RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CSPP1Q1MSJ5 1256 aa6.71□□□□□ -1.34
GPNMB-205ENST00000463011 PPP2R2DQ66LE6 453 aa6.71□□□□□ -1.34
GPNMB-205ENST00000463011 AEBP1Q8IUX7 1158 aa6.71□□□□□ -1.34
GPNMB-205ENST00000463011 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.34
GPNMB-205ENST00000463011 ADAM33Q9BZ11 813 aa6.71□□□□□ -1.34
GPNMB-205ENST00000463011 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.71□□□□□ -1.34
GPNMB-205ENST00000463011 RBM27Q9P2N5 1060 aaKnown RBP6.71□□□□□ -1.34
GPNMB-205ENST00000463011 MTMR14Q8NCE2 650 aa6.7□□□□□ -1.34
GPNMB-205ENST00000463011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.69□□□□□ -1.34
GPNMB-205ENST00000463011 RCCD1A6NED2 376 aa6.69□□□□□ -1.34
GPNMB-205ENST00000463011 SPTLC1O15269 473 aa6.69□□□□□ -1.34
GPNMB-205ENST00000463011 NUDT7P0C024 238 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 CD46P15529 392 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 ABL2P42684 1182 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 NUTM1Q86Y26 1132 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 KCTD17Q8N5Z5 321 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 KHSRPQ92945 711 aaKnown RBP eCLIP6.68□□□□□ -1.34
GPNMB-205ENST00000463011 FAM198AQ9UFP1 575 aa6.68□□□□□ -1.34
GPNMB-205ENST00000463011 MOXD2PA6NHM9 499 aa6.67□□□□□ -1.34
GPNMB-205ENST00000463011 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
GPNMB-205ENST00000463011 AP1G2O75843 785 aa6.67□□□□□ -1.34
GPNMB-205ENST00000463011 RSBN1LQ6PCB5 846 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-205ENST00000463011 RETREG2Q8NC44 543 aa6.67□□□□□ -1.34
GPNMB-205ENST00000463011 CALR3Q96L12 384 aaKnown RBP6.67□□□□□ -1.34
GPNMB-205ENST00000463011 EYA1Q99502 592 aa6.67□□□□□ -1.34
GPNMB-205ENST00000463011 POM121CA8CG34 1229 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 NDUFV2P19404 249 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 QPCTQ16769 361 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 TUSC1Q2TAM9 212 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 ARSIQ5FYB1 569 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 PRM3Q9NNZ6 103 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 PCDHB15Q9Y5E8 787 aa6.66□□□□□ -1.34
GPNMB-205ENST00000463011 ST18O60284 1047 aa6.65□□□□□ -1.34
GPNMB-205ENST00000463011 RTL5Q5HYW3 569 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-205ENST00000463011 SULF1Q8IWU6 871 aa6.65□□□□□ -1.34
GPNMB-205ENST00000463011 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
GPNMB-205ENST00000463011 NUTM2BA6NNL0 878 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-205ENST00000463011 NUTM2EB1AL46 878 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-205ENST00000463011 LILRB3O75022 631 aa6.64□□□□□ -1.35
GPNMB-205ENST00000463011 COL9A1P20849 921 aa6.64□□□□□ -1.35
GPNMB-205ENST00000463011 NUTM2DQ5VT03 806 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-205ENST00000463011 NUDT18Q6ZVK8 323 aa6.64□□□□□ -1.35
GPNMB-205ENST00000463011 NUTM2AQ8IVF1 878 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-205ENST00000463011 ZNF710Q8N1W2 664 aa6.64□□□□□ -1.35
GPNMB-205ENST00000463011 GLMNQ92990 594 aa6.64□□□□□ -1.35
GPNMB-205ENST00000463011 C3orf80F5H4A9 247 aa6.63□□□□□ -1.35
GPNMB-205ENST00000463011 IRF5Q13568 498 aa6.63□□□□□ -1.35
GPNMB-205ENST00000463011 CABLES1Q8TDN4 633 aa6.63□□□□□ -1.35
GPNMB-205ENST00000463011 TSKSQ9UJT2 592 aa6.63□□□□□ -1.35
GPNMB-205ENST00000463011 ACIN1Q9UKV3 1341 aaKnown RBP6.63□□□□□ -1.35
GPNMB-205ENST00000463011 PPP1R15AO75807 674 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-205ENST00000463011 DNAJB2P25686 324 aa6.62□□□□□ -1.35
GPNMB-205ENST00000463011 PNMA3Q9UL41 463 aa6.62□□□□□ -1.35
GPNMB-205ENST00000463011 USP17L8P0C7I0 530 aa6.61□□□□□ -1.35
GPNMB-205ENST00000463011 GJA5P36382 358 aa6.61□□□□□ -1.35
GPNMB-205ENST00000463011 RDH13Q8NBN7 331 aa6.61□□□□□ -1.35
GPNMB-205ENST00000463011 GZF1Q9H116 711 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-205ENST00000463011 SOCS7O14512 581 aa6.6□□□□□ -1.35
GPNMB-205ENST00000463011 DOK7Q18PE1 504 aa6.6□□□□□ -1.35
GPNMB-205ENST00000463011 HDGFL1Q5TGJ6 251 aa6.6□□□□□ -1.35
GPNMB-205ENST00000463011 TATDN2Q93075 761 aa6.6□□□□□ -1.35
GPNMB-205ENST00000463011 TMEM134Q9H6X4 195 aa6.6□□□□□ -1.35
GPNMB-205ENST00000463011 LHX6Q9UPM6 363 aa6.6□□□□□ -1.35
GPNMB-205ENST00000463011 NBPF26B4DH59 902 aa6.59□□□□□ -1.35
GPNMB-205ENST00000463011 SMAPO00193 183 aa6.59□□□□□ -1.35
GPNMB-205ENST00000463011 KDM4AO75164 1064 aa6.59□□□□□ -1.35
GPNMB-205ENST00000463011 HOXB3P14651 431 aaPredicted RBP6.59□□□□□ -1.35
GPNMB-205ENST00000463011 RFX1P22670 979 aa6.59□□□□□ -1.35
GPNMB-205ENST00000463011 PPP4R3BQ5MIZ7 849 aa6.59□□□□□ -1.35
GPNMB-205ENST00000463011 GPR153Q6NV75 609 aa6.59□□□□□ -1.35
GPNMB-205ENST00000463011 RIMBP2O15034 1052 aa6.58□□□□□ -1.36
GPNMB-205ENST00000463011 TMCO4Q5TGY1 634 aa6.58□□□□□ -1.36
GPNMB-205ENST00000463011 PRPF38BQ5VTL8 546 aaKnown RBP6.58□□□□□ -1.36
GPNMB-205ENST00000463011 PACS2Q86VP3 889 aa6.58□□□□□ -1.36
GPNMB-205ENST00000463011 GJD4Q96KN9 370 aaPredicted RBP6.58□□□□□ -1.36
GPNMB-205ENST00000463011 ZBTB3Q9H5J0 574 aa6.58□□□□□ -1.36
GPNMB-205ENST00000463011 BCL2L12Q9HB09 334 aa6.58□□□□□ -1.36
GPNMB-205ENST00000463011 TRIM6-TRIM34B2RNG4 842 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 PPP1R3GB7ZBB8 358 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 FDX1P10109 184 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 PTPREP23469 700 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 CTDSPL2Q05D32 466 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 ADAMTS19Q8TE59 1207 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 NDUFB9Q9Y6M9 179 aa6.57□□□□□ -1.36
GPNMB-205ENST00000463011 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-205ENST00000463011 GCGRP47871 477 aa6.56□□□□□ -1.36
GPNMB-205ENST00000463011 PDE4CQ08493 712 aa6.56□□□□□ -1.36
GPNMB-205ENST00000463011 ZSWIM6Q9HCJ5 1215 aa6.56□□□□□ -1.36
GPNMB-205ENST00000463011 HMX1Q9NP08 348 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-205ENST00000463011 HOXA2O43364 376 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 GUCA2AQ02747 115 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 WASHC4Q2M389 1173 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 RGS22Q8NE09 1264 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 PBXIP1Q96AQ6 731 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 PCDHGC3Q9UN70 934 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
GPNMB-205ENST00000463011 MFAP1P55081 439 aaKnown RBP6.54□□□□□ -1.36
GPNMB-205ENST00000463011 USP46P62068 366 aa6.54□□□□□ -1.36
GPNMB-205ENST00000463011 VAC14Q08AM6 782 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms