RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TK2O00142 265 aa9.42□□□□□ -0.9
COPS3-204ENST00000462236 DNAJB2P25686 324 aa9.42□□□□□ -0.9
COPS3-204ENST00000462236 PSEN2P49810 448 aa9.42□□□□□ -0.9
COPS3-204ENST00000462236 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
COPS3-204ENST00000462236 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
COPS3-204ENST00000462236 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
COPS3-204ENST00000462236 NUDT18Q6ZVK8 323 aa9.42□□□□□ -0.9
COPS3-204ENST00000462236 PROX2Q3B8N5 592 aa9.41□□□□□ -0.9
COPS3-204ENST00000462236 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
COPS3-204ENST00000462236 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
COPS3-204ENST00000462236 RCCD1A6NED2 376 aa9.4□□□□□ -0.9
COPS3-204ENST00000462236 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
COPS3-204ENST00000462236 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
COPS3-204ENST00000462236 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
COPS3-204ENST00000462236 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
COPS3-204ENST00000462236 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
COPS3-204ENST00000462236 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
COPS3-204ENST00000462236 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
COPS3-204ENST00000462236 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
COPS3-204ENST00000462236 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
COPS3-204ENST00000462236 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
COPS3-204ENST00000462236 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
COPS3-204ENST00000462236 SULF1Q8IWU6 871 aa9.38□□□□□ -0.91
COPS3-204ENST00000462236 IL27Q8NEV9 243 aa9.38□□□□□ -0.91
COPS3-204ENST00000462236 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
COPS3-204ENST00000462236 VPS9D1Q9Y2B5 631 aa9.38□□□□□ -0.91
COPS3-204ENST00000462236 MS4A1P11836 297 aa9.37□□□□□ -0.91
COPS3-204ENST00000462236 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
COPS3-204ENST00000462236 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
COPS3-204ENST00000462236 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
COPS3-204ENST00000462236 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
COPS3-204ENST00000462236 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
COPS3-204ENST00000462236 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
COPS3-204ENST00000462236 C3orf80F5H4A9 247 aa9.35□□□□□ -0.91
COPS3-204ENST00000462236 PRDM2Q13029 1718 aa9.35□□□□□ -0.91
COPS3-204ENST00000462236 FAM98CQ17RN3 349 aaKnown RBP9.35□□□□□ -0.91
COPS3-204ENST00000462236 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
COPS3-204ENST00000462236 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
COPS3-204ENST00000462236 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
COPS3-204ENST00000462236 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
COPS3-204ENST00000462236 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
COPS3-204ENST00000462236 WIZO95785 1651 aa9.34□□□□□ -0.91
COPS3-204ENST00000462236 SLC4A3P48751 1232 aa9.33□□□□□ -0.92
COPS3-204ENST00000462236 HDGFP51858 240 aaKnown RBP9.33□□□□□ -0.92
COPS3-204ENST00000462236 RSPH4AQ5TD94 716 aa9.33□□□□□ -0.92
COPS3-204ENST00000462236 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
COPS3-204ENST00000462236 FANCD2Q9BXW9 1451 aa9.32□□□□□ -0.92
COPS3-204ENST00000462236 SMAPO00193 183 aa9.31□□□□□ -0.92
COPS3-204ENST00000462236 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
COPS3-204ENST00000462236 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
COPS3-204ENST00000462236 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
COPS3-204ENST00000462236 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
COPS3-204ENST00000462236 CFTRP13569 1480 aa9.3□□□□□ -0.92
COPS3-204ENST00000462236 CD46P15529 392 aa9.3□□□□□ -0.92
COPS3-204ENST00000462236 SH3D19Q5HYK7 790 aa9.3□□□□□ -0.92
COPS3-204ENST00000462236 ARHGEF11O15085 1522 aa9.3□□□□□ -0.92
COPS3-204ENST00000462236 HRO43593 1189 aa9.28□□□□□ -0.92
COPS3-204ENST00000462236 SLF2Q8IX21 1173 aa9.28□□□□□ -0.92
COPS3-204ENST00000462236 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
COPS3-204ENST00000462236 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
COPS3-204ENST00000462236 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
COPS3-204ENST00000462236 SKIV2LQ15477 1246 aaKnown RBP9.27□□□□□ -0.93
COPS3-204ENST00000462236 DDX11L8A8MPP1 907 aa9.26□□□□□ -0.93
COPS3-204ENST00000462236 SWT1Q5T5J6 900 aaKnown RBP9.26□□□□□ -0.93
COPS3-204ENST00000462236 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
COPS3-204ENST00000462236 GJA5P36382 358 aa9.25□□□□□ -0.93
COPS3-204ENST00000462236 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
COPS3-204ENST00000462236 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
COPS3-204ENST00000462236 USP46P62068 366 aa9.24□□□□□ -0.93
COPS3-204ENST00000462236 CHD1O14646 1710 aa9.23□□□□□ -0.93
COPS3-204ENST00000462236 TUSC1Q2TAM9 212 aa9.23□□□□□ -0.93
COPS3-204ENST00000462236 NUTM1Q86Y26 1132 aa9.23□□□□□ -0.93
COPS3-204ENST00000462236 RDH13Q8NBN7 331 aa9.23□□□□□ -0.93
COPS3-204ENST00000462236 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
COPS3-204ENST00000462236 GCGRP47871 477 aa9.22□□□□□ -0.93
COPS3-204ENST00000462236 MYSM1Q5VVJ2 828 aa9.22□□□□□ -0.93
COPS3-204ENST00000462236 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
COPS3-204ENST00000462236 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
COPS3-204ENST00000462236 ZNF608Q9ULD9 1512 aaPredicted RBP9.21□□□□□ -0.93
COPS3-204ENST00000462236 SPIRE2Q8WWL2 714 aa9.21□□□□□ -0.94
COPS3-204ENST00000462236 LRCH3Q96II8 777 aa9.21□□□□□ -0.94
COPS3-204ENST00000462236 POTEMA6NI47 508 aa9.2□□□□□ -0.94
COPS3-204ENST00000462236 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
COPS3-204ENST00000462236 ANKK1Q8NFD2 765 aa9.2□□□□□ -0.94
COPS3-204ENST00000462236 ARAP1Q96P48 1450 aa9.2□□□□□ -0.94
COPS3-204ENST00000462236 KDM4AO75164 1064 aa9.19□□□□□ -0.94
COPS3-204ENST00000462236 SLC10A3P09131 477 aa9.19□□□□□ -0.94
COPS3-204ENST00000462236 PRR14Q9BWN1 585 aa9.19□□□□□ -0.94
COPS3-204ENST00000462236 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
COPS3-204ENST00000462236 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
COPS3-204ENST00000462236 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
COPS3-204ENST00000462236 IFT140Q96RY7 1462 aa9.19□□□□□ -0.94
COPS3-204ENST00000462236 EIF4G3O43432 1585 aaKnown RBP9.19□□□□□ -0.94
COPS3-204ENST00000462236 SPTLC1O15269 473 aa9.18□□□□□ -0.94
COPS3-204ENST00000462236 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
COPS3-204ENST00000462236 CLK2P49760 499 aaKnown RBP9.18□□□□□ -0.94
COPS3-204ENST00000462236 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
COPS3-204ENST00000462236 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
COPS3-204ENST00000462236 RIC3Q7Z5B4 369 aa9.17□□□□□ -0.94
COPS3-204ENST00000462236 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms