ITGA4-204ENST00000465522 POGKQ9P215 609 aa30.14■■■□□ 2.42
ITGA4-204ENST00000465522 DIP2AQ14689 1571 aa30.13■■■□□ 2.41
ITGA4-204ENST00000465522 SBNO2Q9Y2G9 1366 aa30.13■■■□□ 2.41
ITGA4-204ENST00000465522 PRAM1Q96QH2 718 aa30.13■■■□□ 2.41
ITGA4-204ENST00000465522 NCKAP5LQ9HCH0 1330 aa30.12■■■□□ 2.41
ITGA4-204ENST00000465522 QRICH2Q9H0J4 1663 aa30.12■■■□□ 2.41
ITGA4-204ENST00000465522 CDCA8Q53HL2 280 aa30.11■■■□□ 2.41
ITGA4-204ENST00000465522 SAFB2Q14151 953 aaKnown RBP eCLIP30.1■■■□□ 2.41
ITGA4-204ENST00000465522 DLC1Q96QB1 1528 aa30.1■■■□□ 2.41
ITGA4-204ENST00000465522 NPHP4O75161 1426 aaPredicted RBP30.08■■■□□ 2.41
ITGA4-204ENST00000465522 HSPA2P54652 639 aa30.08■■■□□ 2.41
ITGA4-204ENST00000465522 SIRT1Q96EB6 747 aa30.07■■■□□ 2.4
ITGA4-204ENST00000465522 WAPLQ7Z5K2 1190 aa30.06■■■□□ 2.4
ITGA4-204ENST00000465522 AMOTL2Q9Y2J4 779 aa30.05■■■□□ 2.4
ITGA4-204ENST00000465522 KNDC1Q76NI1 1749 aa30.05■■■□□ 2.4
ITGA4-204ENST00000465522 TECPR2O15040 1411 aa30.05■■■□□ 2.4
ITGA4-204ENST00000465522 LMTK3Q96Q04 1460 aa30.05■■■□□ 2.4
ITGA4-204ENST00000465522 PIK3R4Q99570 1358 aa30.04■■■□□ 2.4
ITGA4-204ENST00000465522 PTPRUQ92729 1446 aa30.04■■■□□ 2.4
ITGA4-204ENST00000465522 FAM135BQ49AJ0 1406 aa30.02■■■□□ 2.4
ITGA4-204ENST00000465522 EVC2Q86UK5 1308 aa30.01■■■□□ 2.39
ITGA4-204ENST00000465522 MINK1Q8N4C8 1332 aaPredicted RBP30.01■■■□□ 2.39
ITGA4-204ENST00000465522 CPS1P31327 1500 aa30■■■□□ 2.39
ITGA4-204ENST00000465522 PLEKHH1Q9ULM0 1364 aa29.99■■■□□ 2.39
ITGA4-204ENST00000465522 ROBO2Q9HCK4 1378 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms