RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 HPS5Q9UPZ3 1129 aa10.61□□□□□ -0.71
PRKD3-206ENST00000464552 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
PRKD3-206ENST00000464552 SLF2Q8IX21 1173 aa10.6□□□□□ -0.71
PRKD3-206ENST00000464552 PPP4CP60510 307 aa10.59□□□□□ -0.71
PRKD3-206ENST00000464552 NECTIN2Q92692 538 aa10.59□□□□□ -0.71
PRKD3-206ENST00000464552 WBP1LQ9NX94 342 aa10.59□□□□□ -0.71
PRKD3-206ENST00000464552 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
PRKD3-206ENST00000464552 PHOX2BQ99453 314 aa10.56□□□□□ -0.72
PRKD3-206ENST00000464552 RNF40O75150 1001 aa10.55□□□□□ -0.72
PRKD3-206ENST00000464552 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
PRKD3-206ENST00000464552 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
PRKD3-206ENST00000464552 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
PRKD3-206ENST00000464552 NLRP7Q8WX94 980 aa10.49□□□□□ -0.73
PRKD3-206ENST00000464552 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
PRKD3-206ENST00000464552 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
PRKD3-206ENST00000464552 PLA2G2EQ9NZK7 142 aa10.48□□□□□ -0.73
PRKD3-206ENST00000464552 SLC10A3P09131 477 aa10.47□□□□□ -0.73
PRKD3-206ENST00000464552 APLP1P51693 650 aa10.47□□□□□ -0.73
PRKD3-206ENST00000464552 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.73
PRKD3-206ENST00000464552 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
PRKD3-206ENST00000464552 AK7Q96M32 723 aa10.46□□□□□ -0.73
PRKD3-206ENST00000464552 CLCN1P35523 988 aa10.45□□□□□ -0.74
PRKD3-206ENST00000464552 MDM2Q00987 491 aaPredicted RBP10.45□□□□□ -0.74
PRKD3-206ENST00000464552 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
PRKD3-206ENST00000464552 AMHR2Q16671 573 aa10.44□□□□□ -0.74
PRKD3-206ENST00000464552 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
PRKD3-206ENST00000464552 TMUB1Q9BVT8 246 aa10.44□□□□□ -0.74
PRKD3-206ENST00000464552 GPCPD1Q9NPB8 672 aa10.44□□□□□ -0.74
PRKD3-206ENST00000464552 CFHP08603 1231 aa10.43□□□□□ -0.74
PRKD3-206ENST00000464552 ACTN4O43707 911 aaKnown RBP10.42□□□□□ -0.74
PRKD3-206ENST00000464552 RDH13Q8NBN7 331 aa10.42□□□□□ -0.74
PRKD3-206ENST00000464552 TRIM66O15016 1216 aa10.41□□□□□ -0.74
PRKD3-206ENST00000464552 TJAP1Q5JTD0 557 aa10.41□□□□□ -0.74
PRKD3-206ENST00000464552 SLC24A3Q9HC58 644 aa10.41□□□□□ -0.74
PRKD3-206ENST00000464552 KCNC4Q03721 635 aa10.4□□□□□ -0.74
PRKD3-206ENST00000464552 MTRQ99707 1265 aa10.4□□□□□ -0.74
PRKD3-206ENST00000464552 CD46P15529 392 aa10.39□□□□□ -0.75
PRKD3-206ENST00000464552 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
PRKD3-206ENST00000464552 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
PRKD3-206ENST00000464552 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
PRKD3-206ENST00000464552 GCGRP47871 477 aa10.38□□□□□ -0.75
PRKD3-206ENST00000464552 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
PRKD3-206ENST00000464552 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
PRKD3-206ENST00000464552 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
PRKD3-206ENST00000464552 COPS2P61201 443 aa10.33□□□□□ -0.76
PRKD3-206ENST00000464552 PDE4DQ08499 809 aa10.33□□□□□ -0.76
PRKD3-206ENST00000464552 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
PRKD3-206ENST00000464552 GIGYF2Q6Y7W6 1299 aaKnown RBP10.33□□□□□ -0.76
PRKD3-206ENST00000464552 PARP9Q8IXQ6 854 aa10.33□□□□□ -0.76
PRKD3-206ENST00000464552 ZPR1O75312 459 aa10.32□□□□□ -0.76
PRKD3-206ENST00000464552 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
PRKD3-206ENST00000464552 FUT2Q10981 343 aa10.32□□□□□ -0.76
PRKD3-206ENST00000464552 ZNF516Q92618 1163 aa10.32□□□□□ -0.76
PRKD3-206ENST00000464552 NR1I2O75469 434 aa10.31□□□□□ -0.76
PRKD3-206ENST00000464552 A0A0G2JS52 829 aa10.3□□□□□ -0.76
PRKD3-206ENST00000464552 KDM4AO75164 1064 aa10.3□□□□□ -0.76
PRKD3-206ENST00000464552 GRIPAP1Q4V328 841 aa10.3□□□□□ -0.76
PRKD3-206ENST00000464552 USP46P62068 366 aa10.29□□□□□ -0.76
PRKD3-206ENST00000464552 MORN1Q5T089 497 aa10.29□□□□□ -0.76
PRKD3-206ENST00000464552 PUS10Q3MIT2 529 aaKnown RBP10.28□□□□□ -0.76
PRKD3-206ENST00000464552 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
PRKD3-206ENST00000464552 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
PRKD3-206ENST00000464552 MS4A1P11836 297 aa10.25□□□□□ -0.77
PRKD3-206ENST00000464552 NUTM1Q86Y26 1132 aa10.25□□□□□ -0.77
PRKD3-206ENST00000464552 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
PRKD3-206ENST00000464552 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
PRKD3-206ENST00000464552 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
PRKD3-206ENST00000464552 SLC27A5Q9Y2P5 690 aa10.24□□□□□ -0.77
PRKD3-206ENST00000464552 HOXA2O43364 376 aa10.23□□□□□ -0.77
PRKD3-206ENST00000464552 TLL1O43897 1013 aa10.22□□□□□ -0.77
PRKD3-206ENST00000464552 RGS20O76081 388 aa10.22□□□□□ -0.77
PRKD3-206ENST00000464552 ADH1BP00325 375 aa10.22□□□□□ -0.77
PRKD3-206ENST00000464552 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
PRKD3-206ENST00000464552 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
PRKD3-206ENST00000464552 THAP11Q96EK4 314 aa10.21□□□□□ -0.77
PRKD3-206ENST00000464552 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
PRKD3-206ENST00000464552 GGCXP38435 758 aa10.2□□□□□ -0.78
PRKD3-206ENST00000464552 Q3C1V9 767 aa10.2□□□□□ -0.78
PRKD3-206ENST00000464552 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
PRKD3-206ENST00000464552 SPSB2Q99619 263 aa10.2□□□□□ -0.78
PRKD3-206ENST00000464552 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
PRKD3-206ENST00000464552 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.19□□□□□ -0.78
PRKD3-206ENST00000464552 HLA-CQ95604 372 aa10.17□□□□□ -0.78
PRKD3-206ENST00000464552 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
PRKD3-206ENST00000464552 GJA5P36382 358 aa10.16□□□□□ -0.78
PRKD3-206ENST00000464552 TBC1D2Q9BYX2 928 aa10.16□□□□□ -0.78
PRKD3-206ENST00000464552 SLC6A16Q9GZN6 736 aa10.16□□□□□ -0.78
PRKD3-206ENST00000464552 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
PRKD3-206ENST00000464552 RNF19BQ6ZMZ0 732 aa10.15□□□□□ -0.78
PRKD3-206ENST00000464552 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
PRKD3-206ENST00000464552 S1PR4O95977 384 aa10.14□□□□□ -0.79
PRKD3-206ENST00000464552 FDX1P10109 184 aa10.14□□□□□ -0.79
PRKD3-206ENST00000464552 GUCA2AQ02747 115 aa10.14□□□□□ -0.79
PRKD3-206ENST00000464552 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
PRKD3-206ENST00000464552 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
PRKD3-206ENST00000464552 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
PRKD3-206ENST00000464552 NDUFV2P19404 249 aa10.12□□□□□ -0.79
PRKD3-206ENST00000464552 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
PRKD3-206ENST00000464552 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
PRKD3-206ENST00000464552 USB1Q9BQ65 265 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms