RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
PTPN12-210ENST00000464313 ARIH1Q9Y4X5 557 aaPredicted RBP10.15□□□□□ -0.78
PTPN12-210ENST00000464313 FAM187AA6NFU0 413 aa10.13□□□□□ -0.79
PTPN12-210ENST00000464313 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
PTPN12-210ENST00000464313 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
PTPN12-210ENST00000464313 EMID1Q96A84 441 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-210ENST00000464313 HDGFP51858 240 aaKnown RBP10.12□□□□□ -0.79
PTPN12-210ENST00000464313 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
PTPN12-210ENST00000464313 ZPR1O75312 459 aa10.1□□□□□ -0.79
PTPN12-210ENST00000464313 WFS1O76024 890 aa10.1□□□□□ -0.79
PTPN12-210ENST00000464313 SWT1Q5T5J6 900 aaKnown RBP10.1□□□□□ -0.79
PTPN12-210ENST00000464313 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
PTPN12-210ENST00000464313 AAASQ9NRG9 546 aa10.1□□□□□ -0.79
PTPN12-210ENST00000464313 ST8SIA5O15466 376 aa10.09□□□□□ -0.79
PTPN12-210ENST00000464313 NPDC1Q9NQX5 325 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-210ENST00000464313 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
PTPN12-210ENST00000464313 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
PTPN12-210ENST00000464313 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
PTPN12-210ENST00000464313 LOC100996750A0A140TA64 210 aa10.07□□□□□ -0.8
PTPN12-210ENST00000464313 KRTAP4-6Q9BYQ5 205 aa10.07□□□□□ -0.8
PTPN12-210ENST00000464313 KDM2AQ9Y2K7 1162 aa10.07□□□□□ -0.8
PTPN12-210ENST00000464313 GDF9O60383 454 aa10.06□□□□□ -0.8
PTPN12-210ENST00000464313 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
PTPN12-210ENST00000464313 TNFRSF10AO00220 468 aa10.05□□□□□ -0.8
PTPN12-210ENST00000464313 INSM1Q01101 510 aaPredicted RBP10.05□□□□□ -0.8
PTPN12-210ENST00000464313 VSIG10Q8N0Z9 540 aa10.05□□□□□ -0.8
PTPN12-210ENST00000464313 WIPF1O43516 503 aa10.03□□□□□ -0.8
PTPN12-210ENST00000464313 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
PTPN12-210ENST00000464313 LIAT1Q6ZQX7 453 aa10.02□□□□□ -0.81
PTPN12-210ENST00000464313 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
PTPN12-210ENST00000464313 EYA1Q99502 592 aa10.01□□□□□ -0.81
PTPN12-210ENST00000464313 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
PTPN12-210ENST00000464313 MLLT3P42568 568 aaPredicted RBP9.99□□□□□ -0.81
PTPN12-210ENST00000464313 PPEF1O14829 653 aaPredicted RBP9.98□□□□□ -0.81
PTPN12-210ENST00000464313 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
PTPN12-210ENST00000464313 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
PTPN12-210ENST00000464313 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
PTPN12-210ENST00000464313 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
PTPN12-210ENST00000464313 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
PTPN12-210ENST00000464313 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
PTPN12-210ENST00000464313 PRR14Q9BWN1 585 aa9.95□□□□□ -0.82
PTPN12-210ENST00000464313 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
PTPN12-210ENST00000464313 TLL1O43897 1013 aa9.94□□□□□ -0.82
PTPN12-210ENST00000464313 S1PR4O95977 384 aa9.93□□□□□ -0.82
PTPN12-210ENST00000464313 PTGDRQ13258 359 aa9.91□□□□□ -0.82
PTPN12-210ENST00000464313 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
PTPN12-210ENST00000464313 DNAJB2P25686 324 aa9.9□□□□□ -0.82
PTPN12-210ENST00000464313 AVPP01185 164 aa9.89□□□□□ -0.83
PTPN12-210ENST00000464313 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
PTPN12-210ENST00000464313 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
PTPN12-210ENST00000464313 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
PTPN12-210ENST00000464313 ADGRG1Q9Y653 693 aa9.89□□□□□ -0.83
PTPN12-210ENST00000464313 AXIN1O15169 862 aa9.88□□□□□ -0.83
PTPN12-210ENST00000464313 FOXC1Q12948 553 aa9.88□□□□□ -0.83
PTPN12-210ENST00000464313 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
PTPN12-210ENST00000464313 LMOD2Q6P5Q4 547 aa9.87□□□□□ -0.83
PTPN12-210ENST00000464313 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
PTPN12-210ENST00000464313 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
PTPN12-210ENST00000464313 RCCD1A6NED2 376 aa9.86□□□□□ -0.83
PTPN12-210ENST00000464313 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
PTPN12-210ENST00000464313 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
PTPN12-210ENST00000464313 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
PTPN12-210ENST00000464313 CFHP08603 1231 aa9.85□□□□□ -0.83
PTPN12-210ENST00000464313 CTC1Q2NKJ3 1217 aa9.84□□□□□ -0.83
PTPN12-210ENST00000464313 KMT5BQ4FZB7 885 aa9.84□□□□□ -0.83
PTPN12-210ENST00000464313 TERTO14746 1132 aaKnown RBP9.83□□□□□ -0.84
PTPN12-210ENST00000464313 SLC10A3P09131 477 aa9.83□□□□□ -0.84
PTPN12-210ENST00000464313 FAM181BA6NEQ2 426 aa9.82□□□□□ -0.84
PTPN12-210ENST00000464313 ADH1BP00325 375 aa9.82□□□□□ -0.84
PTPN12-210ENST00000464313 TOR4AQ9NXH8 423 aa9.82□□□□□ -0.84
PTPN12-210ENST00000464313 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
PTPN12-210ENST00000464313 SLC6A16Q9GZN6 736 aa9.8□□□□□ -0.84
PTPN12-210ENST00000464313 CYP4X1Q8N118 509 aa9.79□□□□□ -0.84
PTPN12-210ENST00000464313 BCANQ96GW7 911 aa9.78□□□□□ -0.84
PTPN12-210ENST00000464313 NR1I2O75469 434 aa9.77□□□□□ -0.85
PTPN12-210ENST00000464313 FCHSD2O94868 740 aa9.77□□□□□ -0.85
PTPN12-210ENST00000464313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.76□□□□□ -0.85
PTPN12-210ENST00000464313 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
PTPN12-210ENST00000464313 SEMA3EO15041 775 aa9.75□□□□□ -0.85
PTPN12-210ENST00000464313 SNRPBP14678 240 aaKnown RBP9.75□□□□□ -0.85
PTPN12-210ENST00000464313 SUZ12Q15022 739 aaKnown RBP9.75□□□□□ -0.85
PTPN12-210ENST00000464313 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
PTPN12-210ENST00000464313 RPIAP49247 311 aa9.74□□□□□ -0.85
PTPN12-210ENST00000464313 SCUBE3Q8IX30 993 aa9.74□□□□□ -0.85
PTPN12-210ENST00000464313 ATP13A2Q9NQ11 1180 aa9.73□□□□□ -0.85
PTPN12-210ENST00000464313 CD2BP2O95400 341 aaKnown RBP9.71□□□□□ -0.86
PTPN12-210ENST00000464313 OATP04181 439 aa9.7□□□□□ -0.86
PTPN12-210ENST00000464313 TRIM47Q96LD4 638 aa9.7□□□□□ -0.86
PTPN12-210ENST00000464313 SPSB2Q99619 263 aa9.7□□□□□ -0.86
PTPN12-210ENST00000464313 SENP2Q9HC62 589 aa9.7□□□□□ -0.86
PTPN12-210ENST00000464313 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
PTPN12-210ENST00000464313 ZSCAN1Q8NBB4 408 aa9.69□□□□□ -0.86
PTPN12-210ENST00000464313 TTC24A2A3L6 582 aaPredicted RBP9.68□□□□□ -0.86
PTPN12-210ENST00000464313 FECHP22830 423 aa9.68□□□□□ -0.86
PTPN12-210ENST00000464313 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
PTPN12-210ENST00000464313 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
PTPN12-210ENST00000464313 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
PTPN12-210ENST00000464313 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
PTPN12-210ENST00000464313 NLRP7Q8WX94 980 aa9.67□□□□□ -0.86
PTPN12-210ENST00000464313 HIC1Q14526 733 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms