RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 NRXN1Q9ULB1 1477 aa21.6■■□□□ 1.05
PCCB-204ENST00000462637 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
PCCB-204ENST00000462637 MROH2AA6NES4 1674 aa21.59■■□□□ 1.05
PCCB-204ENST00000462637 PIK3C2BO00750 1634 aa21.59■■□□□ 1.05
PCCB-204ENST00000462637 IFT172Q9UG01 1749 aa21.58■■□□□ 1.05
PCCB-204ENST00000462637 CHGAP10645 457 aaKnown RBP21.58■■□□□ 1.05
PCCB-204ENST00000462637 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
PCCB-204ENST00000462637 SLC52A1Q9NWF4 448 aa21.58■■□□□ 1.05
PCCB-204ENST00000462637 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.05
PCCB-204ENST00000462637 SYNMO15061 1565 aa21.58■■□□□ 1.05
PCCB-204ENST00000462637 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
PCCB-204ENST00000462637 EIF3AQ14152 1382 aaKnown RBP21.56■■□□□ 1.04
PCCB-204ENST00000462637 IQGAP1P46940 1657 aa21.55■■□□□ 1.04
PCCB-204ENST00000462637 IDI1Q13907 227 aa21.55■■□□□ 1.04
PCCB-204ENST00000462637 TESK2Q96S53 571 aa21.55■■□□□ 1.04
PCCB-204ENST00000462637 PRKRIP1Q9H875 184 aaPredicted RBP21.55■■□□□ 1.04
PCCB-204ENST00000462637 ADGRF5Q8IZF2 1346 aa21.54■■□□□ 1.04
PCCB-204ENST00000462637 CFAP65Q6ZU64 1925 aaKnown RBP21.54■■□□□ 1.04
PCCB-204ENST00000462637 TMF1P82094 1093 aa21.54■■□□□ 1.04
PCCB-204ENST00000462637 ERVK-7P63135 1459 aa21.53■■□□□ 1.04
PCCB-204ENST00000462637 PREX1Q8TCU6 1659 aa21.52■■□□□ 1.04
PCCB-204ENST00000462637 PLPPR3Q6T4P5 718 aa21.52■■□□□ 1.03
PCCB-204ENST00000462637 SLC24A1O60721 1099 aa21.5■■□□□ 1.03
PCCB-204ENST00000462637 PPLO60437 1756 aa21.5■■□□□ 1.03
PCCB-204ENST00000462637 CFAP70Q5T0N1 1121 aa21.49■■□□□ 1.03
PCCB-204ENST00000462637 PIK3C2GO75747 1445 aa21.49■■□□□ 1.03
PCCB-204ENST00000462637 SETBP1Q9Y6X0 1596 aa21.49■■□□□ 1.03
PCCB-204ENST00000462637 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
PCCB-204ENST00000462637 VGFO15240 615 aaPredicted RBP21.48■■□□□ 1.03
PCCB-204ENST00000462637 SPATA31D1Q6ZQQ2 1576 aa21.47■■□□□ 1.03
PCCB-204ENST00000462637 CDCA8Q53HL2 280 aa21.47■■□□□ 1.03
PCCB-204ENST00000462637 NEXMIFQ5QGS0 1516 aa21.46■■□□□ 1.03
PCCB-204ENST00000462637 FER1L4A9Z1Z3 1794 aa21.45■■□□□ 1.03
PCCB-204ENST00000462637 ZFYVE9O95405 1425 aa21.45■■□□□ 1.02
PCCB-204ENST00000462637 ADAMTSL3P82987 1691 aa21.45■■□□□ 1.02
PCCB-204ENST00000462637 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
PCCB-204ENST00000462637 TNRQ92752 1358 aa21.45■■□□□ 1.02
PCCB-204ENST00000462637 C14orf93Q9H972 538 aaKnown RBP21.45■■□□□ 1.02
PCCB-204ENST00000462637 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
PCCB-204ENST00000462637 TMEM131LA2VDJ0 1609 aa21.42■■□□□ 1.02
PCCB-204ENST00000462637 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
PCCB-204ENST00000462637 C3P01024 1663 aa21.4■■□□□ 1.02
PCCB-204ENST00000462637 RIMS1Q86UR5 1692 aaKnown RBP21.39■■□□□ 1.01
PCCB-204ENST00000462637 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
PCCB-204ENST00000462637 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
PCCB-204ENST00000462637 ADGRB1O14514 1584 aa21.38■■□□□ 1.01
PCCB-204ENST00000462637 RALBP1Q15311 655 aa21.38■■□□□ 1.01
PCCB-204ENST00000462637 MYO3AQ8NEV4 1616 aa21.37■■□□□ 1.01
PCCB-204ENST00000462637 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
PCCB-204ENST00000462637 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
PCCB-204ENST00000462637 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
PCCB-204ENST00000462637 CENPJQ9HC77 1338 aaPredicted RBP21.34■■□□□ 1.01
PCCB-204ENST00000462637 PTPRMP28827 1452 aa21.33■■□□□ 1.01
PCCB-204ENST00000462637 A2ML1A8K2U0 1454 aa21.33■■□□□ 1
PCCB-204ENST00000462637 PER1O15534 1290 aaPredicted RBP21.32■■□□□ 1
PCCB-204ENST00000462637 NLRP1Q9C000 1473 aa21.32■■□□□ 1
PCCB-204ENST00000462637 CCDC184Q52MB2 194 aa21.32■■□□□ 1
PCCB-204ENST00000462637 PANK3Q9H999 370 aa21.32■■□□□ 1
PCCB-204ENST00000462637 MYBBP1AQ9BQG0 1328 aaKnown RBP21.3■■□□□ 1
PCCB-204ENST00000462637 KDM5AP29375 1690 aaKnown RBP21.29■■□□□ 1
PCCB-204ENST00000462637 TRAK1Q9UPV9 953 aa21.29■■□□□ 1
PCCB-204ENST00000462637 PARD3Q8TEW0 1356 aa21.28■■□□□ 1
PCCB-204ENST00000462637 TMEM132EQ6IEE7 984 aa21.27■■□□□ 1
PCCB-204ENST00000462637 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
PCCB-204ENST00000462637 MYO5BQ9ULV0 1848 aa21.26■□□□□ 0.99
PCCB-204ENST00000462637 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
PCCB-204ENST00000462637 CNGB1Q14028 1251 aaPredicted RBP21.26■□□□□ 0.99
PCCB-204ENST00000462637 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
PCCB-204ENST00000462637 HDGFP51858 240 aaKnown RBP21.25■□□□□ 0.99
PCCB-204ENST00000462637 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
PCCB-204ENST00000462637 TMC1Q8TDI8 760 aa21.24■□□□□ 0.99
PCCB-204ENST00000462637 RIMS2Q9UQ26 1411 aa21.24■□□□□ 0.99
PCCB-204ENST00000462637 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.24■□□□□ 0.99
PCCB-204ENST00000462637 KNSTRNQ9Y448 316 aa21.24■□□□□ 0.99
PCCB-204ENST00000462637 TMEM2Q9UHN6 1383 aa21.23■□□□□ 0.99
PCCB-204ENST00000462637 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
PCCB-204ENST00000462637 QRICH2Q9H0J4 1663 aa21.22■□□□□ 0.99
PCCB-204ENST00000462637 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
PCCB-204ENST00000462637 PUS7Q96PZ0 661 aaKnown RBP21.21■□□□□ 0.99
PCCB-204ENST00000462637 ASXL1Q8IXJ9 1541 aa21.21■□□□□ 0.99
PCCB-204ENST00000462637 MYOM1P52179 1685 aa21.21■□□□□ 0.99
PCCB-204ENST00000462637 UBR1Q8IWV7 1749 aa21.2■□□□□ 0.98
PCCB-204ENST00000462637 ALKQ9UM73 1620 aa21.2■□□□□ 0.98
PCCB-204ENST00000462637 NPC1L1Q9UHC9 1359 aa21.19■□□□□ 0.98
PCCB-204ENST00000462637 LTKP29376 864 aa21.19■□□□□ 0.98
PCCB-204ENST00000462637 TXNDC2Q86VQ3 553 aa21.19■□□□□ 0.98
PCCB-204ENST00000462637 ARHGEF28Q8N1W1 1705 aaKnown RBP21.19■□□□□ 0.98
PCCB-204ENST00000462637 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
PCCB-204ENST00000462637 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
PCCB-204ENST00000462637 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
PCCB-204ENST00000462637 PNISRQ8TF01 805 aaKnown RBP21.17■□□□□ 0.98
PCCB-204ENST00000462637 EID1Q9Y6B2 187 aa21.17■□□□□ 0.98
PCCB-204ENST00000462637 SETD1BQ9UPS6 1966 aaKnown RBP21.17■□□□□ 0.98
PCCB-204ENST00000462637 CEP170BQ9Y4F5 1589 aaPredicted RBP21.16■□□□□ 0.98
PCCB-204ENST00000462637 AMER1Q5JTC6 1135 aaPredicted RBP21.15■□□□□ 0.98
PCCB-204ENST00000462637 ZBED9Q6R2W3 1325 aa21.14■□□□□ 0.97
PCCB-204ENST00000462637 ARHGAP23Q9P227 1491 aa21.14■□□□□ 0.97
PCCB-204ENST00000462637 STK26Q9P289 416 aa21.13■□□□□ 0.97
PCCB-204ENST00000462637 BCANQ96GW7 911 aa21.12■□□□□ 0.97
PCCB-204ENST00000462637 SLIT1O75093 1534 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms