RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 BCANQ96GW7 911 aa13.97□□□□□ -0.17
C9orf78-203ENST00000461539 LTKP29376 864 aa13.96□□□□□ -0.17
C9orf78-203ENST00000461539 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
C9orf78-203ENST00000461539 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
C9orf78-203ENST00000461539 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.18
C9orf78-203ENST00000461539 MYO3AQ8NEV4 1616 aa13.95□□□□□ -0.18
C9orf78-203ENST00000461539 NBPF8Q3BBV2 869 aa13.95□□□□□ -0.18
C9orf78-203ENST00000461539 NEURL4Q96JN8 1562 aa13.95□□□□□ -0.18
C9orf78-203ENST00000461539 TMEM131LA2VDJ0 1609 aa13.94□□□□□ -0.18
C9orf78-203ENST00000461539 ZFYVE9O95405 1425 aa13.94□□□□□ -0.18
C9orf78-203ENST00000461539 CFAP65Q6ZU64 1925 aaKnown RBP13.93□□□□□ -0.18
C9orf78-203ENST00000461539 MYOM2P54296 1465 aa13.92□□□□□ -0.18
C9orf78-203ENST00000461539 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
C9orf78-203ENST00000461539 NCKAP5LQ9HCH0 1330 aa13.91□□□□□ -0.18
C9orf78-203ENST00000461539 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
C9orf78-203ENST00000461539 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
C9orf78-203ENST00000461539 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
C9orf78-203ENST00000461539 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.18
C9orf78-203ENST00000461539 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
C9orf78-203ENST00000461539 SLIT1O75093 1534 aa13.9□□□□□ -0.19
C9orf78-203ENST00000461539 PLEKHG1Q9ULL1 1385 aa13.89□□□□□ -0.19
C9orf78-203ENST00000461539 C14orf93Q9H972 538 aaKnown RBP13.89□□□□□ -0.19
C9orf78-203ENST00000461539 NBPF1Q3BBV0 1214 aa13.88□□□□□ -0.19
C9orf78-203ENST00000461539 SLC26A8Q96RN1 970 aa13.88□□□□□ -0.19
C9orf78-203ENST00000461539 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
C9orf78-203ENST00000461539 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
C9orf78-203ENST00000461539 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
C9orf78-203ENST00000461539 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
C9orf78-203ENST00000461539 KIF1BO60333 1816 aa13.86□□□□□ -0.19
C9orf78-203ENST00000461539 TMEM132EQ6IEE7 984 aa13.86□□□□□ -0.19
C9orf78-203ENST00000461539 CARD11Q9BXL7 1154 aa13.86□□□□□ -0.19
C9orf78-203ENST00000461539 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
C9orf78-203ENST00000461539 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
C9orf78-203ENST00000461539 SETD1BQ9UPS6 1966 aaKnown RBP13.85□□□□□ -0.19
C9orf78-203ENST00000461539 KDM5AP29375 1690 aaKnown RBP13.85□□□□□ -0.19
C9orf78-203ENST00000461539 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
C9orf78-203ENST00000461539 ADAMTS13Q76LX8 1427 aa13.82□□□□□ -0.2
C9orf78-203ENST00000461539 RALGAPBQ86X10 1494 aa13.82□□□□□ -0.2
C9orf78-203ENST00000461539 STK26Q9P289 416 aa13.82□□□□□ -0.2
C9orf78-203ENST00000461539 METP08581 1390 aa13.81□□□□□ -0.2
C9orf78-203ENST00000461539 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
C9orf78-203ENST00000461539 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
C9orf78-203ENST00000461539 MED14O60244 1454 aa13.8□□□□□ -0.2
C9orf78-203ENST00000461539 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
C9orf78-203ENST00000461539 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
C9orf78-203ENST00000461539 EIF4G2P78344 907 aaKnown RBP eCLIP13.78□□□□□ -0.2
C9orf78-203ENST00000461539 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
C9orf78-203ENST00000461539 PPLO60437 1756 aa13.78□□□□□ -0.2
C9orf78-203ENST00000461539 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
C9orf78-203ENST00000461539 USP47Q96K76 1375 aa13.77□□□□□ -0.21
C9orf78-203ENST00000461539 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
C9orf78-203ENST00000461539 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
C9orf78-203ENST00000461539 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
C9orf78-203ENST00000461539 MYO5BQ9ULV0 1848 aa13.76□□□□□ -0.21
C9orf78-203ENST00000461539 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
C9orf78-203ENST00000461539 POGKQ9P215 609 aa13.75□□□□□ -0.21
C9orf78-203ENST00000461539 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
C9orf78-203ENST00000461539 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
C9orf78-203ENST00000461539 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
C9orf78-203ENST00000461539 KCNA6P17658 529 aa13.74□□□□□ -0.21
C9orf78-203ENST00000461539 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
C9orf78-203ENST00000461539 ADGRB1O14514 1584 aa13.74□□□□□ -0.21
C9orf78-203ENST00000461539 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
C9orf78-203ENST00000461539 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
C9orf78-203ENST00000461539 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.21
C9orf78-203ENST00000461539 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
C9orf78-203ENST00000461539 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
C9orf78-203ENST00000461539 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
C9orf78-203ENST00000461539 TRPM1Q7Z4N2 1603 aa13.72□□□□□ -0.21
C9orf78-203ENST00000461539 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
C9orf78-203ENST00000461539 DIP2AQ14689 1571 aa13.71□□□□□ -0.21
C9orf78-203ENST00000461539 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
C9orf78-203ENST00000461539 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
C9orf78-203ENST00000461539 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.22
C9orf78-203ENST00000461539 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
C9orf78-203ENST00000461539 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
C9orf78-203ENST00000461539 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
C9orf78-203ENST00000461539 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
C9orf78-203ENST00000461539 LAMC1P11047 1609 aa13.68□□□□□ -0.22
C9orf78-203ENST00000461539 TECPR2O15040 1411 aa13.68□□□□□ -0.22
C9orf78-203ENST00000461539 MINK1Q8N4C8 1332 aaPredicted RBP13.67□□□□□ -0.22
C9orf78-203ENST00000461539 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
C9orf78-203ENST00000461539 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
C9orf78-203ENST00000461539 FAM135BQ49AJ0 1406 aa13.66□□□□□ -0.22
C9orf78-203ENST00000461539 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
C9orf78-203ENST00000461539 TESK2Q96S53 571 aa13.66□□□□□ -0.22
C9orf78-203ENST00000461539 PTCH1Q13635 1447 aa13.65□□□□□ -0.22
C9orf78-203ENST00000461539 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
C9orf78-203ENST00000461539 TMF1P82094 1093 aa13.65□□□□□ -0.22
C9orf78-203ENST00000461539 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
C9orf78-203ENST00000461539 POLR1AO95602 1720 aaPredicted RBP13.64□□□□□ -0.23
C9orf78-203ENST00000461539 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
C9orf78-203ENST00000461539 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
C9orf78-203ENST00000461539 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
C9orf78-203ENST00000461539 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
C9orf78-203ENST00000461539 EVC2Q86UK5 1308 aa13.62□□□□□ -0.23
C9orf78-203ENST00000461539 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
C9orf78-203ENST00000461539 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
C9orf78-203ENST00000461539 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
C9orf78-203ENST00000461539 CPS1P31327 1500 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms