RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TSPOAP1O95153 1857 aa10.13□□□□□ -0.79
SPTA1-202ENST00000461624 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
SPTA1-202ENST00000461624 FBXO41Q8TF61 875 aa10.12□□□□□ -0.79
SPTA1-202ENST00000461624 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
SPTA1-202ENST00000461624 PTPN5P54829 565 aa10.11□□□□□ -0.79
SPTA1-202ENST00000461624 E2F4Q16254 413 aa10.11□□□□□ -0.79
SPTA1-202ENST00000461624 PROX2Q3B8N5 592 aa10.11□□□□□ -0.79
SPTA1-202ENST00000461624 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
SPTA1-202ENST00000461624 PPRC1Q5VV67 1664 aaKnown RBP10.11□□□□□ -0.79
SPTA1-202ENST00000461624 PRG4Q92954 1404 aaPredicted RBP10.1□□□□□ -0.79
SPTA1-202ENST00000461624 LAPTM4BQ86VI4 370 aa10.1□□□□□ -0.79
SPTA1-202ENST00000461624 DDX12PQ92771 950 aa10.1□□□□□ -0.79
SPTA1-202ENST00000461624 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
SPTA1-202ENST00000461624 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
SPTA1-202ENST00000461624 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
SPTA1-202ENST00000461624 NBR1Q14596 966 aa10.06□□□□□ -0.8
SPTA1-202ENST00000461624 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
SPTA1-202ENST00000461624 RBM33Q96EV2 1170 aaKnown RBP10.06□□□□□ -0.8
SPTA1-202ENST00000461624 FHAD1B1AJZ9 1412 aa10.06□□□□□ -0.8
SPTA1-202ENST00000461624 COL17A1Q9UMD9 1497 aaPredicted RBP10.05□□□□□ -0.8
SPTA1-202ENST00000461624 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
SPTA1-202ENST00000461624 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
SPTA1-202ENST00000461624 RUSC2Q8N2Y8 1516 aa10.04□□□□□ -0.8
SPTA1-202ENST00000461624 MAP3K7O43318 606 aa10.03□□□□□ -0.8
SPTA1-202ENST00000461624 LMTK3Q96Q04 1460 aa10.03□□□□□ -0.8
SPTA1-202ENST00000461624 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
SPTA1-202ENST00000461624 GLI2P10070 1586 aa10.01□□□□□ -0.81
SPTA1-202ENST00000461624 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
SPTA1-202ENST00000461624 ZFRQ96KR1 1074 aaKnown RBP10.01□□□□□ -0.81
SPTA1-202ENST00000461624 ERICH3Q5RHP9 1530 aa10.01□□□□□ -0.81
SPTA1-202ENST00000461624 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
SPTA1-202ENST00000461624 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
SPTA1-202ENST00000461624 CERKQ8TCT0 537 aa10□□□□□ -0.81
SPTA1-202ENST00000461624 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
SPTA1-202ENST00000461624 PACS2Q86VP3 889 aa9.98□□□□□ -0.81
SPTA1-202ENST00000461624 SEPT9Q9UHD8 586 aaPredicted RBP9.98□□□□□ -0.81
SPTA1-202ENST00000461624 BCAMP50895 628 aa9.97□□□□□ -0.81
SPTA1-202ENST00000461624 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
SPTA1-202ENST00000461624 TOP2BQ02880 1626 aa9.96□□□□□ -0.82
SPTA1-202ENST00000461624 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
SPTA1-202ENST00000461624 SOCS7O14512 581 aa9.95□□□□□ -0.82
SPTA1-202ENST00000461624 RGS20O76081 388 aa9.95□□□□□ -0.82
SPTA1-202ENST00000461624 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
SPTA1-202ENST00000461624 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
SPTA1-202ENST00000461624 MAP3K4Q9Y6R4 1608 aa9.95□□□□□ -0.82
SPTA1-202ENST00000461624 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-202ENST00000461624 PRSS12P56730 875 aa9.94□□□□□ -0.82
SPTA1-202ENST00000461624 A0A0G2JS52 829 aa9.93□□□□□ -0.82
SPTA1-202ENST00000461624 OSBPP22059 807 aa9.93□□□□□ -0.82
SPTA1-202ENST00000461624 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
SPTA1-202ENST00000461624 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
SPTA1-202ENST00000461624 LRCH3Q96II8 777 aa9.93□□□□□ -0.82
SPTA1-202ENST00000461624 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
SPTA1-202ENST00000461624 BIVM-ERCC5R4GMW8 1640 aa9.93□□□□□ -0.82
SPTA1-202ENST00000461624 ABCC2Q92887 1545 aa9.92□□□□□ -0.82
SPTA1-202ENST00000461624 ASXL2Q76L83 1435 aa9.92□□□□□ -0.82
SPTA1-202ENST00000461624 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
SPTA1-202ENST00000461624 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
SPTA1-202ENST00000461624 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
SPTA1-202ENST00000461624 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
SPTA1-202ENST00000461624 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
SPTA1-202ENST00000461624 EPRSP07814 1512 aaKnown RBP9.89□□□□□ -0.83
SPTA1-202ENST00000461624 HAP1P54257 671 aaPredicted RBP9.89□□□□□ -0.83
SPTA1-202ENST00000461624 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
SPTA1-202ENST00000461624 TSHZ2Q9NRE2 1034 aa9.89□□□□□ -0.83
SPTA1-202ENST00000461624 CUL7Q14999 1698 aa9.89□□□□□ -0.83
SPTA1-202ENST00000461624 KIAA0586Q9BVV6 1533 aa9.88□□□□□ -0.83
SPTA1-202ENST00000461624 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
SPTA1-202ENST00000461624 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
SPTA1-202ENST00000461624 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
SPTA1-202ENST00000461624 TEX14Q8IWB6 1497 aa9.87□□□□□ -0.83
SPTA1-202ENST00000461624 UHRF1BP1LA0JNW5 1464 aa9.86□□□□□ -0.83
SPTA1-202ENST00000461624 TATDN2Q93075 761 aa9.86□□□□□ -0.83
SPTA1-202ENST00000461624 KIF21BO75037 1637 aa9.85□□□□□ -0.83
SPTA1-202ENST00000461624 PCF11O94913 1555 aaKnown RBP9.85□□□□□ -0.83
SPTA1-202ENST00000461624 SLC24A1O60721 1099 aa9.85□□□□□ -0.83
SPTA1-202ENST00000461624 PNMA3Q9UL41 463 aa9.85□□□□□ -0.83
SPTA1-202ENST00000461624 ADAMTSL3P82987 1691 aa9.85□□□□□ -0.83
SPTA1-202ENST00000461624 PTPRGP23470 1445 aa9.84□□□□□ -0.83
SPTA1-202ENST00000461624 PTPRMP28827 1452 aa9.84□□□□□ -0.83
SPTA1-202ENST00000461624 KDM5BQ9UGL1 1544 aa9.83□□□□□ -0.84
SPTA1-202ENST00000461624 SMAPO00193 183 aa9.83□□□□□ -0.84
SPTA1-202ENST00000461624 KCNC4Q03721 635 aa9.83□□□□□ -0.84
SPTA1-202ENST00000461624 KCNV2Q8TDN2 545 aa9.83□□□□□ -0.84
SPTA1-202ENST00000461624 PPP4CP60510 307 aa9.82□□□□□ -0.84
SPTA1-202ENST00000461624 SAMD7Q7Z3H4 446 aa9.82□□□□□ -0.84
SPTA1-202ENST00000461624 TTC13Q8NBP0 860 aa9.82□□□□□ -0.84
SPTA1-202ENST00000461624 DISP3Q9P2K9 1392 aa9.82□□□□□ -0.84
SPTA1-202ENST00000461624 C3orf80F5H4A9 247 aa9.81□□□□□ -0.84
SPTA1-202ENST00000461624 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
SPTA1-202ENST00000461624 NPDC1Q9NQX5 325 aaPredicted RBP9.81□□□□□ -0.84
SPTA1-202ENST00000461624 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
SPTA1-202ENST00000461624 SPATA31D1Q6ZQQ2 1576 aa9.8□□□□□ -0.84
SPTA1-202ENST00000461624 ZCCHC11Q5TAX3 1644 aaKnown RBP9.79□□□□□ -0.84
SPTA1-202ENST00000461624 TNIKQ9UKE5 1360 aa9.79□□□□□ -0.84
SPTA1-202ENST00000461624 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
SPTA1-202ENST00000461624 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
SPTA1-202ENST00000461624 PADI6Q6TGC4 694 aa9.79□□□□□ -0.84
SPTA1-202ENST00000461624 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
SPTA1-202ENST00000461624 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms