RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
NPHP1-209ENST00000461707 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
NPHP1-209ENST00000461707 DLC1Q96QB1 1528 aa10.38□□□□□ -0.75
NPHP1-209ENST00000461707 C3P01024 1663 aa10.38□□□□□ -0.75
NPHP1-209ENST00000461707 HSPA5P11021 654 aaKnown RBP10.37□□□□□ -0.75
NPHP1-209ENST00000461707 NLRP1Q9C000 1473 aa10.37□□□□□ -0.75
NPHP1-209ENST00000461707 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
NPHP1-209ENST00000461707 CCDC144AA2RUR9 1427 aa10.37□□□□□ -0.75
NPHP1-209ENST00000461707 NPC1L1Q9UHC9 1359 aa10.37□□□□□ -0.75
NPHP1-209ENST00000461707 LRRC7Q96NW7 1537 aa10.36□□□□□ -0.75
NPHP1-209ENST00000461707 TULP4Q9NRJ4 1543 aa10.36□□□□□ -0.75
NPHP1-209ENST00000461707 CCDC184Q52MB2 194 aa10.35□□□□□ -0.75
NPHP1-209ENST00000461707 CFDP1Q9UEE9 299 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-209ENST00000461707 NUP155O75694 1391 aa10.35□□□□□ -0.75
NPHP1-209ENST00000461707 PHRF1Q9P1Y6 1649 aaKnown RBP10.35□□□□□ -0.75
NPHP1-209ENST00000461707 ADGRL1O94910 1474 aa10.34□□□□□ -0.75
NPHP1-209ENST00000461707 CRYBG1Q9Y4K1 1723 aa10.34□□□□□ -0.75
NPHP1-209ENST00000461707 CPS1P31327 1500 aa10.34□□□□□ -0.75
NPHP1-209ENST00000461707 TESK2Q96S53 571 aa10.33□□□□□ -0.76
NPHP1-209ENST00000461707 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
NPHP1-209ENST00000461707 TUBGCP6Q96RT7 1819 aa10.33□□□□□ -0.76
NPHP1-209ENST00000461707 BCANQ96GW7 911 aa10.33□□□□□ -0.76
NPHP1-209ENST00000461707 NPATQ14207 1427 aa10.33□□□□□ -0.76
NPHP1-209ENST00000461707 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
NPHP1-209ENST00000461707 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
NPHP1-209ENST00000461707 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
NPHP1-209ENST00000461707 CD163L1Q9NR16 1453 aa10.32□□□□□ -0.76
NPHP1-209ENST00000461707 XRN1Q8IZH2 1706 aaKnown RBP10.32□□□□□ -0.76
NPHP1-209ENST00000461707 PTPRMP28827 1452 aa10.32□□□□□ -0.76
NPHP1-209ENST00000461707 MED14O60244 1454 aa10.3□□□□□ -0.76
NPHP1-209ENST00000461707 HNRNPMP52272 730 aaKnown RBP eCLIP10.3□□□□□ -0.76
NPHP1-209ENST00000461707 ANP32CO43423 234 aa10.3□□□□□ -0.76
NPHP1-209ENST00000461707 CDK11AQ9UQ88 783 aaPredicted RBP10.3□□□□□ -0.76
NPHP1-209ENST00000461707 CNGB1Q14028 1251 aaPredicted RBP10.29□□□□□ -0.76
NPHP1-209ENST00000461707 SCAF11Q99590 1463 aaKnown RBP10.29□□□□□ -0.76
NPHP1-209ENST00000461707 CAMTA1Q9Y6Y1 1673 aa10.28□□□□□ -0.76
NPHP1-209ENST00000461707 USP47Q96K76 1375 aa10.28□□□□□ -0.76
NPHP1-209ENST00000461707 ROCK2O75116 1388 aaKnown RBP10.28□□□□□ -0.76
NPHP1-209ENST00000461707 SMG6Q86US8 1419 aaKnown RBP10.27□□□□□ -0.77
NPHP1-209ENST00000461707 PKD2Q13563 968 aa10.27□□□□□ -0.77
NPHP1-209ENST00000461707 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
NPHP1-209ENST00000461707 FMN2Q9NZ56 1722 aa10.27□□□□□ -0.77
NPHP1-209ENST00000461707 LRRC37A3O60309 1634 aa10.27□□□□□ -0.77
NPHP1-209ENST00000461707 PLEKHD1A6NEE1 506 aa10.27□□□□□ -0.77
NPHP1-209ENST00000461707 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
NPHP1-209ENST00000461707 EIF4G2P78344 907 aaKnown RBP eCLIP10.26□□□□□ -0.77
NPHP1-209ENST00000461707 FKBP8Q14318 412 aa10.25□□□□□ -0.77
NPHP1-209ENST00000461707 DISP3Q9P2K9 1392 aa10.24□□□□□ -0.77
NPHP1-209ENST00000461707 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
NPHP1-209ENST00000461707 FER1L4A9Z1Z3 1794 aa10.23□□□□□ -0.77
NPHP1-209ENST00000461707 ALKQ9UM73 1620 aa10.23□□□□□ -0.77
NPHP1-209ENST00000461707 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
NPHP1-209ENST00000461707 ADAMTS7Q9UKP4 1686 aa10.22□□□□□ -0.77
NPHP1-209ENST00000461707 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
NPHP1-209ENST00000461707 TECPR2O15040 1411 aa10.22□□□□□ -0.77
NPHP1-209ENST00000461707 DLG5Q8TDM6 1919 aa10.22□□□□□ -0.77
NPHP1-209ENST00000461707 WASHC2CQ9Y4E1 1318 aa10.22□□□□□ -0.77
NPHP1-209ENST00000461707 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.77
NPHP1-209ENST00000461707 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.21□□□□□ -0.77
NPHP1-209ENST00000461707 IRX6P78412 446 aaPredicted RBP10.21□□□□□ -0.77
NPHP1-209ENST00000461707 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.78
NPHP1-209ENST00000461707 ZNF521Q96K83 1311 aa10.21□□□□□ -0.78
NPHP1-209ENST00000461707 ITSN1Q15811 1721 aa10.2□□□□□ -0.78
NPHP1-209ENST00000461707 HNRNPUQ00839 825 aaKnown RBP eCLIP10.2□□□□□ -0.78
NPHP1-209ENST00000461707 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
NPHP1-209ENST00000461707 SLIT1O75093 1534 aa10.2□□□□□ -0.78
NPHP1-209ENST00000461707 ADAMTSL3P82987 1691 aa10.19□□□□□ -0.78
NPHP1-209ENST00000461707 BRD4O60885 1362 aaPredicted RBP10.18□□□□□ -0.78
NPHP1-209ENST00000461707 TSHZ2Q9NRE2 1034 aa10.18□□□□□ -0.78
NPHP1-209ENST00000461707 FAM9BQ8IZU0 186 aa10.17□□□□□ -0.78
NPHP1-209ENST00000461707 ARHGAP23Q9P227 1491 aa10.17□□□□□ -0.78
NPHP1-209ENST00000461707 ZBED9Q6R2W3 1325 aa10.16□□□□□ -0.78
NPHP1-209ENST00000461707 CHD2O14647 1828 aaKnown RBP10.16□□□□□ -0.78
NPHP1-209ENST00000461707 LMO7Q8WWI1 1683 aa10.16□□□□□ -0.78
NPHP1-209ENST00000461707 TSPY4P0CV99 314 aa10.16□□□□□ -0.78
NPHP1-209ENST00000461707 TSPY10P0CW01 314 aa10.16□□□□□ -0.78
NPHP1-209ENST00000461707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
NPHP1-209ENST00000461707 PEAK1Q9H792 1746 aa10.16□□□□□ -0.78
NPHP1-209ENST00000461707 SIPA1L3O60292 1781 aaPredicted RBP10.15□□□□□ -0.78
NPHP1-209ENST00000461707 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.79
NPHP1-209ENST00000461707 CD109Q6YHK3 1445 aa10.14□□□□□ -0.79
NPHP1-209ENST00000461707 RGL3Q3MIN7 710 aa10.14□□□□□ -0.79
NPHP1-209ENST00000461707 NWD1Q149M9 1564 aa10.14□□□□□ -0.79
NPHP1-209ENST00000461707 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
NPHP1-209ENST00000461707 PUS7Q96PZ0 661 aaKnown RBP10.13□□□□□ -0.79
NPHP1-209ENST00000461707 A2ML1A8K2U0 1454 aa10.13□□□□□ -0.79
NPHP1-209ENST00000461707 PIK3C2AO00443 1686 aa10.13□□□□□ -0.79
NPHP1-209ENST00000461707 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
NPHP1-209ENST00000461707 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
NPHP1-209ENST00000461707 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
NPHP1-209ENST00000461707 TRMT2AQ8IZ69 625 aaKnown RBP10.12□□□□□ -0.79
NPHP1-209ENST00000461707 LMTK3Q96Q04 1460 aa10.12□□□□□ -0.79
NPHP1-209ENST00000461707 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
NPHP1-209ENST00000461707 NCBP3Q53F19 620 aaKnown RBP10.11□□□□□ -0.79
NPHP1-209ENST00000461707 TRPM3Q9HCF6 1732 aaPredicted RBP10.11□□□□□ -0.79
NPHP1-209ENST00000461707 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
NPHP1-209ENST00000461707 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
NPHP1-209ENST00000461707 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
NPHP1-209ENST00000461707 KANK1Q14678 1352 aa10.1□□□□□ -0.79
NPHP1-209ENST00000461707 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms