RNA–Protein interactions for RNA: ENST00000461720.5

COL11A1-206, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-206ENST00000461720 E9PCH4 1651 aa19.08■□□□□ 0.65
COL11A1-206ENST00000461720 PROSER2Q86WR7 435 aaPredicted RBP19.08■□□□□ 0.64
COL11A1-206ENST00000461720 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
COL11A1-206ENST00000461720 ILDR2Q71H61 639 aa19.07■□□□□ 0.64
COL11A1-206ENST00000461720 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
COL11A1-206ENST00000461720 TMEM131LA2VDJ0 1609 aa19.06■□□□□ 0.64
COL11A1-206ENST00000461720 ZFYVE9O95405 1425 aa19.06■□□□□ 0.64
COL11A1-206ENST00000461720 PLEKHG1Q9ULL1 1385 aa19.06■□□□□ 0.64
COL11A1-206ENST00000461720 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
COL11A1-206ENST00000461720 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
COL11A1-206ENST00000461720 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
COL11A1-206ENST00000461720 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
COL11A1-206ENST00000461720 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.63
COL11A1-206ENST00000461720 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.63
COL11A1-206ENST00000461720 SOCS7O14512 581 aa19■□□□□ 0.63
COL11A1-206ENST00000461720 TBX22Q9Y458 520 aa19■□□□□ 0.63
COL11A1-206ENST00000461720 NUTM2DQ5VT03 806 aaPredicted RBP18.99■□□□□ 0.63
COL11A1-206ENST00000461720 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
COL11A1-206ENST00000461720 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
COL11A1-206ENST00000461720 MED1Q15648 1581 aaPredicted RBP18.98■□□□□ 0.63
COL11A1-206ENST00000461720 MSH6P52701 1360 aa18.97■□□□□ 0.63
COL11A1-206ENST00000461720 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
COL11A1-206ENST00000461720 NAIPQ13075 1403 aa18.96■□□□□ 0.63
COL11A1-206ENST00000461720 FAM135BQ49AJ0 1406 aa18.96■□□□□ 0.63
COL11A1-206ENST00000461720 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
COL11A1-206ENST00000461720 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
COL11A1-206ENST00000461720 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
COL11A1-206ENST00000461720 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
COL11A1-206ENST00000461720 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
COL11A1-206ENST00000461720 TRIM52Q96A61 297 aa18.94■□□□□ 0.62
COL11A1-206ENST00000461720 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
COL11A1-206ENST00000461720 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
COL11A1-206ENST00000461720 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
COL11A1-206ENST00000461720 SLAIN2Q9P270 581 aa18.91■□□□□ 0.62
COL11A1-206ENST00000461720 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
COL11A1-206ENST00000461720 TRPM2O94759 1503 aa18.9■□□□□ 0.62
COL11A1-206ENST00000461720 ROBO1Q9Y6N7 1651 aa18.89■□□□□ 0.61
COL11A1-206ENST00000461720 AMOTL2Q9Y2J4 779 aa18.88■□□□□ 0.61
COL11A1-206ENST00000461720 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
COL11A1-206ENST00000461720 C19orf44Q9H6X5 657 aa18.86■□□□□ 0.61
COL11A1-206ENST00000461720 ATF3P18847 181 aa18.85■□□□□ 0.61
COL11A1-206ENST00000461720 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
COL11A1-206ENST00000461720 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
COL11A1-206ENST00000461720 KIF1BO60333 1816 aa18.84■□□□□ 0.61
COL11A1-206ENST00000461720 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
COL11A1-206ENST00000461720 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
COL11A1-206ENST00000461720 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
COL11A1-206ENST00000461720 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
COL11A1-206ENST00000461720 NRXN3Q9Y4C0 1643 aa18.79■□□□□ 0.6
COL11A1-206ENST00000461720 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
COL11A1-206ENST00000461720 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
COL11A1-206ENST00000461720 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
COL11A1-206ENST00000461720 METP08581 1390 aa18.78■□□□□ 0.6
COL11A1-206ENST00000461720 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
COL11A1-206ENST00000461720 JCADQ9P266 1359 aa18.76■□□□□ 0.59
COL11A1-206ENST00000461720 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
COL11A1-206ENST00000461720 DCCP43146 1447 aa18.75■□□□□ 0.59
COL11A1-206ENST00000461720 FOXD1Q16676 465 aa18.72■□□□□ 0.59
COL11A1-206ENST00000461720 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
COL11A1-206ENST00000461720 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
COL11A1-206ENST00000461720 RGS17Q9UGC6 210 aaPredicted RBP18.7■□□□□ 0.58
COL11A1-206ENST00000461720 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
COL11A1-206ENST00000461720 COL16A1Q07092 1604 aaPredicted RBP18.69■□□□□ 0.58
COL11A1-206ENST00000461720 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
COL11A1-206ENST00000461720 AHDC1Q5TGY3 1603 aaPredicted RBP18.68■□□□□ 0.58
COL11A1-206ENST00000461720 SPATA31A6Q5VVP1 1343 aa18.68■□□□□ 0.58
COL11A1-206ENST00000461720 PPLO60437 1756 aa18.67■□□□□ 0.58
COL11A1-206ENST00000461720 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
COL11A1-206ENST00000461720 MEX3CQ5U5Q3 659 aaKnown RBP18.66■□□□□ 0.58
COL11A1-206ENST00000461720 MST1RQ04912 1400 aa18.66■□□□□ 0.58
COL11A1-206ENST00000461720 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
COL11A1-206ENST00000461720 PTCH1Q13635 1447 aa18.65■□□□□ 0.58
COL11A1-206ENST00000461720 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.58
COL11A1-206ENST00000461720 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.57
COL11A1-206ENST00000461720 POTEAQ6S8J7 498 aa18.62■□□□□ 0.57
COL11A1-206ENST00000461720 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
COL11A1-206ENST00000461720 SETD1AO15047 1707 aaKnown RBP18.62■□□□□ 0.57
COL11A1-206ENST00000461720 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
COL11A1-206ENST00000461720 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
COL11A1-206ENST00000461720 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
COL11A1-206ENST00000461720 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
COL11A1-206ENST00000461720 ADGRF5Q8IZF2 1346 aa18.6■□□□□ 0.57
COL11A1-206ENST00000461720 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
COL11A1-206ENST00000461720 NUTM2BA6NNL0 878 aaPredicted RBP18.58■□□□□ 0.56
COL11A1-206ENST00000461720 NUTM2EB1AL46 878 aaPredicted RBP18.58■□□□□ 0.56
COL11A1-206ENST00000461720 ZNF772Q68DY9 489 aaPredicted RBP18.58■□□□□ 0.56
COL11A1-206ENST00000461720 NUTM2AQ8IVF1 878 aaPredicted RBP18.58■□□□□ 0.56
COL11A1-206ENST00000461720 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.56
COL11A1-206ENST00000461720 NHSL1Q5SYE7 1610 aa18.57■□□□□ 0.56
COL11A1-206ENST00000461720 LRP6O75581 1613 aa18.56■□□□□ 0.56
COL11A1-206ENST00000461720 STK26Q9P289 416 aa18.56■□□□□ 0.56
COL11A1-206ENST00000461720 RAB3GAP2Q9H2M9 1393 aa18.55■□□□□ 0.56
COL11A1-206ENST00000461720 DDX17Q92841 729 aaKnown RBP18.54■□□□□ 0.56
COL11A1-206ENST00000461720 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
COL11A1-206ENST00000461720 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
COL11A1-206ENST00000461720 PIK3C2GO75747 1445 aa18.52■□□□□ 0.56
COL11A1-206ENST00000461720 TMEM132EQ6IEE7 984 aa18.52■□□□□ 0.56
COL11A1-206ENST00000461720 ORAI2Q96SN7 254 aa18.52■□□□□ 0.56
COL11A1-206ENST00000461720 ABCC11Q96J66 1382 aa18.51■□□□□ 0.55
COL11A1-206ENST00000461720 TECPR2O15040 1411 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms