RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 APPP05067 770 aa10.01□□□□□ -0.81
RTL9-201ENST00000465301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.01□□□□□ -0.81
RTL9-201ENST00000465301 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
RTL9-201ENST00000465301 MPHOSPH9Q99550 1183 aa10□□□□□ -0.81
RTL9-201ENST00000465301 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
RTL9-201ENST00000465301 TEX35Q5T0J7 233 aa10□□□□□ -0.81
RTL9-201ENST00000465301 NFXL1Q6ZNB6 911 aa10□□□□□ -0.81
RTL9-201ENST00000465301 RUFY1Q96T51 708 aa10□□□□□ -0.81
RTL9-201ENST00000465301 XBP1P17861 261 aa10□□□□□ -0.81
RTL9-201ENST00000465301 CCDC18Q5T9S5 1454 aa10□□□□□ -0.81
RTL9-201ENST00000465301 NGEFQ8N5V2 710 aa10□□□□□ -0.81
RTL9-201ENST00000465301 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
RTL9-201ENST00000465301 KIF15Q9NS87 1388 aa9.99□□□□□ -0.81
RTL9-201ENST00000465301 ZKSCAN2Q63HK3 967 aa9.98□□□□□ -0.81
RTL9-201ENST00000465301 API5Q9BZZ5 524 aaKnown RBP9.98□□□□□ -0.81
RTL9-201ENST00000465301 EPS15P42566 896 aa9.98□□□□□ -0.81
RTL9-201ENST00000465301 DCTN1Q14203 1278 aa9.98□□□□□ -0.81
RTL9-201ENST00000465301 CCAR1Q8IX12 1150 aaKnown RBP9.98□□□□□ -0.81
RTL9-201ENST00000465301 ANO2Q9NQ90 1003 aa9.97□□□□□ -0.81
RTL9-201ENST00000465301 ERC2O15083 957 aa9.97□□□□□ -0.81
RTL9-201ENST00000465301 E9PSI1 815 aa9.96□□□□□ -0.81
RTL9-201ENST00000465301 KLHL34Q8N239 644 aa9.96□□□□□ -0.81
RTL9-201ENST00000465301 PAF1Q8N7H5 531 aa9.96□□□□□ -0.81
RTL9-201ENST00000465301 PHF23Q9BUL5 403 aaPredicted RBP9.96□□□□□ -0.81
RTL9-201ENST00000465301 ZRSR2Q15696 482 aaKnown RBP9.96□□□□□ -0.81
RTL9-201ENST00000465301 HSP90AB2PQ58FF8 381 aa9.96□□□□□ -0.81
RTL9-201ENST00000465301 CENPQQ7L2Z9 268 aaPredicted RBP9.96□□□□□ -0.81
RTL9-201ENST00000465301 FBXO3Q9UK99 471 aa9.96□□□□□ -0.81
RTL9-201ENST00000465301 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.82
RTL9-201ENST00000465301 PSME1Q06323 249 aa9.96□□□□□ -0.82
RTL9-201ENST00000465301 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
RTL9-201ENST00000465301 ARGLU1Q9NWB6 273 aaPredicted RBP9.96□□□□□ -0.82
RTL9-201ENST00000465301 OFD1O75665 1012 aa9.95□□□□□ -0.82
RTL9-201ENST00000465301 SLC3A2P08195 630 aaKnown RBP9.95□□□□□ -0.82
RTL9-201ENST00000465301 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
RTL9-201ENST00000465301 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
RTL9-201ENST00000465301 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
RTL9-201ENST00000465301 DDX49Q9Y6V7 483 aaKnown RBP9.95□□□□□ -0.82
RTL9-201ENST00000465301 NAP1L1P55209 391 aaKnown RBP9.95□□□□□ -0.82
RTL9-201ENST00000465301 RALYLQ86SE5 291 aaKnown RBP9.95□□□□□ -0.82
RTL9-201ENST00000465301 ATF3P18847 181 aa9.95□□□□□ -0.82
RTL9-201ENST00000465301 SF3B2Q13435 895 aaKnown RBP9.94□□□□□ -0.82
RTL9-201ENST00000465301 CCDC73Q6ZRK6 1079 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 RAPGEF4Q8WZA2 1011 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 SOGA1O94964 1423 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
RTL9-201ENST00000465301 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 IPO9Q96P70 1041 aaKnown RBP9.94□□□□□ -0.82
RTL9-201ENST00000465301 CCDC144AA2RUR9 1427 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 SART3Q15020 963 aaKnown RBP9.94□□□□□ -0.82
RTL9-201ENST00000465301 HOMER1Q86YM7 354 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
RTL9-201ENST00000465301 DDX19BQ9UMR2 479 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
RTL9-201ENST00000465301 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
RTL9-201ENST00000465301 NAT10Q9H0A0 1025 aaKnown RBP9.93□□□□□ -0.82
RTL9-201ENST00000465301 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
RTL9-201ENST00000465301 ZFYVE27Q5T4F4 411 aa9.93□□□□□ -0.82
RTL9-201ENST00000465301 SASS6Q6UVJ0 657 aa9.93□□□□□ -0.82
RTL9-201ENST00000465301 ARID3AQ99856 593 aa9.93□□□□□ -0.82
RTL9-201ENST00000465301 PIP4K2AP48426 406 aaPredicted RBP9.93□□□□□ -0.82
RTL9-201ENST00000465301 TRAK1Q9UPV9 953 aa9.93□□□□□ -0.82
RTL9-201ENST00000465301 VPS8Q8N3P4 1428 aa9.93□□□□□ -0.82
RTL9-201ENST00000465301 EIF2S2P20042 333 aaKnown RBP9.93□□□□□ -0.82
RTL9-201ENST00000465301 CCDC191Q8NCU4 936 aa9.92□□□□□ -0.82
RTL9-201ENST00000465301 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
RTL9-201ENST00000465301 NUTM2FA1L443 756 aa9.92□□□□□ -0.82
RTL9-201ENST00000465301 IKQ13123 557 aaPredicted RBP9.92□□□□□ -0.82
RTL9-201ENST00000465301 SYCP1Q15431 976 aa9.92□□□□□ -0.82
RTL9-201ENST00000465301 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
RTL9-201ENST00000465301 FOXD4L4Q8WXT5 416 aaPredicted RBP9.92□□□□□ -0.82
RTL9-201ENST00000465301 TBC1D2BQ9UPU7 963 aa9.92□□□□□ -0.82
RTL9-201ENST00000465301 DIAPH1O60610 1272 aaKnown RBP9.91□□□□□ -0.82
RTL9-201ENST00000465301 HNRNPMP52272 730 aaKnown RBP eCLIP9.91□□□□□ -0.82
RTL9-201ENST00000465301 HSP90B2PQ58FF3 399 aa9.91□□□□□ -0.82
RTL9-201ENST00000465301 RBM19Q9Y4C8 960 aaKnown RBP9.91□□□□□ -0.82
RTL9-201ENST00000465301 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
RTL9-201ENST00000465301 PSMA5P28066 241 aa9.91□□□□□ -0.82
RTL9-201ENST00000465301 AAMPQ13685 434 aa9.91□□□□□ -0.82
RTL9-201ENST00000465301 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
RTL9-201ENST00000465301 SMC3Q9UQE7 1217 aa9.91□□□□□ -0.82
RTL9-201ENST00000465301 TXLNBQ8N3L3 684 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 TXLNAP40222 546 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 INTS3Q68E01 1043 aaKnown RBP9.9□□□□□ -0.82
RTL9-201ENST00000465301 MNS1Q8NEH6 495 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 MIA2Q96PC5 1412 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 DESP17661 470 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 STAC3Q96MF2 364 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 DNAI2Q9GZS0 605 aa9.9□□□□□ -0.82
RTL9-201ENST00000465301 DHX8Q14562 1220 aaKnown RBP9.9□□□□□ -0.83
RTL9-201ENST00000465301 SMARCA2P51531 1590 aa9.9□□□□□ -0.83
RTL9-201ENST00000465301 CCP110O43303 1012 aa9.89□□□□□ -0.83
RTL9-201ENST00000465301 ZNF592Q92610 1267 aa9.89□□□□□ -0.83
RTL9-201ENST00000465301 GNL3LQ9NVN8 582 aaKnown RBP9.89□□□□□ -0.83
RTL9-201ENST00000465301 GNAI1P63096 354 aa9.89□□□□□ -0.83
RTL9-201ENST00000465301 SAMD1Q6SPF0 538 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms