RNA–Protein interactions for RNA: ENST00000462855.1

ATP6V1A-203, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

TSL 4

Gene ATP6V1A, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-203ENST00000462855 PTPRTO14522 1441 aa17.89■□□□□ 0.46
ATP6V1A-203ENST00000462855 TMEM131LA2VDJ0 1609 aa17.88■□□□□ 0.45
ATP6V1A-203ENST00000462855 TMEM2Q9UHN6 1383 aa17.88■□□□□ 0.45
ATP6V1A-203ENST00000462855 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
ATP6V1A-203ENST00000462855 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
ATP6V1A-203ENST00000462855 SLIT1O75093 1534 aa17.85■□□□□ 0.45
ATP6V1A-203ENST00000462855 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
ATP6V1A-203ENST00000462855 SLC26A8Q96RN1 970 aa17.85■□□□□ 0.45
ATP6V1A-203ENST00000462855 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
ATP6V1A-203ENST00000462855 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
ATP6V1A-203ENST00000462855 BCANQ96GW7 911 aa17.84■□□□□ 0.45
ATP6V1A-203ENST00000462855 TRPM2O94759 1503 aa17.83■□□□□ 0.45
ATP6V1A-203ENST00000462855 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
ATP6V1A-203ENST00000462855 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
ATP6V1A-203ENST00000462855 IQGAP1P46940 1657 aa17.82■□□□□ 0.44
ATP6V1A-203ENST00000462855 ZFYVE9O95405 1425 aa17.81■□□□□ 0.44
ATP6V1A-203ENST00000462855 RGL3Q3MIN7 710 aa17.81■□□□□ 0.44
ATP6V1A-203ENST00000462855 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
ATP6V1A-203ENST00000462855 MED14O60244 1454 aa17.8■□□□□ 0.44
ATP6V1A-203ENST00000462855 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
ATP6V1A-203ENST00000462855 CERKQ8TCT0 537 aa17.79■□□□□ 0.44
ATP6V1A-203ENST00000462855 KDM5AP29375 1690 aaKnown RBP17.78■□□□□ 0.44
ATP6V1A-203ENST00000462855 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
ATP6V1A-203ENST00000462855 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
ATP6V1A-203ENST00000462855 KIF1BO60333 1816 aa17.77■□□□□ 0.43
ATP6V1A-203ENST00000462855 CCDC144AA2RUR9 1427 aa17.74■□□□□ 0.43
ATP6V1A-203ENST00000462855 HRCP23327 699 aa17.73■□□□□ 0.43
ATP6V1A-203ENST00000462855 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
ATP6V1A-203ENST00000462855 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
ATP6V1A-203ENST00000462855 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
ATP6V1A-203ENST00000462855 ANKRD30BQ9BXX2 1392 aa17.72■□□□□ 0.43
ATP6V1A-203ENST00000462855 PLEKHG1Q9ULL1 1385 aa17.71■□□□□ 0.43
ATP6V1A-203ENST00000462855 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATP6V1A-203ENST00000462855 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
ATP6V1A-203ENST00000462855 SPATA31E1Q6ZUB1 1445 aa17.69■□□□□ 0.42
ATP6V1A-203ENST00000462855 ADGRF5Q8IZF2 1346 aa17.69■□□□□ 0.42
ATP6V1A-203ENST00000462855 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
ATP6V1A-203ENST00000462855 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
ATP6V1A-203ENST00000462855 HDGFP51858 240 aaKnown RBP17.67■□□□□ 0.42
ATP6V1A-203ENST00000462855 PPLO60437 1756 aa17.66■□□□□ 0.42
ATP6V1A-203ENST00000462855 PTPRUQ92729 1446 aa17.65■□□□□ 0.42
ATP6V1A-203ENST00000462855 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
ATP6V1A-203ENST00000462855 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
ATP6V1A-203ENST00000462855 METP08581 1390 aa17.64■□□□□ 0.41
ATP6V1A-203ENST00000462855 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
ATP6V1A-203ENST00000462855 KCNA6P17658 529 aa17.63■□□□□ 0.41
ATP6V1A-203ENST00000462855 TBX22Q9Y458 520 aa17.63■□□□□ 0.41
ATP6V1A-203ENST00000462855 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
ATP6V1A-203ENST00000462855 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
ATP6V1A-203ENST00000462855 PROSER2Q86WR7 435 aaPredicted RBP17.62■□□□□ 0.41
ATP6V1A-203ENST00000462855 UBAP1LF5GYI3 381 aa17.61■□□□□ 0.41
ATP6V1A-203ENST00000462855 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
ATP6V1A-203ENST00000462855 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
ATP6V1A-203ENST00000462855 VGFO15240 615 aaPredicted RBP17.6■□□□□ 0.41
ATP6V1A-203ENST00000462855 AMOTL2Q9Y2J4 779 aa17.6■□□□□ 0.41
ATP6V1A-203ENST00000462855 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
ATP6V1A-203ENST00000462855 CHD2O14647 1828 aaKnown RBP17.6■□□□□ 0.41
ATP6V1A-203ENST00000462855 CPS1P31327 1500 aa17.59■□□□□ 0.41
ATP6V1A-203ENST00000462855 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
ATP6V1A-203ENST00000462855 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
ATP6V1A-203ENST00000462855 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
ATP6V1A-203ENST00000462855 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
ATP6V1A-203ENST00000462855 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
ATP6V1A-203ENST00000462855 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
ATP6V1A-203ENST00000462855 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
ATP6V1A-203ENST00000462855 STK26Q9P289 416 aa17.57■□□□□ 0.4
ATP6V1A-203ENST00000462855 ALKQ9UM73 1620 aa17.57■□□□□ 0.4
ATP6V1A-203ENST00000462855 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
ATP6V1A-203ENST00000462855 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
ATP6V1A-203ENST00000462855 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
ATP6V1A-203ENST00000462855 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
ATP6V1A-203ENST00000462855 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
ATP6V1A-203ENST00000462855 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
ATP6V1A-203ENST00000462855 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
ATP6V1A-203ENST00000462855 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
ATP6V1A-203ENST00000462855 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
ATP6V1A-203ENST00000462855 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
ATP6V1A-203ENST00000462855 C14orf93Q9H972 538 aaKnown RBP17.48■□□□□ 0.39
ATP6V1A-203ENST00000462855 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
ATP6V1A-203ENST00000462855 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
ATP6V1A-203ENST00000462855 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
ATP6V1A-203ENST00000462855 PIK3R4Q99570 1358 aa17.47■□□□□ 0.39
ATP6V1A-203ENST00000462855 MYOM2P54296 1465 aa17.47■□□□□ 0.39
ATP6V1A-203ENST00000462855 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
ATP6V1A-203ENST00000462855 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
ATP6V1A-203ENST00000462855 TOM1O60784 492 aa17.45■□□□□ 0.38
ATP6V1A-203ENST00000462855 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
ATP6V1A-203ENST00000462855 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
ATP6V1A-203ENST00000462855 POTEHQ6S545 545 aa17.43■□□□□ 0.38
ATP6V1A-203ENST00000462855 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.42■□□□□ 0.38
ATP6V1A-203ENST00000462855 HSPA1LP34931 641 aa17.42■□□□□ 0.38
ATP6V1A-203ENST00000462855 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
ATP6V1A-203ENST00000462855 MSH6P52701 1360 aa17.41■□□□□ 0.38
ATP6V1A-203ENST00000462855 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
ATP6V1A-203ENST00000462855 NUTM2FA1L443 756 aa17.41■□□□□ 0.38
ATP6V1A-203ENST00000462855 LRPPRCP42704 1394 aaKnown RBP17.4■□□□□ 0.38
ATP6V1A-203ENST00000462855 NBPF8Q3BBV2 869 aa17.4■□□□□ 0.38
ATP6V1A-203ENST00000462855 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
ATP6V1A-203ENST00000462855 ADGRB1O14514 1584 aa17.38■□□□□ 0.37
ATP6V1A-203ENST00000462855 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms