RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 MYO5BQ9ULV0 1848 aa28.17■■■□□ 2.1
PTPN18-207ENST00000462321 ROCK2O75116 1388 aaKnown RBP28.17■■■□□ 2.1
PTPN18-207ENST00000462321 ADGRF5Q8IZF2 1346 aa28.17■■■□□ 2.1
PTPN18-207ENST00000462321 GPRASP1Q5JY77 1395 aa28.16■■■□□ 2.1
PTPN18-207ENST00000462321 ZFYVE9O95405 1425 aa28.16■■■□□ 2.1
PTPN18-207ENST00000462321 VGFO15240 615 aaPredicted RBP28.14■■■□□ 2.1
PTPN18-207ENST00000462321 EIF4G2P78344 907 aaKnown RBP eCLIP28.14■■■□□ 2.1
PTPN18-207ENST00000462321 PIK3C2GO75747 1445 aa28.13■■■□□ 2.09
PTPN18-207ENST00000462321 PLPPR3Q6T4P5 718 aa28.13■■■□□ 2.09
PTPN18-207ENST00000462321 LAMC1P11047 1609 aa28.12■■■□□ 2.09
PTPN18-207ENST00000462321 KIAA1210Q9ULL0 1709 aa28.12■■■□□ 2.09
PTPN18-207ENST00000462321 CARD11Q9BXL7 1154 aa28.12■■■□□ 2.09
PTPN18-207ENST00000462321 MYO3AQ8NEV4 1616 aa28.12■■■□□ 2.09
PTPN18-207ENST00000462321 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
PTPN18-207ENST00000462321 PTPRMP28827 1452 aa28.09■■■□□ 2.09
PTPN18-207ENST00000462321 HSPA5P11021 654 aaKnown RBP28.09■■■□□ 2.09
PTPN18-207ENST00000462321 NBPF1Q3BBV0 1214 aa28.09■■■□□ 2.09
PTPN18-207ENST00000462321 USP47Q96K76 1375 aa28.09■■■□□ 2.09
PTPN18-207ENST00000462321 RIMS2Q9UQ26 1411 aa28.09■■■□□ 2.09
PTPN18-207ENST00000462321 NUTM2DQ5VT03 806 aaPredicted RBP28.04■■■□□ 2.08
PTPN18-207ENST00000462321 TMEM2Q9UHN6 1383 aa28.04■■■□□ 2.08
PTPN18-207ENST00000462321 CFAP70Q5T0N1 1121 aa28.03■■■□□ 2.08
PTPN18-207ENST00000462321 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
PTPN18-207ENST00000462321 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
PTPN18-207ENST00000462321 HIRIP3Q9BW71 556 aaPredicted RBP28.02■■■□□ 2.08
PTPN18-207ENST00000462321 C14orf93Q9H972 538 aaKnown RBP28.02■■■□□ 2.08
PTPN18-207ENST00000462321 SETBP1Q9Y6X0 1596 aa28.01■■■□□ 2.08
PTPN18-207ENST00000462321 HDGFP51858 240 aaKnown RBP28.01■■■□□ 2.07
PTPN18-207ENST00000462321 ZNF142P52746 1687 aaPredicted RBP27.99■■■□□ 2.07
PTPN18-207ENST00000462321 SLIT1O75093 1534 aa27.99■■■□□ 2.07
PTPN18-207ENST00000462321 ARHGAP23Q9P227 1491 aa27.98■■■□□ 2.07
PTPN18-207ENST00000462321 SCAF11Q99590 1463 aaKnown RBP27.97■■■□□ 2.07
PTPN18-207ENST00000462321 THEMISQ8N1K5 641 aaPredicted RBP27.96■■■□□ 2.07
PTPN18-207ENST00000462321 ADGRB1O14514 1584 aa27.95■■■□□ 2.07
PTPN18-207ENST00000462321 IQGAP1P46940 1657 aa27.95■■■□□ 2.06
PTPN18-207ENST00000462321 SETD1BQ9UPS6 1966 aaKnown RBP27.94■■■□□ 2.06
PTPN18-207ENST00000462321 ST20-MTHFSA0A0A6YYL1 179 aa27.89■■■□□ 2.06
PTPN18-207ENST00000462321 EIF3AQ14152 1382 aaKnown RBP27.89■■■□□ 2.06
PTPN18-207ENST00000462321 ALKQ9UM73 1620 aa27.89■■■□□ 2.06
PTPN18-207ENST00000462321 KDM4FA0A1W2PPD8 638 aa27.89■■■□□ 2.05
PTPN18-207ENST00000462321 EID1Q9Y6B2 187 aa27.89■■■□□ 2.05
PTPN18-207ENST00000462321 PLEKHG1Q9ULL1 1385 aa27.87■■■□□ 2.05
PTPN18-207ENST00000462321 NRXN3Q9Y4C0 1643 aa27.87■■■□□ 2.05
PTPN18-207ENST00000462321 ASXL1Q8IXJ9 1541 aa27.87■■■□□ 2.05
PTPN18-207ENST00000462321 LTKP29376 864 aa27.87■■■□□ 2.05
PTPN18-207ENST00000462321 TXNDC2Q86VQ3 553 aa27.86■■■□□ 2.05
PTPN18-207ENST00000462321 TMEM132EQ6IEE7 984 aa27.84■■■□□ 2.05
PTPN18-207ENST00000462321 SETD1AO15047 1707 aaKnown RBP27.82■■■□□ 2.04
PTPN18-207ENST00000462321 DIEXFQ68CQ4 756 aaKnown RBP27.81■■■□□ 2.04
PTPN18-207ENST00000462321 SENP3Q9H4L4 574 aaPredicted RBP27.81■■■□□ 2.04
PTPN18-207ENST00000462321 WASHC2AQ641Q2 1341 aa27.81■■■□□ 2.04
PTPN18-207ENST00000462321 CCDC7Q96M83 1385 aa27.79■■■□□ 2.04
PTPN18-207ENST00000462321 TESK2Q96S53 571 aa27.79■■■□□ 2.04
PTPN18-207ENST00000462321 C11orf95C9JLR9 678 aaPredicted RBP27.78■■■□□ 2.04
PTPN18-207ENST00000462321 ADAMTS13Q76LX8 1427 aa27.78■■■□□ 2.04
PTPN18-207ENST00000462321 POLR1AO95602 1720 aaPredicted RBP27.78■■■□□ 2.04
PTPN18-207ENST00000462321 YTHDC2Q9H6S0 1430 aaKnown RBP27.78■■■□□ 2.04
PTPN18-207ENST00000462321 KIF7Q2M1P5 1343 aa27.77■■■□□ 2.04
PTPN18-207ENST00000462321 TRAK1Q9UPV9 953 aa27.76■■■□□ 2.03
PTPN18-207ENST00000462321 BCANQ96GW7 911 aa27.75■■■□□ 2.03
PTPN18-207ENST00000462321 MED14O60244 1454 aa27.75■■■□□ 2.03
PTPN18-207ENST00000462321 ANKLE2Q86XL3 938 aa27.74■■■□□ 2.03
PTPN18-207ENST00000462321 DIP2AQ14689 1571 aa27.73■■■□□ 2.03
PTPN18-207ENST00000462321 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
PTPN18-207ENST00000462321 SBNO2Q9Y2G9 1366 aa27.73■■■□□ 2.03
PTPN18-207ENST00000462321 ARHGEF28Q8N1W1 1705 aaKnown RBP27.73■■■□□ 2.03
PTPN18-207ENST00000462321 CENPJQ9HC77 1338 aaPredicted RBP27.72■■■□□ 2.03
PTPN18-207ENST00000462321 METP08581 1390 aa27.72■■■□□ 2.03
PTPN18-207ENST00000462321 SLC24A1O60721 1099 aa27.71■■■□□ 2.03
PTPN18-207ENST00000462321 TMF1P82094 1093 aa27.7■■■□□ 2.03
PTPN18-207ENST00000462321 DLC1Q96QB1 1528 aa27.7■■■□□ 2.02
PTPN18-207ENST00000462321 DDX10Q13206 875 aaKnown RBP27.7■■■□□ 2.02
PTPN18-207ENST00000462321 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
PTPN18-207ENST00000462321 STK26Q9P289 416 aa27.69■■■□□ 2.02
PTPN18-207ENST00000462321 DISP3Q9P2K9 1392 aa27.68■■■□□ 2.02
PTPN18-207ENST00000462321 TBX22Q9Y458 520 aa27.68■■■□□ 2.02
PTPN18-207ENST00000462321 TECPR2O15040 1411 aa27.66■■■□□ 2.02
PTPN18-207ENST00000462321 QRICH2Q9H0J4 1663 aa27.65■■■□□ 2.02
PTPN18-207ENST00000462321 KNDC1Q76NI1 1749 aa27.64■■■□□ 2.02
PTPN18-207ENST00000462321 SLC26A8Q96RN1 970 aa27.64■■■□□ 2.02
PTPN18-207ENST00000462321 NPHP4O75161 1426 aaPredicted RBP27.62■■■□□ 2.01
PTPN18-207ENST00000462321 CDCA8Q53HL2 280 aa27.61■■■□□ 2.01
PTPN18-207ENST00000462321 CPS1P31327 1500 aa27.61■■■□□ 2.01
PTPN18-207ENST00000462321 LMTK3Q96Q04 1460 aa27.6■■■□□ 2.01
PTPN18-207ENST00000462321 PIK3R4Q99570 1358 aa27.6■■■□□ 2.01
PTPN18-207ENST00000462321 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
PTPN18-207ENST00000462321 SIRT1Q96EB6 747 aa27.59■■■□□ 2.01
PTPN18-207ENST00000462321 POLR3GLQ9BT43 218 aa27.59■■■□□ 2.01
PTPN18-207ENST00000462321 FAM135BQ49AJ0 1406 aa27.59■■■□□ 2.01
PTPN18-207ENST00000462321 POGKQ9P215 609 aa27.58■■■□□ 2.01
PTPN18-207ENST00000462321 PTPRUQ92729 1446 aa27.57■■■□□ 2
PTPN18-207ENST00000462321 NCKAP5LQ9HCH0 1330 aa27.55■■■□□ 2
PTPN18-207ENST00000462321 PTCH1Q13635 1447 aa27.53■■■□□ 2
PTPN18-207ENST00000462321 SAFB2Q14151 953 aaKnown RBP eCLIP27.53■■■□□ 2
PTPN18-207ENST00000462321 XRN1Q8IZH2 1706 aaKnown RBP27.52■■■□□ 2
PTPN18-207ENST00000462321 ROBO2Q9HCK4 1378 aa27.52■■■□□ 2
PTPN18-207ENST00000462321 TULP4Q9NRJ4 1543 aa27.52■■■□□ 2
PTPN18-207ENST00000462321 PLEKHH1Q9ULM0 1364 aa27.52■■■□□ 2
PTPN18-207ENST00000462321 EVC2Q86UK5 1308 aa27.51■■□□□ 1.99
PTPN18-207ENST00000462321 AMOTL2Q9Y2J4 779 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms