RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 KDM5AP29375 1690 aaKnown RBP10.45□□□□□ -0.74
EPHA4-210ENST00000463446 A2ML1A8K2U0 1454 aa10.45□□□□□ -0.74
EPHA4-210ENST00000463446 CFAP65Q6ZU64 1925 aaKnown RBP10.45□□□□□ -0.74
EPHA4-210ENST00000463446 SIGLEC1Q9BZZ2 1709 aa10.44□□□□□ -0.74
EPHA4-210ENST00000463446 TMEM2Q9UHN6 1383 aa10.44□□□□□ -0.74
EPHA4-210ENST00000463446 C3P01024 1663 aa10.44□□□□□ -0.74
EPHA4-210ENST00000463446 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
EPHA4-210ENST00000463446 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
EPHA4-210ENST00000463446 C14orf93Q9H972 538 aaKnown RBP10.43□□□□□ -0.74
EPHA4-210ENST00000463446 RIMS1Q86UR5 1692 aaKnown RBP10.42□□□□□ -0.74
EPHA4-210ENST00000463446 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
EPHA4-210ENST00000463446 TBX22Q9Y458 520 aa10.42□□□□□ -0.74
EPHA4-210ENST00000463446 PIK3C2BO00750 1634 aa10.42□□□□□ -0.74
EPHA4-210ENST00000463446 CARD11Q9BXL7 1154 aa10.41□□□□□ -0.74
EPHA4-210ENST00000463446 RIMS2Q9UQ26 1411 aa10.41□□□□□ -0.74
EPHA4-210ENST00000463446 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
EPHA4-210ENST00000463446 SYNMO15061 1565 aa10.4□□□□□ -0.74
EPHA4-210ENST00000463446 CDCA8Q53HL2 280 aa10.4□□□□□ -0.74
EPHA4-210ENST00000463446 SIRT1Q96EB6 747 aa10.4□□□□□ -0.74
EPHA4-210ENST00000463446 MYOM2P54296 1465 aa10.4□□□□□ -0.74
EPHA4-210ENST00000463446 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
EPHA4-210ENST00000463446 ADGRB3O60242 1522 aa10.39□□□□□ -0.75
EPHA4-210ENST00000463446 TMEM131LA2VDJ0 1609 aa10.39□□□□□ -0.75
EPHA4-210ENST00000463446 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
EPHA4-210ENST00000463446 PLEKHG1Q9ULL1 1385 aa10.38□□□□□ -0.75
EPHA4-210ENST00000463446 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
EPHA4-210ENST00000463446 PRAG1Q86YV5 1406 aa10.37□□□□□ -0.75
EPHA4-210ENST00000463446 SLIT1O75093 1534 aa10.37□□□□□ -0.75
EPHA4-210ENST00000463446 PIK3R4Q99570 1358 aa10.37□□□□□ -0.75
EPHA4-210ENST00000463446 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
EPHA4-210ENST00000463446 ARHGAP23Q9P227 1491 aa10.36□□□□□ -0.75
EPHA4-210ENST00000463446 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
EPHA4-210ENST00000463446 CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
EPHA4-210ENST00000463446 LTKP29376 864 aa10.35□□□□□ -0.75
EPHA4-210ENST00000463446 CFAP70Q5T0N1 1121 aa10.35□□□□□ -0.75
EPHA4-210ENST00000463446 MAPK8IP2Q13387 824 aaPredicted RBP10.34□□□□□ -0.75
EPHA4-210ENST00000463446 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
EPHA4-210ENST00000463446 NRXN1Q9ULB1 1477 aa10.34□□□□□ -0.75
EPHA4-210ENST00000463446 PIK3C2GO75747 1445 aa10.33□□□□□ -0.76
EPHA4-210ENST00000463446 UBR1Q8IWV7 1749 aa10.33□□□□□ -0.76
EPHA4-210ENST00000463446 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
EPHA4-210ENST00000463446 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
EPHA4-210ENST00000463446 POGKQ9P215 609 aa10.33□□□□□ -0.76
EPHA4-210ENST00000463446 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
EPHA4-210ENST00000463446 ABCC11Q96J66 1382 aa10.32□□□□□ -0.76
EPHA4-210ENST00000463446 ZNF316A6NFI3 1004 aaPredicted RBP10.32□□□□□ -0.76
EPHA4-210ENST00000463446 TMF1P82094 1093 aa10.32□□□□□ -0.76
EPHA4-210ENST00000463446 MYO3AQ8NEV4 1616 aa10.32□□□□□ -0.76
EPHA4-210ENST00000463446 NEXMIFQ5QGS0 1516 aa10.32□□□□□ -0.76
EPHA4-210ENST00000463446 ZNF142P52746 1687 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-210ENST00000463446 MED14O60244 1454 aa10.31□□□□□ -0.76
EPHA4-210ENST00000463446 RALGAPBQ86X10 1494 aa10.31□□□□□ -0.76
EPHA4-210ENST00000463446 KIAA1210Q9ULL0 1709 aa10.31□□□□□ -0.76
EPHA4-210ENST00000463446 NBPF1Q3BBV0 1214 aa10.31□□□□□ -0.76
EPHA4-210ENST00000463446 PPLO60437 1756 aa10.31□□□□□ -0.76
EPHA4-210ENST00000463446 LAMC1P11047 1609 aa10.3□□□□□ -0.76
EPHA4-210ENST00000463446 KCNA6P17658 529 aa10.3□□□□□ -0.76
EPHA4-210ENST00000463446 SLC26A8Q96RN1 970 aa10.3□□□□□ -0.76
EPHA4-210ENST00000463446 NPHP4O75161 1426 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-210ENST00000463446 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
EPHA4-210ENST00000463446 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
EPHA4-210ENST00000463446 TMEM132EQ6IEE7 984 aa10.29□□□□□ -0.76
EPHA4-210ENST00000463446 TRAK1Q9UPV9 953 aa10.29□□□□□ -0.76
EPHA4-210ENST00000463446 AMOTL2Q9Y2J4 779 aa10.29□□□□□ -0.76
EPHA4-210ENST00000463446 CENPJQ9HC77 1338 aaPredicted RBP10.29□□□□□ -0.76
EPHA4-210ENST00000463446 LRPPRCP42704 1394 aaKnown RBP10.28□□□□□ -0.76
EPHA4-210ENST00000463446 DIP2AQ14689 1571 aa10.28□□□□□ -0.76
EPHA4-210ENST00000463446 ST20-MTHFSA0A0A6YYL1 179 aa10.28□□□□□ -0.76
EPHA4-210ENST00000463446 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
EPHA4-210ENST00000463446 EVC2Q86UK5 1308 aa10.28□□□□□ -0.76
EPHA4-210ENST00000463446 USP47Q96K76 1375 aa10.27□□□□□ -0.76
EPHA4-210ENST00000463446 ALKQ9UM73 1620 aa10.27□□□□□ -0.77
EPHA4-210ENST00000463446 STK26Q9P289 416 aa10.27□□□□□ -0.77
EPHA4-210ENST00000463446 FAM135BQ49AJ0 1406 aa10.26□□□□□ -0.77
EPHA4-210ENST00000463446 YTHDC2Q9H6S0 1430 aaKnown RBP10.26□□□□□ -0.77
EPHA4-210ENST00000463446 HSPA2P54652 639 aa10.26□□□□□ -0.77
EPHA4-210ENST00000463446 IFT172Q9UG01 1749 aa10.26□□□□□ -0.77
EPHA4-210ENST00000463446 NCOA3Q9Y6Q9 1424 aa10.25□□□□□ -0.77
EPHA4-210ENST00000463446 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
EPHA4-210ENST00000463446 LMTK3Q96Q04 1460 aa10.24□□□□□ -0.77
EPHA4-210ENST00000463446 PROSER2Q86WR7 435 aaPredicted RBP10.24□□□□□ -0.77
EPHA4-210ENST00000463446 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
EPHA4-210ENST00000463446 TRPM1Q7Z4N2 1603 aa10.24□□□□□ -0.77
EPHA4-210ENST00000463446 ADAMTS13Q76LX8 1427 aa10.24□□□□□ -0.77
EPHA4-210ENST00000463446 MYO5BQ9ULV0 1848 aa10.23□□□□□ -0.77
EPHA4-210ENST00000463446 METP08581 1390 aa10.23□□□□□ -0.77
EPHA4-210ENST00000463446 TECPR2O15040 1411 aa10.23□□□□□ -0.77
EPHA4-210ENST00000463446 C14orf37Q86TY3 774 aa10.22□□□□□ -0.77
EPHA4-210ENST00000463446 C19orf44Q9H6X5 657 aa10.22□□□□□ -0.77
EPHA4-210ENST00000463446 DLC1Q96QB1 1528 aa10.22□□□□□ -0.77
EPHA4-210ENST00000463446 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
EPHA4-210ENST00000463446 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
EPHA4-210ENST00000463446 SOCS7O14512 581 aa10.2□□□□□ -0.78
EPHA4-210ENST00000463446 ATF3P18847 181 aa10.2□□□□□ -0.78
EPHA4-210ENST00000463446 IQGAP1P46940 1657 aa10.2□□□□□ -0.78
EPHA4-210ENST00000463446 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
EPHA4-210ENST00000463446 TESK2Q96S53 571 aa10.2□□□□□ -0.78
EPHA4-210ENST00000463446 NINLQ9Y2I6 1382 aa10.2□□□□□ -0.78
EPHA4-210ENST00000463446 ADGRB1O14514 1584 aa10.19□□□□□ -0.78
EPHA4-210ENST00000463446 PTCH1Q13635 1447 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms