RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 IQGAP1P46940 1657 aa35.18■■■■□ 3.22
CDH23-208ENST00000461841 PREX1Q8TCU6 1659 aa35.18■■■■□ 3.22
CDH23-208ENST00000461841 IDI1Q13907 227 aa35.18■■■■□ 3.22
CDH23-208ENST00000461841 SLC52A1Q9NWF4 448 aa35.18■■■■□ 3.22
CDH23-208ENST00000461841 RPGRIP1LQ68CZ1 1315 aa35.18■■■■□ 3.22
CDH23-208ENST00000461841 CFAP70Q5T0N1 1121 aa35.16■■■■□ 3.22
CDH23-208ENST00000461841 PPLO60437 1756 aa35.16■■■■□ 3.22
CDH23-208ENST00000461841 PRKRIP1Q9H875 184 aaPredicted RBP35.16■■■■□ 3.22
CDH23-208ENST00000461841 SCAF11Q99590 1463 aaKnown RBP35.15■■■■□ 3.22
CDH23-208ENST00000461841 FBXO31Q5XUX0 539 aaPredicted RBP35.13■■■■□ 3.21
CDH23-208ENST00000461841 MLECQ14165 292 aa35.12■■■■□ 3.21
CDH23-208ENST00000461841 CLTCQ00610 1675 aaKnown RBP35.11■■■■□ 3.21
CDH23-208ENST00000461841 DISP3Q9P2K9 1392 aa35.1■■■■□ 3.21
CDH23-208ENST00000461841 ERVK-7P63135 1459 aa35.08■■■■□ 3.21
CDH23-208ENST00000461841 PIK3C2GO75747 1445 aa35.07■■■■□ 3.21
CDH23-208ENST00000461841 TMF1P82094 1093 aa35.06■■■■□ 3.2
CDH23-208ENST00000461841 NEXMIFQ5QGS0 1516 aa35.04■■■■□ 3.2
CDH23-208ENST00000461841 C14orf93Q9H972 538 aaKnown RBP35.02■■■■□ 3.2
CDH23-208ENST00000461841 EIF3AQ14152 1382 aaKnown RBP35.01■■■■□ 3.2
CDH23-208ENST00000461841 TMEM131LA2VDJ0 1609 aa35.01■■■■□ 3.2
CDH23-208ENST00000461841 VGFO15240 615 aaPredicted RBP35.01■■■■□ 3.19
CDH23-208ENST00000461841 TRHP20396 242 aaPredicted RBP35.01■■■■□ 3.19
CDH23-208ENST00000461841 SCAF1Q9H7N4 1312 aaKnown RBP35■■■■□ 3.19
CDH23-208ENST00000461841 SETBP1Q9Y6X0 1596 aa34.99■■■■□ 3.19
CDH23-208ENST00000461841 NUTM2DQ5VT03 806 aaPredicted RBP34.96■■■■□ 3.19
CDH23-208ENST00000461841 MYO5BQ9ULV0 1848 aa34.96■■■■□ 3.19
CDH23-208ENST00000461841 SPATA31D1Q6ZQQ2 1576 aa34.96■■■■□ 3.19
CDH23-208ENST00000461841 CCDC184Q52MB2 194 aa34.94■■■■□ 3.18
CDH23-208ENST00000461841 ZFYVE9O95405 1425 aa34.94■■■■□ 3.18
CDH23-208ENST00000461841 ESF1Q9H501 851 aaKnown RBP34.94■■■■□ 3.18
CDH23-208ENST00000461841 ZMYM3Q14202 1370 aa34.92■■■■□ 3.18
CDH23-208ENST00000461841 ADGRB1O14514 1584 aa34.91■■■■□ 3.18
CDH23-208ENST00000461841 PER1O15534 1290 aaPredicted RBP34.86■■■■□ 3.17
CDH23-208ENST00000461841 CNGB1Q14028 1251 aaPredicted RBP34.86■■■■□ 3.17
CDH23-208ENST00000461841 CDCA8Q53HL2 280 aa34.86■■■■□ 3.17
CDH23-208ENST00000461841 TMEM132EQ6IEE7 984 aa34.86■■■■□ 3.17
CDH23-208ENST00000461841 SLC24A1O60721 1099 aa34.84■■■■□ 3.17
CDH23-208ENST00000461841 STAG3Q9UJ98 1225 aa34.84■■■■□ 3.17
CDH23-208ENST00000461841 MRS2Q9HD23 443 aa34.84■■■■□ 3.17
CDH23-208ENST00000461841 MYO3AQ8NEV4 1616 aa34.83■■■■□ 3.17
CDH23-208ENST00000461841 GTF3C3Q9Y5Q9 886 aa34.82■■■■□ 3.17
CDH23-208ENST00000461841 PANK3Q9H999 370 aa34.82■■■■□ 3.16
CDH23-208ENST00000461841 TRAK1Q9UPV9 953 aa34.82■■■■□ 3.16
CDH23-208ENST00000461841 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
CDH23-208ENST00000461841 A2ML1A8K2U0 1454 aa34.79■■■■□ 3.16
CDH23-208ENST00000461841 SBNO2Q9Y2G9 1366 aa34.79■■■■□ 3.16
CDH23-208ENST00000461841 CENPJQ9HC77 1338 aaPredicted RBP34.78■■■■□ 3.16
CDH23-208ENST00000461841 KTN1Q86UP2 1357 aaKnown RBP34.78■■■■□ 3.16
CDH23-208ENST00000461841 RALBP1Q15311 655 aa34.75■■■■□ 3.15
CDH23-208ENST00000461841 KDM5AP29375 1690 aaKnown RBP34.71■■■■□ 3.15
CDH23-208ENST00000461841 SENP3Q9H4L4 574 aaPredicted RBP34.69■■■■□ 3.14
CDH23-208ENST00000461841 FAM9BQ8IZU0 186 aa34.69■■■■□ 3.14
CDH23-208ENST00000461841 TNRQ92752 1358 aa34.69■■■■□ 3.14
CDH23-208ENST00000461841 PARD3Q8TEW0 1356 aa34.68■■■■□ 3.14
CDH23-208ENST00000461841 MYOM1P52179 1685 aa34.68■■■■□ 3.14
CDH23-208ENST00000461841 ASXL1Q8IXJ9 1541 aa34.67■■■■□ 3.14
CDH23-208ENST00000461841 RIMS2Q9UQ26 1411 aa34.67■■■■□ 3.14
CDH23-208ENST00000461841 QRICH2Q9H0J4 1663 aa34.67■■■■□ 3.14
CDH23-208ENST00000461841 MYBBP1AQ9BQG0 1328 aaKnown RBP34.66■■■■□ 3.14
CDH23-208ENST00000461841 HNRNPUQ00839 825 aaKnown RBP eCLIP34.65■■■■□ 3.14
CDH23-208ENST00000461841 ARHGEF28Q8N1W1 1705 aaKnown RBP34.64■■■■□ 3.14
CDH23-208ENST00000461841 ALKQ9UM73 1620 aa34.63■■■■□ 3.13
CDH23-208ENST00000461841 CC2D1BQ5T0F9 858 aaKnown RBP34.6■■■■□ 3.13
CDH23-208ENST00000461841 TMC1Q8TDI8 760 aa34.59■■■■□ 3.13
CDH23-208ENST00000461841 KNSTRNQ9Y448 316 aa34.59■■■■□ 3.13
CDH23-208ENST00000461841 BRD4O60885 1362 aaPredicted RBP34.58■■■■□ 3.13
CDH23-208ENST00000461841 STK26Q9P289 416 aa34.58■■■■□ 3.13
CDH23-208ENST00000461841 CEBPAP49715 358 aaPredicted RBP34.57■■■■□ 3.13
CDH23-208ENST00000461841 YTHDC2Q9H6S0 1430 aaKnown RBP34.56■■■■□ 3.12
CDH23-208ENST00000461841 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.55■■■■□ 3.12
CDH23-208ENST00000461841 PNISRQ8TF01 805 aaKnown RBP34.55■■■■□ 3.12
CDH23-208ENST00000461841 AMER1Q5JTC6 1135 aaPredicted RBP34.54■■■■□ 3.12
CDH23-208ENST00000461841 NLRP13Q86W25 1043 aa34.54■■■■□ 3.12
CDH23-208ENST00000461841 PTPRMP28827 1452 aa34.52■■■■□ 3.12
CDH23-208ENST00000461841 UBR1Q8IWV7 1749 aa34.51■■■■□ 3.12
CDH23-208ENST00000461841 FER1L4A9Z1Z3 1794 aa34.51■■■■□ 3.11
CDH23-208ENST00000461841 C3P01024 1663 aa34.5■■■■□ 3.11
CDH23-208ENST00000461841 EVC2Q86UK5 1308 aa34.49■■■■□ 3.11
CDH23-208ENST00000461841 HDGFP51858 240 aaKnown RBP34.48■■■■□ 3.11
CDH23-208ENST00000461841 NLRP1Q9C000 1473 aa34.48■■■■□ 3.11
CDH23-208ENST00000461841 PUS7Q96PZ0 661 aaKnown RBP34.48■■■■□ 3.11
CDH23-208ENST00000461841 TMEM2Q9UHN6 1383 aa34.48■■■■□ 3.11
CDH23-208ENST00000461841 SAFB2Q14151 953 aaKnown RBP eCLIP34.47■■■■□ 3.11
CDH23-208ENST00000461841 TULP4Q9NRJ4 1543 aa34.47■■■■□ 3.11
CDH23-208ENST00000461841 SETD1AO15047 1707 aaKnown RBP34.47■■■■□ 3.11
CDH23-208ENST00000461841 PRAM1Q96QH2 718 aa34.45■■■■□ 3.11
CDH23-208ENST00000461841 CARD14Q9BXL6 1004 aa34.45■■■■□ 3.11
CDH23-208ENST00000461841 NPC1L1Q9UHC9 1359 aa34.45■■■■□ 3.11
CDH23-208ENST00000461841 NRXN3Q9Y4C0 1643 aa34.45■■■■□ 3.11
CDH23-208ENST00000461841 SLC12A5Q9H2X9 1139 aa34.42■■■■□ 3.1
CDH23-208ENST00000461841 POGKQ9P215 609 aa34.42■■■■□ 3.1
CDH23-208ENST00000461841 LRPPRCP42704 1394 aaKnown RBP34.41■■■■□ 3.1
CDH23-208ENST00000461841 ZBED9Q6R2W3 1325 aa34.38■■■■□ 3.09
CDH23-208ENST00000461841 PLPPR3Q6T4P5 718 aa34.38■■■■□ 3.09
CDH23-208ENST00000461841 METP08581 1390 aa34.36■■■■□ 3.09
CDH23-208ENST00000461841 DLC1Q96QB1 1528 aa34.36■■■■□ 3.09
CDH23-208ENST00000461841 CABP2Q9NPB3 220 aa34.36■■■■□ 3.09
CDH23-208ENST00000461841 ABCC11Q96J66 1382 aa34.35■■■■□ 3.09
CDH23-208ENST00000461841 MINK1Q8N4C8 1332 aaPredicted RBP34.35■■■■□ 3.09
CDH23-208ENST00000461841 PPP2R1AP30153 589 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms