RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
USP25-207ENST00000464435 PPP4CP60510 307 aa10.67□□□□□ -0.7
USP25-207ENST00000464435 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.7
USP25-207ENST00000464435 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
USP25-207ENST00000464435 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
USP25-207ENST00000464435 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
USP25-207ENST00000464435 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
USP25-207ENST00000464435 METTL3Q86U44 580 aaKnown RBP10.63□□□□□ -0.71
USP25-207ENST00000464435 FECHP22830 423 aa10.61□□□□□ -0.71
USP25-207ENST00000464435 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
USP25-207ENST00000464435 MINK1Q8N4C8 1332 aaPredicted RBP10.6□□□□□ -0.71
USP25-207ENST00000464435 PRR14Q9BWN1 585 aa10.6□□□□□ -0.71
USP25-207ENST00000464435 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
USP25-207ENST00000464435 LCE2BO14633 110 aa10.58□□□□□ -0.72
USP25-207ENST00000464435 RNF40O75150 1001 aa10.57□□□□□ -0.72
USP25-207ENST00000464435 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
USP25-207ENST00000464435 IRF6O14896 467 aa10.56□□□□□ -0.72
USP25-207ENST00000464435 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
USP25-207ENST00000464435 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
USP25-207ENST00000464435 GFRA3O60609 400 aa10.53□□□□□ -0.72
USP25-207ENST00000464435 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
USP25-207ENST00000464435 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
USP25-207ENST00000464435 ZMYND10O75800 440 aa10.51□□□□□ -0.73
USP25-207ENST00000464435 APLP1P51693 650 aa10.51□□□□□ -0.73
USP25-207ENST00000464435 TJAP1Q5JTD0 557 aa10.51□□□□□ -0.73
USP25-207ENST00000464435 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
USP25-207ENST00000464435 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
USP25-207ENST00000464435 SULF1Q8IWU6 871 aa10.5□□□□□ -0.73
USP25-207ENST00000464435 IL21Q9HBE4 155 aa10.5□□□□□ -0.73
USP25-207ENST00000464435 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
USP25-207ENST00000464435 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
USP25-207ENST00000464435 PRKD2Q9BZL6 878 aa10.48□□□□□ -0.73
USP25-207ENST00000464435 SLC10A3P09131 477 aa10.47□□□□□ -0.73
USP25-207ENST00000464435 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
USP25-207ENST00000464435 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
USP25-207ENST00000464435 MTRQ99707 1265 aa10.47□□□□□ -0.73
USP25-207ENST00000464435 CFHP08603 1231 aa10.45□□□□□ -0.74
USP25-207ENST00000464435 PPP1R18Q6NYC8 613 aa10.45□□□□□ -0.74
USP25-207ENST00000464435 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
USP25-207ENST00000464435 NRG2O14511 850 aaPredicted RBP10.43□□□□□ -0.74
USP25-207ENST00000464435 CLCN1P35523 988 aa10.43□□□□□ -0.74
USP25-207ENST00000464435 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
USP25-207ENST00000464435 RDH13Q8NBN7 331 aa10.42□□□□□ -0.74
USP25-207ENST00000464435 ZNF516Q92618 1163 aa10.42□□□□□ -0.74
USP25-207ENST00000464435 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
USP25-207ENST00000464435 V9GY48 417 aaPredicted RBP10.4□□□□□ -0.74
USP25-207ENST00000464435 ZPR1O75312 459 aa10.39□□□□□ -0.75
USP25-207ENST00000464435 GCGRP47871 477 aa10.39□□□□□ -0.75
USP25-207ENST00000464435 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
USP25-207ENST00000464435 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
USP25-207ENST00000464435 NR1I2O75469 434 aa10.38□□□□□ -0.75
USP25-207ENST00000464435 TMUB1Q9BVT8 246 aa10.38□□□□□ -0.75
USP25-207ENST00000464435 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.38□□□□□ -0.75
USP25-207ENST00000464435 CD46P15529 392 aa10.37□□□□□ -0.75
USP25-207ENST00000464435 COPS2P61201 443 aa10.37□□□□□ -0.75
USP25-207ENST00000464435 AMHR2Q16671 573 aa10.37□□□□□ -0.75
USP25-207ENST00000464435 AK7Q96M32 723 aa10.37□□□□□ -0.75
USP25-207ENST00000464435 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
USP25-207ENST00000464435 BLOC1S3Q6QNY0 202 aa10.36□□□□□ -0.75
USP25-207ENST00000464435 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
USP25-207ENST00000464435 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
USP25-207ENST00000464435 GGCXP38435 758 aa10.34□□□□□ -0.75
USP25-207ENST00000464435 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
USP25-207ENST00000464435 PDZRN3Q9UPQ7 1066 aa10.34□□□□□ -0.75
USP25-207ENST00000464435 USP46P62068 366 aa10.33□□□□□ -0.76
USP25-207ENST00000464435 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
USP25-207ENST00000464435 TRIM66O15016 1216 aa10.31□□□□□ -0.76
USP25-207ENST00000464435 FUT2Q10981 343 aa10.31□□□□□ -0.76
USP25-207ENST00000464435 MORN1Q5T089 497 aa10.31□□□□□ -0.76
USP25-207ENST00000464435 ZNF787Q6DD87 383 aa10.31□□□□□ -0.76
USP25-207ENST00000464435 SALL2Q9Y467 1007 aaPredicted RBP10.31□□□□□ -0.76
USP25-207ENST00000464435 KDM4AO75164 1064 aa10.3□□□□□ -0.76
USP25-207ENST00000464435 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
USP25-207ENST00000464435 ADH1BP00325 375 aa10.28□□□□□ -0.76
USP25-207ENST00000464435 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
USP25-207ENST00000464435 PUS10Q3MIT2 529 aaKnown RBP10.27□□□□□ -0.77
USP25-207ENST00000464435 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
USP25-207ENST00000464435 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
USP25-207ENST00000464435 Q3C1V9 767 aa10.25□□□□□ -0.77
USP25-207ENST00000464435 GIGYF2Q6Y7W6 1299 aaKnown RBP10.25□□□□□ -0.77
USP25-207ENST00000464435 SLC24A3Q9HC58 644 aa10.25□□□□□ -0.77
USP25-207ENST00000464435 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
USP25-207ENST00000464435 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
USP25-207ENST00000464435 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
USP25-207ENST00000464435 THAP11Q96EK4 314 aa10.24□□□□□ -0.77
USP25-207ENST00000464435 SPSB2Q99619 263 aa10.24□□□□□ -0.77
USP25-207ENST00000464435 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
USP25-207ENST00000464435 ZNF775Q96BV0 537 aaPredicted RBP10.23□□□□□ -0.77
USP25-207ENST00000464435 TLL1O43897 1013 aa10.22□□□□□ -0.77
USP25-207ENST00000464435 PDE4DQ08499 809 aa10.22□□□□□ -0.77
USP25-207ENST00000464435 BRICD5Q6PL45 260 aa10.22□□□□□ -0.77
USP25-207ENST00000464435 TRIM67Q6ZTA4 783 aa10.22□□□□□ -0.77
USP25-207ENST00000464435 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
USP25-207ENST00000464435 HOXA2O43364 376 aa10.21□□□□□ -0.77
USP25-207ENST00000464435 ANKLE1Q8NAG6 615 aa10.21□□□□□ -0.77
USP25-207ENST00000464435 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
USP25-207ENST00000464435 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
USP25-207ENST00000464435 MSS51Q4VC12 460 aa10.19□□□□□ -0.78
USP25-207ENST00000464435 S1PR4O95977 384 aa10.18□□□□□ -0.78
USP25-207ENST00000464435 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms